FFCP PHASE1:Hg19::chr17:71088772..71088778,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=201266|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14463|TSSclassifier=S|UniProt=|association_with_transcript=36bp_to_uc002jjc.1_5end|description=CAGE_peak_3_at_SLC39A11_5end|id=chr17:71088772..71088778,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000235;4.04e-53;6!CL:0000228;5.16e-21;1!CL:0002372;5.16e-21;1!CL:0000473;6.05e-12;39!CL:0000234;6.05e-12;39|ontology_enrichment_celltype_v019_2=CL:0000235,6.05e-53,6;CL:0000228,4.22e-21,1;CL:0002372,4.22e-21,1;CL:0000839,1.30e-10,66;CL:0000473,1.82e-10,48;CL:0000234,1.82e-10,48;CL:0000557,1.87e-10,67;CL:0000766,9.90e-10,72;CL:0002194,2.17e-08,59;CL:0000576,2.17e-08,59;CL:0000040,2.17e-08,59;CL:0000559,2.17e-08,59;CL:0002009,4.02e-08,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.32e-22!57;UBERON:0005068!1.32e-22!57;UBERON:0006241!1.32e-22!57;UBERON:0007135!1.32e-22!57;UBERON:0000955!2.41e-21!69;UBERON:0006238!2.41e-21!69;UBERON:0002616!2.83e-21!59;UBERON:0001017!8.10e-21!82;UBERON:0005743!2.13e-20!86;UBERON:0000073!1.71e-19!94;UBERON:0001016!1.71e-19!94;UBERON:0007023!2.19e-18!115;UBERON:0002780!1.88e-17!41;UBERON:0001890!1.88e-17!41;UBERON:0006240!1.88e-17!41;UBERON:0003075!3.56e-17!86;UBERON:0007284!3.56e-17!86;UBERON:0002020!3.96e-17!34;UBERON:0003528!3.96e-17!34;UBERON:0003080!7.49e-17!42;UBERON:0001893!8.19e-17!34;UBERON:0002346!8.45e-17!90;UBERON:0002791!4.12e-16!33;UBERON:0000153!2.43e-15!129;UBERON:0007811!2.43e-15!129;UBERON:0000033!3.73e-15!123;UBERON:0001869!2.10e-14!32;UBERON:0003056!3.48e-13!61;UBERON:0004121!2.45e-12!169;UBERON:0000924!2.67e-12!173;UBERON:0006601!2.67e-12!173;UBERON:0002619!1.28e-11!22;UBERON:0001950!2.97e-11!20;UBERON:0000956!4.40e-11!25;UBERON:0000203!4.40e-11!25;UBERON:0002298!1.19e-09!8;UBERON:0000200!1.64e-08!6;UBERON:0002308!6.85e-08!9;UBERON:0000125!6.85e-08!9;UBERON:0003076!5.59e-07!15;UBERON:0003057!5.59e-07!15|ontology_enrichment_uberon_v019=UBERON:0002336;5.16e-21;1!UBERON:0002038;5.16e-21;1!UBERON:0011215;5.16e-21;1!UBERON:0001018;5.16e-21;1!UBERON:0009661;5.16e-21;1!UBERON:0002950;5.16e-21;1!UBERON:0002473;5.16e-21;1!UBERON:0005340;5.16e-21;1!UBERON:0003544;5.16e-21;1!UBERON:0005970;5.16e-21;1!UBERON:0002316;5.16e-21;1!UBERON:0001020;5.16e-21;1!UBERON:0001891;5.16e-21;1!UBERON:0002437;5.16e-21;1!UBERON:0001897;3.34e-11;2!UBERON:0005162;3.34e-11;2!UBERON:0000122;3.34e-11;2!UBERON:0010225;3.34e-11;2|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.45e-21,1;UBERON:0009661,3.45e-21,1;UBERON:0002950,3.45e-21,1;UBERON:0001891,3.45e-21,1;UBERON:0009616,3.45e-21,1;UBERON:0010286,3.45e-21,1;UBERON:0002336,7.72e-21,1;UBERON:0011215,7.72e-21,1;UBERON:0001018,7.72e-21,1;UBERON:0002473,7.72e-21,1;UBERON:0005340,7.72e-21,1;UBERON:0003544,7.72e-21,1;UBERON:0005970,7.72e-21,1;UBERON:0002316,7.72e-21,1;UBERON:0001020,7.72e-21,1;UBERON:0002437,7.72e-21,1;UBERON:0001897,2.47e-11,2;UBERON:0010225,2.47e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2;UBERON:0002371,3.22e-09,76;UBERON:0001474,1.53e-08,82;UBERON:0004765,8.88e-08,90;UBERON:0002405,1.59e-07,93;UBERON:0002390,3.90e-07,98;UBERON:0003061,3.90e-07,98;UBERON:0001434,5.44e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,2.80805118167085,1.0404181360211,0,0,0,0,0.290633938513962,0,0,2.0251139823042,0,0,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=201266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14463 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=36bp_to_uc002jjc.1_5end | |||
