FFCP PHASE1:Hg19::chr16:53553449..53553474,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr16:53553449..53553474,-|id=chr16:53553449..53553474,-|ontology_enrichment_celltype=CL:0000738!7.13e-30!140;CL:0000791!1.15e-28!18;CL:0000789!1.15e-28!18;CL:0002420!1.15e-28!18;CL:0002419!1.15e-28!18;CL:0000790!1.15e-28!18;CL:0000625!2.12e-23!11;CL:0000084!1.48e-21!25;CL:0000827!1.48e-21!25;CL:0000037!1.93e-21!172;CL:0000566!1.93e-21!172;CL:0002087!4.40e-21!119;CL:0002032!9.63e-20!165;CL:0000837!9.63e-20!165;CL:0000988!1.97e-19!182;CL:0002031!1.82e-18!124;CL:0000838!2.15e-17!52;CL:0000542!6.25e-17!53;CL:0000051!6.25e-17!53;CL:0000094!5.10e-14!8;CL:0000766!7.87e-11!76;CL:0000081!8.51e-10!11;CL:0000775!4.52e-08!3;CL:0002057!4.75e-08!42;CL:0000623!9.98e-08!3;CL:0000825!9.98e-08!3;CL:0000860!2.90e-07!45|ontology_enrichment_celltype_v019=CL:0000625;1.50e-44;11!CL:0000791;2.48e-42;18!CL:0000789;2.48e-42;18!CL:0002419;2.48e-42;18!CL:0000094;5.01e-37;8!CL:0000084;4.56e-30;25!CL:0000081;7.91e-27;11!CL:0000775;1.04e-25;3!CL:0000623;2.93e-24;3!CL:0000771;8.34e-18;2!CL:0000542;1.01e-12;53!CL:0002541;9.32e-12;3!CL:0002127;1.21e-09;1!CL:0000911;1.21e-09;1!CL:0000814;1.21e-09;1!CL:0000895;1.49e-09;1|ontology_enrichment_celltype_v019_2=CL:0000625,1.34e-44,11;CL:0000791,2.43e-42,18;CL:0000789,2.43e-42,18;CL:0002420,2.43e-42,18;CL:0002419,2.43e-42,18;CL:0000790,2.43e-42,18;CL:0000094,4.86e-37,8;CL:0000084,4.49e-30,25;CL:0000827,4.49e-30,25;CL:0000081,7.74e-27,11;CL:0000775,1.04e-25,3;CL:0000623,1.96e-24,3;CL:0000825,1.96e-24,3;CL:0000838,1.96e-23,52;CL:0000542,5.98e-23,53;CL:0000051,5.98e-23,53;CL:0000738,5.36e-20,136;CL:0000771,8.35e-18,2;CL:0000893,2.07e-17,2;CL:0002489,2.07e-17,2;CL:0000809,2.07e-17,2;CL:0000808,2.07e-17,2;CL:0000894,2.07e-17,2;CL:0000806,2.07e-17,2;CL:0000807,2.07e-17,2;CL:0000805,2.07e-17,2;CL:0002425,2.07e-17,2;CL:0002032,2.25e-16,161;CL:0000837,2.25e-16,161;CL:0000037,1.50e-15,168;CL:0000988,1.38e-14,177;CL:0002541,9.32e-12,3;CL:0002087,7.57e-11,115;CL:0002031,2.69e-10,120;CL:0002127,1.21e-09,1;CL:0000914,1.21e-09,1;CL:0000911,1.21e-09,1;CL:0000814,1.21e-09,1;CL:0002042,1.21e-09,1;CL:0002039,1.21e-09,1;CL:0002040,1.21e-09,1;CL:0002041,1.21e-09,1;CL:0000810,1.69e-09,1;CL:0000895,1.69e-09,1;CL:0002436,1.69e-09,1;CL:0002427,1.69e-09,1;CL:0002428,1.69e-09,1;CL:0002429,1.69e-09,1;CL:0002433,1.69e-09,1;CL:0002431,1.69e-09,1;CL:0002432,1.69e-09,1;CL:0000134,3.05e-07,354;CL:0002320,5.02e-07,361|ontology_enrichment_development_v019=CL:0000790;2.48e-42;18!CL:0002425;1.83e-17;2!CL:0000051;1.01e-12;53!CL:0002427;1.49e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.23e-14!102;UBERON:0003061!6.23e-14!102;UBERON:0002193!7.16e-13!112;UBERON:0000178!5.77e-12!15;UBERON:0000179!5.77e-12!15;UBERON:0000463!5.77e-12!15;UBERON:0004177!3.02e-10!7;UBERON:0002370!3.93e-09!4;UBERON:0005058!3.93e-09!4;UBERON:0009113!3.93e-09!4;UBERON:0003295!3.93e-09!4;UBERON:0005562!3.93e-09!4|ontology_enrichment_uberon_v019=UBERON:0003124;9.32e-12;3!