FFCP PHASE1:Hg19::chr19:51504411..51504451,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11202|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6369|TSSclassifier=S|UniProt=O60259|association_with_transcript=0bp_to_AF055982,CU691932,HQ448625_5end|description=CAGE_peak_2_at_KLK8_5end|id=chr19:51504411..51504451,-|ontology_enrichment_celltype=CL:0002076!3.32e-18!43;CL:0000066!1.17e-16!254;CL:0000223!1.06e-14!59;CL:0002159!1.39e-11!13;CL:0000039!6.24e-11!7;CL:0000586!6.24e-11!7;CL:0002077!6.93e-09!33;CL:0002251!1.35e-08!21;CL:0002322!6.07e-08!5;CL:0002368!4.99e-07!13|ontology_enrichment_celltype_v019=CL:0002159;7.51e-18;14!CL:0000039;2.15e-17;7!CL:0000586;2.15e-17;7!CL:0002077;9.02e-14;34!CL:0002322;2.12e-12;5!CL:0002076;7.95e-12;42!CL:0002251;1.45e-11;20!CL:0002166;1.55e-08;3!CL:0002621;1.64e-08;3!CL:0000362;1.64e-07;9!CL:0000240;2.32e-07;6!CL:0000311;2.32e-07;6!CL:0000079;2.32e-07;6!CL:0000237;2.32e-07;6!CL:0000575;6.58e-07;2!CL:0002327;6.62e-07;4|ontology_enrichment_celltype_v019_2=CL:0000066,4.85e-19,253;CL:0002159,7.94e-18,14;CL:0000039,2.07e-17,7;CL:0000586,2.07e-17,7;CL:0002077,4.35e-16,34;CL:0002076,1.01e-13,42;CL:0002322,2.32e-12,5;CL:0002251,1.41e-11,20;CL:0000223,1.73e-11,58;CL:0002166,1.57e-08,3;CL:0002621,1.70e-08,3;CL:0000076,1.64e-07,63;CL:0000362,1.69e-07,9;CL:0000240,2.40e-07,6;CL:0000311,2.40e-07,6;CL:0000079,2.40e-07,6;CL:0000237,2.40e-07,6;CL:0000036,2.40e-07,6;CL:0000357,2.40e-07,6;CL:0000114,2.40e-07,6;CL:0002327,6.50e-07,4;CL:0000575,6.68e-07,2|ontology_enrichment_development_v019=UBERON:0009117;1.85e-08;10!UBERON:0005564;1.85e-08;10!CL:0000357;2.32e-07;6!CL:0000114;2.32e-07;6!CL:0000223;3.33e-07;58!UBERON:0008814;8.70e-07;2!UBERON:0010056;8.70e-07;2|ontology_enrichment_disease=DOID:1749!1.90e-14!14;DOID:305!9.41e-09!106;DOID:0050687!3.83e-07!143|ontology_enrichment_disease_v019=DOID:1749;3.16e-12;14|ontology_enrichment_disease_v019_2=DOID:1749,3.05e-12,14;DOID:305,2.25e-09,106;DOID:0050687,1.59e-07,143|ontology_enrichment_uberon=UBERON:0003729!5.35e-09!5;UBERON:0000464!1.24e-08!104;UBERON:0005156!2.77e-08!59;UBERON:0000990!2.77e-08!59;UBERON:0003343!8.12e-08!4;UBERON:0004785!8.12e-08!4;UBERON:0003101!1.03e-07!22;UBERON:0000079!1.03e-07!22;UBERON:0001004!1.19e-07!72;UBERON:0000161!2.15e-07!35;UBERON:0000166!2.69e-07!21;UBERON:0003135!5.02e-07!11;UBERON:0000974!5.76e-07!10;UBERON:0003133!7.71e-07!48|ontology_enrichment_uberon_v019=UBERON:0003729;2.80e-12;13!UBERON:0003343;3.99e-12;4!UBERON:0004785;3.99e-12;4!UBERON:0000974;1.07e-11;6!UBERON:0000344;1.99e-11;20!UBERON:0000165;2.64e-09;28!UBERON:0001723;5.11e-09;3!UBERON:0001033;5.11e-09;3!UBERON:0001949;1.64e-08;3!UBERON:0000161;6.30e-08;19!UBERON:0000166;6.30e-08;19!UBERON:0001911;6.62e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003729,2.80e-12,13;UBERON:0003343,3.78e-12,4;UBERON:0004785,3.78e-12,4;UBERON:0000344,2.18e-11,20;UBERON:0000166,2.18e-10,22;UBERON:0003102,2.35e-10,99;UBERON:0001723,5.05e-09,3;UBERON:0001033,5.05e-09,3;UBERON:0010056,5.05e-09,3;UBERON:0000165,7.05e-09,29;UBERON:0000930,7.05e-09,29;UBERON:0001949,1.70e-08,3;UBERON:0000033,2.31e-08,56;UBERON:0000153,3.28e-08,62;UBERON:0007811,3.28e-08,62;UBERON:0000161,3.92e-08,36;