FFCP PHASE1:Hg19::chr1:114447784..114447805,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64858|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17641|TSSclassifier=S|UniProt=Q9H816|association_with_transcript=21bp_to_ENST00000369563_5end|description=CAGE_peak_3_at_DCLRE1B_5end|id=chr1:114447784..114447805,+|ontology_enrichment_celltype=CL:0000839!1.54e-22!70;CL:0000557!1.17e-20!71;CL:0002194!1.81e-20!63;CL:0000576!1.81e-20!63;CL:0000040!1.81e-20!63;CL:0000559!1.81e-20!63;CL:0002009!2.14e-20!65;CL:0002057!1.10e-19!42;CL:0000860!1.92e-19!45;CL:0000766!5.73e-18!76;CL:0000763!3.29e-17!112;CL:0000049!3.29e-17!112;CL:0002031!2.69e-16!124;CL:0002087!5.48e-15!119;CL:0002032!1.65e-14!165;CL:0000837!1.65e-14!165;CL:0000037!7.82e-14!172;CL:0000566!7.82e-14!172;CL:0000738!1.53e-13!140;CL:0000988!1.13e-12!182|ontology_enrichment_celltype_v019=CL:0000860;1.45e-35;33!CL:0002057;1.45e-35;33!CL:0000473;1.64e-28;39!CL:0000234;1.64e-28;39!CL:0000576;1.31e-16;48!CL:0000766;4.43e-12;69|ontology_enrichment_celltype_v019_2=CL:0000839,5.23e-30,66;CL:0000557,1.24e-29,67;CL:0000860,1.18e-28,42;CL:0002057,1.18e-28,42;CL:0000473,2.11e-27,48;CL:0000234,2.11e-27,48;CL:0002009,2.44e-27,61;CL:0002194,9.97e-26,59;CL:0000576,9.97e-26,59;CL:0000040,9.97e-26,59;CL:0000559,9.97e-26,59;CL:0000766,9.68e-25,72;CL:0002031,1.06e-19,120;CL:0000763,1.19e-17,108;CL:0000049,1.19e-17,108;CL:0000738,3.05e-15,136;CL:0002087,1.76e-14,115;CL:0002032,6.02e-13,161;CL:0000837,6.02e-13,161;CL:0000037,3.98e-12,168;CL:0000988,3.60e-11,177|ontology_enrichment_development_v019=CL:0002057;3.72e-20;42!CL:0000049;1.77e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.13e-20!102;UBERON:0003061!6.13e-20!102;UBERON:0002193!8.97e-20!112;UBERON:0001474!3.72e-17!86;UBERON:0002371!8.87e-17!80;UBERON:0002405!1.33e-14!115;UBERON:0004765!1.18e-13!101;UBERON:0001434!1.18e-13!101|ontology_enrichment_uberon_v019=UBERON:0002346;1.26e-09;4!UBERON:0000923;1.26e-09;4!UBERON:0010316;1.26e-09;4!UBERON:0005291;1.26e-09;4!UBERON:0002050;8.90e-08;5!UBERON:0005423;8.90e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.99e-25,76;UBERON:0002390,5.35e-24,98;UBERON:0003061,5.35e-24,98;UBERON:0002405,1.67e-23,93;UBERON:0001474,3.91e-23,82;UBERON:0002193,3.71e-21,108;UBERON:0004765,1.50e-20,90;UBERON:0001434,6.71e-18,100;UBERON:0003081,7.18e-10,203;UBERON:0002204,2.14e-08,167|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0.229240217243854,0.410502947249729,0.314843125254717,0,0,0.309632246632152,0,0,0,0.619737604642413,0.284338464974843,0,0,0,0.217010870715852,0.895661896959697,0.647787332037959,0.257575567634187,0.726991193897824,1.51150377475524,1.4555043671269,0.697287110717054,1.6446715520873,3.40677007984614,0.28769239232215,1.2808035326455,0.945928919554341,2.06847408441971,1.93645405075148,2.70852973188684,0.941211697713023,1.09162460023138,1.12361742222542,2.14258724659632,2.56743221660875,0.639337125799041,0.659702600373432,0.797854630486527,2.55734850319616,1.45104619314292,0.56738522469114,1.86846674698672,1.7587406567972,1.5644487552606,1.52032191293582,3.63239701580021,0.736555271975129,0.632924774881769,0.211255286311942,0.425208599930087,0.419317291016752,0.673971786878971,0.300353785683013,0.964353520182481,0.285012743741249,0.39783335439818,0.182664153764634,1.75996244461323,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0.296573126324121,0,1.04535523804977,0.339928028092699,0,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0,0.175669571386252,0.392937226493138,0,0.370784442784429,1.62273696827342,1.39303789839414,0.398873881556595,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0.732186172644509,0.735326160691737,0,0,0.44905874525234,0.563057402416611,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0.622422070799533,0,0,0.302714855289863,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0,0,0,0.337169380156203,0.964044119533928,0.110293972732394,0.653638332277218,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.185176890317059,0,0,0,0.115930404975077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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64858 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17641 | |||