UBERON:0000920;9.32e-12;3|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.32e-12,3;UBERON:0002370,3.68e-09,4;UBERON:0005058,3.68e-09,4;UBERON:0009113,3.68e-09,4;UBERON:0003295,3.68e-09,4;UBERON:0005562,3.68e-09,4;UBERON:0002384,9.90e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,3.45446458287491,0.619264493264304,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.651032612147555,0,0,0.257575567634187,0,0.377875943688809,0,0.464858073811369,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,0,0.616804496998528,0,0,0,0,0.334231370655521,0.589211814949674,0,0.541607727530031,0.512365278902701,0.130059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0.296573126324121,0.802622484269139,0,1.13309342697566,3.06576394881537,2.06176467289578,2.78321661221453,1.91139248594458,3.25541726928209,0.950452044448374,0.903450714466637,1.53583933385302,1.24930726552346,2.36777252044017,0.821127996921047,2.21767417547206,2.94184215361858,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70757604772815,1.97030760201927,2.37190332345469,2.566860725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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr16:53553449..53553474,- | |||
|id=chr16:53553449..53553474,- | |||
|ontology_enrichment_celltype=CL:0000738!7.13e-30!140;CL:0000791!1.15e-28!18;CL:0000789!1.15e-28!18;CL:0002420!1.15e-28!18;CL:0002419!1.15e-28!18;CL:0000790!1.15e-28!18;CL:0000625!2.12e-23!11;CL:0000084!1.48e-21!25;CL:0000827!1.48e-21!25;CL:0000037!1.93e-21!172;CL:0000566!1.93e-21!172;CL:0002087!4.40e-21!119;CL:0002032!9.63e-20!165;CL:0000837!9.63e-20!165;CL:0000988!1.97e-19!182;CL:0002031!1.82e-18!124;CL:0000838!2.15e-17!52;CL:0000542!6.25e-17!53;CL:0000051!6.25e-17!53;CL:0000094!5.10e-14!8;CL:0000766!7.87e-11!76;CL:0000081!8.51e-10!11;CL:0000775!4.52e-08!3;CL:0002057!4.75e-08!42;CL:0000623!9.98e-08!3;CL:0000825!9.98e-08!3;CL:0000860!2.90e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.50e-44;11!CL:0000791;2.48e-42;18!CL:0000789;2.48e-42;18!CL:0002419;2.48e-42;18!CL:0000094;5.01e-37;8!CL:0000084;4.56e-30;25!CL:0000081;7.91e-27;11!CL:0000775;1.04e-25;3!CL:0000623;2.93e-24;3!CL:0000771;8.34e-18;2!CL:0000542;1.01e-12;53!CL:0002541;9.32e-12;3!CL:0002127;1.21e-09;1!CL:0000911;1.21e-09;1!CL:0000814;1.21e-09;1!CL:0000895;1.49e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.34e-44,11;CL:0000791,2.43e-42,18;CL:0000789,2.43e-42,18;CL:0002420,2.43e-42,18;CL:0002419,2.43e-42,18;CL:0000790,2.43e-42,18;CL:0000094,4.86e-37,8;CL:0000084,4.49e-30,25;CL:0000827,4.49e-30,25;CL:0000081,7.74e-27,11;CL:0000775,1.04e-25,3;CL:0000623,1.96e-24,3;CL:0000825,1.96e-24,3;CL:0000838,1.96e-23,52;CL:0000542,5.98e-23,53;CL:0000051,5.98e-23,53;CL:0000738,5.36e-20,136;CL:0000771,8.35e-18,2;CL:0000893,2.07e-17,2;CL:0002489,2.07e-17,2;CL:0000809,2.07e-17,2;CL:0000808,2.07e-17,2;CL:0000894,2.07e-17,2;CL:0000806,2.07e-17,2;CL:0000807,2.07e-17,2;CL:0000805,2.07e-17,2;CL:0002425,2.07e-17,2;CL:0002032,2.25e-16,161;CL:0000837