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0000974,7.82e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,25.500670180478,24.4717732237723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60456474173561,4.36393792945335,6.02289650316908,5.00092195131341,2.12047629314376,4.4153698290417,3.62813692553797,2.52320850875628,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2920319657661,10.1161577931858,13.4708823031585,2.4998880192803,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,9.3733833986777,4.19955320497149,4.82035330624114,6.53777215730793,8.13775027839093,48.3062175748166,0,0,0,0.432359860250884,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80709058424599,16.2983350416537,0,0,0.262248829918848,4.51199612907412,1.5403067420883,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,1.78413391131527,0.831076008928724,0,0,0,0,0,0,0,0,0,5.16838984196555,22.7521086112782,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.8353889414582,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11202 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6369 | |||
|TSSclassifier=S | |||
|UniProt=O60259 | |||
|association_with_transcript=0bp_to_AF055982,CU691932,HQ448625_5end | |||
|description=CAGE_peak_2_at_KLK8_5end | |||
|id=chr19:51504411..51504451,- | |||
|ontology_enrichment_celltype=CL:0002076!3.32e-18!43;CL:0000066!1.17e-16!254;CL:0000223!1.06e-14!59;CL:0002159!1.39e-11!13;CL:0000039!6.24e-11!7;CL:0000586!6.24e-11!7;CL:0002077!6.93e-09!33;CL:0002251!1.35e-08!21;CL:0002322!6.07e-08!5;CL:0002368!4.99e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;7.51e-18;14!CL:0000039;2.15e-17;7!CL:0000586;2.15e-17;7!CL:0002077;9.02e-14;34!CL:0002322;2.12e-12;5!CL:0002076;7.95e-12;42!CL:0002251;1.45e-11;20!CL:0002166;1.55e-08;3!CL:0002621;1.64e-08;3!CL:0000362;1.64e-07;9!CL:0000240;2.32e-07;6!CL:0000311;2.32e-07;6!CL:0000079;2.32e-07;6!CL:0000237;2.32e-07;6!CL:0000575;6.58e-07;2!CL:0002327;6.62e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.85e-19,253;CL:0002159,7.94e-18,14;CL:0000039,2.07e-17,7;CL:0000586,2.07e-17,7;CL:0002077,4.35e-16,34;CL:0002076,1.01e-13,42;CL:0002322,2.32e-12,5;CL:0002251,1.41e-11,20;CL:0000223,1.73e-11,58;CL:0002166,1.57e-08,3;CL:0002621,1.70e-08,3;CL:0000076,1.64e-07,63;CL:0000362,1.69e-07,9;CL:0000240,2.40e-07,6;CL:0000311,2.40e-07,6;CL:0000079,2.40e-07,6;CL:0000237,2.40e-07,6;CL:0000036,2.40e-07,6;CL:0000357,2.40e-07,6;CL:0000114,2.40e-07,6;CL:0002327,6.50e-07,4;CL:0000575,6.68e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.85e-08;10!UBERON:0005564;1.85e-08;10!CL:0000357;2.32e-07;6!CL:0000114;2.32e-07;6!CL:0000223;3.33e-07;58!UBERON:0008814;8.70e-07;2!UBERON:0010056;8.70e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!1.90e-14!14;DOID:305!9.41e-09!106;DOID:0050687!3.83e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.16e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.05e-12,14;DOID:305,2.25e-09,106;DOID:0050687,1.59e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003729!5.35e-09!5;UBERON:0000464!1.24e-08!104;UBERON:0005156!2.77e-08!59;UBERON:0000990!2.77e-08!59;UBERON:0003343!8.12e-08!4;UBERON:0004785!8.12e-08!4;UBERON:0003101!1.03e-07!22;UBERON:0000079!1.03e-07!22;UBERON:0001