FFCP PHASE1:Hg19::chr17:1553184..1553204,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83547|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30266|TSSclassifier=S|UniProt=Q96NA2|association_with_transcript=147bp_to_ENST00000301336_5end|description=CAGE_peak_3_at_RILP_5end|id=chr17:1553184..1553204,-|ontology_enrichment_celltype=CL:0000839!1.69e-17!70;CL:0000763!9.91e-16!112;CL:0000049!9.91e-16!112;CL:0000557!2.50e-15!71;CL:0000766!5.84e-15!76;CL:0002194!1.73e-14!63;CL:0000576!1.73e-14!63;CL:0000040!1.73e-14!63;CL:0000559!1.73e-14!63;CL:0002009!2.95e-14!65;CL:0000860!2.83e-11!45;CL:0002057!8.15e-10!42|ontology_enrichment_celltype_v019=CL:0000764;4.86e-07;2!CL:0000558;4.86e-07;2|ontology_enrichment_celltype_v019_2=CL:0000763,1.25e-09,108;CL:0000049,1.25e-09,108;CL:0000839,1.48e-07,66;CL:0000764,4.89e-07,2;CL:0000765,4.89e-07,2;CL:0000050,4.89e-07,2;CL:0000038,4.89e-07,2;CL:0000558,4.89e-07,2;CL:0000547,4.89e-07,2;CL:0000549,4.89e-07,2;CL:0000550,4.89e-07,2;CL:0000552,4.89e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;9.70e-08;8|ontology_enrichment_disease_v019_2=DOID:1036,8.42e-08,8|ontology_enrichment_uberon=UBERON:0002390!1.51e-17!102;UBERON:0003061!1.51e-17!102;UBERON:0002193!1.31e-15!112;UBERON:0002405!1.55e-13!115;UBERON:0002371!3.80e-13!80;UBERON:0001474!5.03e-11!86;UBERON:0000926!3.01e-08!448;UBERON:0004120!3.01e-08!448;UBERON:0006603!3.01e-08!448;UBERON:0004765!5.13e-08!101;UBERON:0001434!5.13e-08!101;UBERON:0000178!1.75e-07!15;UBERON:0000179!1.75e-07!15;UBERON:0000463!1.75e-07!15;UBERON:0007023!2.08e-07!115;UBERON:0004921!4.93e-07!129;UBERON:0004185!4.93e-07!129|ontology_enrichment_uberon_v019=UBERON:0000178;7.52e-08;15!UBERON:0000179;7.52e-08;15!UBERON:0000463;7.52e-08;15!UBERON:0005409;1.26e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.53e-08,98;UBERON:0003061,2.53e-08,98;UBERON:0000178,5.08e-08,15;UBERON:0000179,5.08e-08,15;UBERON:0000463,5.08e-08,15;UBERON:0005409,5.48e-08,25;UBERON:0007023,2.72e-07,114;UBERON:0002193,4.72e-07,108|phase1_expression=0,0.428201047781966,0.563817616383885,0,1.78784437770915,0,0,0,2.35067065379855,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0.671746422719773,0.32389366601898,0.515151135268373,0.726991193897824,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,1.93645405075148,1.35426486594342,0.564727018627814,0.272906150057846,0.674170453335254,0.306083892370903,0,0,0.329851300186716,0.598390972864896,0.852449501065388,0.290209238628584,0,1.24564449799115,1.00499466102697,0,1.08594422352558,0,1.47311054395026,0.949387162322653,0.845021145247767,1.70083439972035,0.209658645508376,0.22465726229299,0,0,1.42506371870624,1.79025009479181,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,1.62273696827342,1.0447784237956,1.59549552622638,1.43094374583205,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.473227200159376,0.842923450390509,0.241011029883482,0.220587945464788,0.653638332277218,0.474541238222193,0.808987848960987,0.784885860501384,0.769494313892781,0,0,0.4115740113314,0,7.60530208930985,5.89696330006576,3.54473944008842,0,1.22988438543114,0.171567810298526,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0.936017060556951,0.891786973732369,0,0,0,0,0,0,0,1.84901711427775,0.414656231081544,1.29707958075265,0.6312121671319,0.063497894292169,0,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.77039506583738,11.2417243940707,0,0,0,2.16386124460217,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,2.54188262097304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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83547 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30266 | |||