,2.25e-16,161;CL:0000037,1.50e-15,168;CL:0000988,1.38e-14,177;CL:0002541,9.32e-12,3;CL:0002087,7.57e-11,115;CL:0002031,2.69e-10,120;CL:0002127,1.21e-09,1;CL:0000914,1.21e-09,1;CL:0000911,1.21e-09,1;CL:0000814,1.21e-09,1;CL:0002042,1.21e-09,1;CL:0002039,1.21e-09,1;CL:0002040,1.21e-09,1;CL:0002041,1.21e-09,1;CL:0000810,1.69e-09,1;CL:0000895,1.69e-09,1;CL:0002436,1.69e-09,1;CL:0002427,1.69e-09,1;CL:0002428,1.69e-09,1;CL:0002429,1.69e-09,1;CL:0002433,1.69e-09,1;CL:0002431,1.69e-09,1;CL:0002432,1.69e-09,1;CL:0000134,3.05e-07,354;CL:0002320,5.02e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;2.48e-42;18!CL:0002425;1.83e-17;2!CL:0000051;1.01e-12;53!CL:0002427;1.49e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.23e-14!102;UBERON:0003061!6.23e-14!102;UBERON:0002193!7.16e-13!112;UBERON:0000178!5.77e-12!15;UBERON:0000179!5.77e-12!15;UBERON:0000463!5.77e-12!15;UBERON:0004177!3.02e-10!7;UBERON:0002370!3.93e-09!4;UBERON:0005058!3.93e-09!4;UBERON:0009113!3.93e-09!4;UBERON:0003295!3.93e-09!4;UBERON:0005562!3.93e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.32e-12;3!UBERON:0000920;9.32e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.32e-12,3;UBERON:0002370,3.68e-09,4;UBERON:0005058,3.68e-09,4;UBERON:0009113,3.68e-09,4;UBERON:0003295,3.68e-09,4;UBERON:0005562,3.68e-09,4;UBERON:0002384,9.90e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,3.45446458287491,0.619264493264304,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.651032612147555,0,0,0.257575567634187,0,0.377875943688809,0,0.464858073811369,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,0,0.616804496998528,0,0,0,0,0.334231370655521,0.589211814949674,0,0.541607727530031,0.512365278902701,0.130059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0.296573126324121,0.802622484269139,0,1.13309342697566,3.06576394881537,2.06176467289578,2.78321661221453,1.91139248594458,3.25541726928209,0.950452044448374,0.903450714466637,1.53583933385302,1.24930726552346,2.36777252044017,0.821127996921047,2.21767417547206,2.94184215361858,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70757604772815,1.97030760201927,2.37190332345469,2.56686072559497,0,0,0.773288812777695,0,0,8.98808428736619,11.966458368161,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.714695326373367,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775066918032073,0.186224142887574,0,0.0636471582781649,0,0,0,0.673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr16:53553449..53553474,- | |||
}} |
Revision as of 10:42, 11 September 2013
Short description: | p@chr16:53553449..53553474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:53553449..53553474, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.32e-12 | 3 |
thymus | 3.68e-09 | 4 |
hemolymphoid system gland | 3.68e-09 | 4 |
thymic region | 3.68e-09 | 4 |
pharyngeal gland | 3.68e-09 | 4 |
thymus primordium | 3.68e-09 | 4 |
connective tissue | 9.90e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.