004!1.19e-07!72;UBERON:0000161!2.15e-07!35;UBERON:0000166!2.69e-07!21;UBERON:0003135!5.02e-07!11;UBERON:0000974!5.76e-07!10;UBERON:0003133!7.71e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;2.80e-12;13!UBERON:0003343;3.99e-12;4!UBERON:0004785;3.99e-12;4!UBERON:0000974;1.07e-11;6!UBERON:0000344;1.99e-11;20!UBERON:0000165;2.64e-09;28!UBERON:0001723;5.11e-09;3!UBERON:0001033;5.11e-09;3!UBERON:0001949;1.64e-08;3!UBERON:0000161;6.30e-08;19!UBERON:0000166;6.30e-08;19!UBERON:0001911;6.62e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,2.80e-12,13;UBERON:0003343,3.78e-12,4;UBERON:0004785,3.78e-12,4;UBERON:0000344,2.18e-11,20;UBERON:0000166,2.18e-10,22;UBERON:0003102,2.35e-10,99;UBERON:0001723,5.05e-09,3;UBERON:0001033,5.05e-09,3;UBERON:0010056,5.05e-09,3;UBERON:0000165,7.05e-09,29;UBERON:0000930,7.05e-09,29;UBERON:0001949,1.70e-08,3;UBERON:0000033,2.31e-08,56;UBERON:0000153,3.28e-08,62;UBERON:0007811,3.28e-08,62;UBERON:0000161,3.92e-08,36;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0000974,7.82e-07,10 | |||
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|short_description=p2@KLK8 | |||
}} |
Revision as of 22:02, 11 September 2013
Short description: | p2@KLK8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KLK8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF055982, CU691932, HQ448625_5end |
EntrezGene: | KLK8 |
HGNC: | 6369 |
UniProt: | O60259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.85e-19 | 253 |
general ecto-epithelial cell | 7.94e-18 | 14 |
germ line cell | 2.07e-17 | 7 |
germ cell | 2.07e-17 | 7 |
ecto-epithelial cell | 4.35e-16 | 34 |
endo-epithelial cell | 1.01e-13 | 42 |
embryonic stem cell | 2.32e-12 | 5 |
epithelial cell of alimentary canal | 1.41e-11 | 20 |
endodermal cell | 1.73e-11 | 58 |
epithelial cell of Malassez | 1.57e-08 | 3 |
gingival epithelial cell | 1.70e-08 | 3 |
squamous epithelial cell | 1.64e-07 | 63 |
epidermal cell | 1.69e-07 | 9 |
stratified squamous epithelial cell | 2.40e-07 | 6 |
keratin accumulating cell | 2.40e-07 | 6 |
stratified epithelial cell | 2.40e-07 | 6 |
keratinizing barrier epithelial cell | 2.40e-07 | 6 |
epithelial fate stem cell | 2.40e-07 | 6 |
stratified epithelial stem cell | 2.40e-07 | 6 |
surface ectodermal cell | 2.40e-07 | 6 |
mammary gland epithelial cell | 6.50e-07 | 4 |
corneal epithelial cell | 6.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 2.80e-12 | 13 |
mucosa of oral region | 3.78e-12 | 4 |
respiratory system mucosa | 3.78e-12 | 4 |
mucosa | 2.18e-11 | 20 |
oral opening | 2.18e-10 | 22 |
surface structure | 2.35e-10 | 99 |
tongue | 5.05e-09 | 3 |
gustatory system | 5.05e-09 | 3 |
future tongue | 5.05e-09 | 3 |
mouth | 7.05e-09 | 29 |
stomodeum | 7.05e-09 | 29 |
gingival epithelium | 1.70e-08 | 3 |
head | 2.31e-08 | 56 |
anterior region of body | 3.28e-08 | 62 |
craniocervical region | 3.28e-08 | 62 |
orifice | 3.92e-08 | 36 |
mammary gland | 6.50e-07 | 4 |
mammary bud | 6.50e-07 | 4 |
mammary ridge | 6.50e-07 | 4 |
mammary placode | 6.50e-07 | 4 |
neck | 7.82e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.05e-12 | 14 |
carcinoma | 2.25e-09 | 106 |
cell type cancer | 1.59e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.