|TSSclassifier=S | |||
|UniProt=Q96NA2 | |||
|association_with_transcript=147bp_to_ENST00000301336_5end | |||
|description=CAGE_peak_3_at_RILP_5end | |||
|id=chr17:1553184..1553204,- | |||
|ontology_enrichment_celltype=CL:0000839!1.69e-17!70;CL:0000763!9.91e-16!112;CL:0000049!9.91e-16!112;CL:0000557!2.50e-15!71;CL:0000766!5.84e-15!76;CL:0002194!1.73e-14!63;CL:0000576!1.73e-14!63;CL:0000040!1.73e-14!63;CL:0000559!1.73e-14!63;CL:0002009!2.95e-14!65;CL:0000860!2.83e-11!45;CL:0002057!8.15e-10!42 | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.86e-07;2!CL:0000558;4.86e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.25e-09,108;CL:0000049,1.25e-09,108;CL:0000839,1.48e-07,66;CL:0000764,4.89e-07,2;CL:0000765,4.89e-07,2;CL:0000050,4.89e-07,2;CL:0000038,4.89e-07,2;CL:0000558,4.89e-07,2;CL:0000547,4.89e-07,2;CL:0000549,4.89e-07,2;CL:0000550,4.89e-07,2;CL:0000552,4.89e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;9.70e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,8.42e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-17!102;UBERON:0003061!1.51e-17!102;UBERON:0002193!1.31e-15!112;UBERON:0002405!1.55e-13!115;UBERON:0002371!3.80e-13!80;UBERON:0001474!5.03e-11!86;UBERON:0000926!3.01e-08!448;UBERON:0004120!3.01e-08!448;UBERON:0006603!3.01e-08!448;UBERON:0004765!5.13e-08!101;UBERON:0001434!5.13e-08!101;UBERON:0000178!1.75e-07!15;UBERON:0000179!1.75e-07!15;UBERON:0000463!1.75e-07!15;UBERON:0007023!2.08e-07!115;UBERON:0004921!4.93e-07!129;UBERON:0004185!4.93e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.52e-08;15!UBERON:0000179;7.52e-08;15!UBERON:0000463;7.52e-08;15!UBERON:0005409;1.26e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.53e-08,98;UBERON:0003061,2.53e-08,98;UBERON:0000178,5.08e-08,15;UBERON:0000179,5.08e-08,15;UBERON:0000463,5.08e-08,15;UBERON:0005409,5.48e-08,25;UBERON:0007023,2.72e-07,114;UBERON:0002193,4.72e-07,108 | |||
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| |||
|short_description=p3@RILP | |||
}} |
Revision as of 12:21, 11 September 2013
Short description: | p3@RILP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RILP_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_ENST00000301336_5end |
EntrezGene: | RILP |
HGNC: | 30266 |
UniProt: | Q96NA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.25e-09 | 108 |
common myeloid progenitor | 1.25e-09 | 108 |
myeloid lineage restricted progenitor cell | 1.48e-07 | 66 |
erythroid lineage cell | 4.89e-07 | 2 |
erythroblast | 4.89e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.89e-07 | 2 |
erythroid progenitor cell | 4.89e-07 | 2 |
reticulocyte | 4.89e-07 | 2 |
proerythroblast | 4.89e-07 | 2 |
basophilic erythroblast | 4.89e-07 | 2 |
polychromatophilic erythroblast | 4.89e-07 | 2 |
orthochromatic erythroblast | 4.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.53e-08 | 98 |
blood island | 2.53e-08 | 98 |
blood | 5.08e-08 | 15 |
haemolymphatic fluid | 5.08e-08 | 15 |
organism substance | 5.08e-08 | 15 |
gastrointestinal system | 5.48e-08 | 25 |
adult organism | 2.72e-07 | 114 |
hemolymphoid system | 4.72e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 8.42e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.