|description=CAGE_peak_3_at_SLC39A11_5end | |||
|id=chr17:71088772..71088778,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.04e-53;6!CL:0000228;5.16e-21;1!CL:0002372;5.16e-21;1!CL:0000473;6.05e-12;39!CL:0000234;6.05e-12;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.05e-53,6;CL:0000228,4.22e-21,1;CL:0002372,4.22e-21,1;CL:0000839,1.30e-10,66;CL:0000473,1.82e-10,48;CL:0000234,1.82e-10,48;CL:0000557,1.87e-10,67;CL:0000766,9.90e-10,72;CL:0002194,2.17e-08,59;CL:0000576,2.17e-08,59;CL:0000040,2.17e-08,59;CL:0000559,2.17e-08,59;CL:0002009,4.02e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.32e-22!57;UBERON:0005068!1.32e-22!57;UBERON:0006241!1.32e-22!57;UBERON:0007135!1.32e-22!57;UBERON:0000955!2.41e-21!69;UBERON:0006238!2.41e-21!69;UBERON:0002616!2.83e-21!59;UBERON:0001017!8.10e-21!82;UBERON:0005743!2.13e-20!86;UBERON:0000073!1.71e-19!94;UBERON:0001016!1.71e-19!94;UBERON:0007023!2.19e-18!115;UBERON:0002780!1.88e-17!41;UBERON:0001890!1.88e-17!41;UBERON:0006240!1.88e-17!41;UBERON:0003075!3.56e-17!86;UBERON:0007284!3.56e-17!86;UBERON:0002020!3.96e-17!34;UBERON:0003528!3.96e-17!34;UBERON:0003080!7.49e-17!42;UBERON:0001893!8.19e-17!34;UBERON:0002346!8.45e-17!90;UBERON:0002791!4.12e-16!33;UBERON:0000153!2.43e-15!129;UBERON:0007811!2.43e-15!129;UBERON:0000033!3.73e-15!123;UBERON:0001869!2.10e-14!32;UBERON:0003056!3.48e-13!61;UBERON:0004121!2.45e-12!169;UBERON:0000924!2.67e-12!173;UBERON:0006601!2.67e-12!173;UBERON:0002619!1.28e-11!22;UBERON:0001950!2.97e-11!20;UBERON:0000956!4.40e-11!25;UBERON:0000203!4.40e-11!25;UBERON:0002298!1.19e-09!8;UBERON:0000200!1.64e-08!6;UBERON:0002308!6.85e-08!9;UBERON:0000125!6.85e-08!9;UBERON:0003076!5.59e-07!15;UBERON:0003057!5.59e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;5.16e-21;1!UBERON:0002038;5.16e-21;1!UBERON:0011215;5.16e-21;1!UBERON:0001018;5.16e-21;1!UBERON:0009661;5.16e-21;1!UBERON:0002950;5.16e-21;1!UBERON:0002473;5.16e-21;1!UBERON:0005340;5.16e-21;1!UBERON:0003544;5.16e-21;1!UBERON:0005970;5.16e-21;1!UBERON:0002316;5.16e-21;1!UBERON:0001020;5.16e-21;1!UBERON:0001891;5.16e-21;1!UBERON:0002437;5.16e-21;1!UBERON:0001897;3.34e-11;2!UBERON:0005162;3.34e-11;2!UBERON:0000122;3.34e-11;2!UBERON:0010225;3.34e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.45e-21,1;UBERON:0009661,3.45e-21,1;UBERON:0002950,3.45e-21,1;UBERON:0001891,3.45e-21,1;UBERON:0009616,3.45e-21,1;UBERON:0010286,3.45e-21,1;UBERON:0002336,7.72e-21,1;UBERON:0011215,7.72e-21,1;UBERON:0001018,7.72e-21,1;UBERON:0002473,7.72e-21,1;UBERON:0005340,7.72e-21,1;UBERON:0003544,7.72e-21,1;UBERON:0005970,7.72e-21,1;UBERON:0002316,7.72e-21,1;UBERON:0001020,7.72e-21,1;UBERON:0002437,7.72e-21,1;UBERON:0001897,2.47e-11,2;UBERON:0010225,2.47e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2;UBERON:0002371,3.22e-09,76;UBERON:0001474,1.53e-08,82;UBERON:0004765,8.88e-08,90;UBERON:0002405,1.59e-07,93;UBERON:0002390,3.90e-07,98;UBERON:0003061,3.90e-07,