|TSSclassifier=S | |||
|UniProt=Q9H816 | |||
|association_with_transcript=21bp_to_ENST00000369563_5end | |||
|description=CAGE_peak_3_at_DCLRE1B_5end | |||
|id=chr1:114447784..114447805,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.54e-22!70;CL:0000557!1.17e-20!71;CL:0002194!1.81e-20!63;CL:0000576!1.81e-20!63;CL:0000040!1.81e-20!63;CL:0000559!1.81e-20!63;CL:0002009!2.14e-20!65;CL:0002057!1.10e-19!42;CL:0000860!1.92e-19!45;CL:0000766!5.73e-18!76;CL:0000763!3.29e-17!112;CL:0000049!3.29e-17!112;CL:0002031!2.69e-16!124;CL:0002087!5.48e-15!119;CL:0002032!1.65e-14!165;CL:0000837!1.65e-14!165;CL:0000037!7.82e-14!172;CL:0000566!7.82e-14!172;CL:0000738!1.53e-13!140;CL:0000988!1.13e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-35;33!CL:0002057;1.45e-35;33!CL:0000473;1.64e-28;39!CL:0000234;1.64e-28;39!CL:0000576;1.31e-16;48!CL:0000766;4.43e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.23e-30,66;CL:0000557,1.24e-29,67;CL:0000860,1.18e-28,42;CL:0002057,1.18e-28,42;CL:0000473,2.11e-27,48;CL:0000234,2.11e-27,48;CL:0002009,2.44e-27,61;CL:0002194,9.97e-26,59;CL:0000576,9.97e-26,59;CL:0000040,9.97e-26,59;CL:0000559,9.97e-26,59;CL:0000766,9.68e-25,72;CL:0002031,1.06e-19,120;CL:0000763,1.19e-17,108;CL:0000049,1.19e-17,108;CL:0000738,3.05e-15,136;CL:0002087,1.76e-14,115;CL:0002032,6.02e-13,161;CL:0000837,6.02e-13,161;CL:0000037,3.98e-12,168;CL:0000988,3.60e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-20;42!CL:0000049;1.77e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.13e-20!102;UBERON:0003061!6.13e-20!102;UBERON:0002193!8.97e-20!112;UBERON:0001474!3.72e-17!86;UBERON:0002371!8.87e-17!80;UBERON:0002405!1.33e-14!115;UBERON:0004765!1.18e-13!101;UBERON:0001434!1.18e-13!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.26e-09;4!UBERON:0000923;1.26e-09;4!UBERON:0010316;1.26e-09;4!UBERON:0005291;1.26e-09;4!UBERON:0002050;8.90e-08;5!UBERON:0005423;8.90e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.99e-25,76;UBERON:0002390,5.35e-24,98;UBERON:0003061,5.35e-24,98;UBERON:0002405,1.67e-23,93;UBERON:0001474,3.91e-23,82;UBERON:0002193,3.71e-21,108;UBERON:0004765,1.50e-20,90;UBERON:0001434,6.71e-18,100;UBERON:0003081,7.18e-10,203;UBERON:0002204,2.14e-08,167 | |||
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| |||
|short_description=p3@DCLRE1B | |||
}} |
Revision as of 23:37, 11 September 2013
Short description: | p3@DCLRE1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DCLRE1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000369563_5end |
EntrezGene: | DCLRE1B |
HGNC: | 17641 |
UniProt: | Q9H816 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 5.23e-30 | 66 |
granulocyte monocyte progenitor cell | 1.24e-29 | 67 |
classical monocyte | 1.18e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-28 | 42 |
defensive cell | 2.11e-27 | 48 |
phagocyte | 2.11e-27 | 48 |
macrophage dendritic cell progenitor | 2.44e-27 | 61 |
monopoietic cell | 9.97e-26 | 59 |
monocyte | 9.97e-26 | 59 |
monoblast | 9.97e-26 | 59 |
promonocyte | 9.97e-26 | 59 |
myeloid leukocyte | 9.68e-25 | 72 |
hematopoietic lineage restricted progenitor cell | 1.06e-19 | 120 |
myeloid cell | 1.19e-17 | 108 |
common myeloid progenitor | 1.19e-17 | 108 |
leukocyte | 3.05e-15 | 136 |
nongranular leukocyte | 1.76e-14 | 115 |
hematopoietic oligopotent progenitor cell | 6.02e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.02e-13 | 161 |
hematopoietic stem cell | 3.98e-12 | 168 |
hematopoietic cell | 3.60e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.99e-25 | 76 |
hematopoietic system | 5.35e-24 | 98 |
blood island | 5.35e-24 | 98 |
immune system | 1.67e-23 | 93 |
bone element | 3.91e-23 | 82 |
hemolymphoid system | 3.71e-21 | 108 |
skeletal element | 1.50e-20 | 90 |
skeletal system | 6.71e-18 | 100 |
lateral plate mesoderm | 7.18e-10 | 203 |
musculoskeletal system | 2.14e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.