98;UBERON:0001434,5.44e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,2.80805118167085,1.0404181360211,0,0,0,0,0.290633938513962,0,0,2.0251139823042,0,0,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0.997896857164083,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.784901281975124,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.14581926067151,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.443175571691151,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0.821432273351958,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0.886068179966986,0.122026264901963,0.3755727921195,0.573409195690071,0.776503360757966,0.496771223531068,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0.383683113910955,0.323474434190045,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,0.478901577171454,0,0,0.276629009856872,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0.620060389503552,0.760989722326882,0.546974809018219,0.548257766857182,0,0,0,0.535701835878287,0,0,0,0,0,0,0.339848664884159,0.394636641377094,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0.891139200981258,0,0,0,0,0.199882311849858,0,0,0,0,0,1.72007499781742,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75836092965222,0,0,0.0645889098360061,0.248298857183432,0,0.381882949668989,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SLC39A11 | |||
}} |
Revision as of 15:24, 11 September 2013
Short description: | p3@SLC39A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC39A11_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_uc002jjc.1_5end |
EntrezGene: | SLC39A11 |
HGNC: | 14463 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.05e-53 | 6 |
multinucleate cell | 4.22e-21 | 1 |
myotube | 4.22e-21 | 1 |
myeloid lineage restricted progenitor cell | 1.30e-10 | 66 |
defensive cell | 1.82e-10 | 48 |
phagocyte | 1.82e-10 | 48 |
granulocyte monocyte progenitor cell | 1.87e-10 | 67 |
myeloid leukocyte | 9.90e-10 | 72 |
monopoietic cell | 2.17e-08 | 59 |
monocyte | 2.17e-08 | 59 |
monoblast | 2.17e-08 | 59 |
promonocyte | 2.17e-08 | 59 |
macrophage dendritic cell progenitor | 4.02e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.45e-21 | 1 |
midbrain nucleus | 3.45e-21 | 1 |
regional part of midbrain | 3.45e-21 | 1 |
midbrain | 3.45e-21 | 1 |
presumptive midbrain | 3.45e-21 | 1 |
midbrain neural tube | 3.45e-21 | 1 |
corpus callosum | 7.72e-21 | 1 |
central nervous system cell part cluster | 7.72e-21 | 1 |
axon tract | 7.72e-21 | 1 |
intercerebral commissure | 7.72e-21 | 1 |
dorsal telencephalic commissure | 7.72e-21 | 1 |
brain white matter | 7.72e-21 | 1 |
brain commissure | 7.72e-21 | 1 |
white matter | 7.72e-21 | 1 |
nervous system commissure | 7.72e-21 | 1 |
cerebral hemisphere white matter | 7.72e-21 | 1 |
dorsal plus ventral thalamus | 2.47e-11 | 2 |
thalamic complex | 2.47e-11 | 2 |
multi cell component structure | 4.09e-11 | 2 |
neuron projection bundle | 4.09e-11 | 2 |
bone marrow | 3.22e-09 | 76 |
bone element | 1.53e-08 | 82 |
skeletal element | 8.88e-08 | 90 |
immune system | 1.59e-07 | 93 |
hematopoietic system | 3.90e-07 | 98 |
blood island | 3.90e-07 | 98 |
skeletal system | 5.44e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.