FFCP PHASE1:Hg19::chr1:200008734..200008765,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2494|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=7984|TSSclassifier=S|UniProt=|association_with_transcript=76bp_to_uc009wzh.2_5end|description=CAGE_peak_2_at_NR5A2_5end|id=chr1:200008734..200008765,+|ontology_enrichment_celltype=CL:0002139!1.74e-15!24;CL:0000115!2.26e-14!35;CL:0002078!8.61e-13!44;CL:0000071!7.97e-11!18;CL:0002546!7.97e-11!18;CL:0000213!6.69e-09!57;CL:0000215!6.69e-09!57;CL:1000413!5.11e-07!9|ontology_enrichment_celltype_v019=CL:0002139;3.28e-18;24!CL:0000115;1.15e-16;36!CL:0000071;8.16e-14;18!CL:0002078;3.18e-13;45!CL:0000213;4.55e-08;58!CL:0000215;4.55e-08;58!CL:1000413;1.06e-07;9!CL:0002618;5.77e-07;3!CL:0002188;8.37e-07;5|ontology_enrichment_celltype_v019_2=CL:0000115,7.29e-20,36;CL:0002139,3.02e-18,24;CL:0002078,3.91e-18,45;CL:0000071,7.48e-14,18;CL:0002546,7.48e-14,18;CL:0000213,1.98e-12,58;CL:0000215,1.98e-12,58;CL:1000413,7.85e-08,9;CL:0002188,7.37e-07,5;CL:0002618,8.98e-07,3|ontology_enrichment_development_v019=CL:0002546;8.16e-14;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!4.40e-11!155;UBERON:0001555!4.40e-11!155;UBERON:0007026!4.40e-11!155;UBERON:0001986!7.97e-11!18;UBERON:0004638!7.97e-11!18;UBERON:0004852!7.97e-11!18;UBERON:0000487!2.69e-10!22;UBERON:0006914!1.03e-09!25;UBERON:0000477!1.37e-09!286;UBERON:0000467!1.39e-09!625;UBERON:0000480!1.75e-09!626;UBERON:0000468!1.82e-09!659;UBERON:0004119!1.87e-09!169;UBERON:0000925!1.87e-09!169;UBERON:0006595!1.87e-09!169;UBERON:0004921!3.79e-09!129;UBERON:0004185!3.79e-09!129;UBERON:0004111!1.08e-08!241;UBERON:0007023!4.01e-08!115;UBERON:0000062!7.05e-08!511;UBERON:0003914!1.15e-07!118;UBERON:0000160!1.40e-07!27;UBERON:0003915!5.11e-07!9;UBERON:0004700!5.11e-07!9;UBERON:0001917!5.11e-07!9|ontology_enrichment_uberon_v019=UBERON:0004638;8.16e-14;18!UBERON:0001986;8.16e-14;18!UBERON:0004852;8.16e-14;18!UBERON:0006914;9.04e-11;25!UBERON:0000487;9.96e-11;22!UBERON:0000490;1.61e-08;33!UBERON:0003915;1.06e-07;9!UBERON:0004700;1.06e-07;9!UBERON:0001917;1.06e-07;9!UBERON:0003135;7.01e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.48e-14,18;UBERON:0001986,7.48e-14,18;UBERON:0004852,7.48e-14,18;UBERON:0006914,7.64e-11,25;UBERON:0000487,9.29e-11,22;UBERON:0003914,6.28e-10,117;UBERON:0000055,2.73e-09,68;UBERON:0004876,7.61e-08,11;UBERON:0003915,7.85e-08,9;UBERON:0004700,7.85e-08,9;UBERON:0001917,7.85e-08,9;UBERON:0002049,2.42e-07,78;UBERON:0007798,2.42e-07,78;UBERON:0000080,3.02e-07,9;UBERON:0002120,3.02e-07,9;UBERON:0004875,3.02e-07,9;UBERON:0005721,3.02e-07,9;UBERON:0005754,3.02e-07,9;UBERON:0007297,3.02e-07,9;UBERON:0007500,3.92e-07,59;UBERON:0001981,3.92e-07,59;UBERON:0004537,3.92e-07,59;UBERON:0006965,3.92e-07,59;UBERON:0007023,9.99e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,1.81619850790011,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,3.37896092523399,1.72046919021225,0,1.69592382577203,7.55098985177831,5.77747888074142,0.626984899610432,8.52775305258785,11.7402866686614,9.0374565446461,3.22263453687318,0.760272105718513,1.70843440283719,9.55924008899259,0.81014194788176,8.75137337183982,8.98117490504679,1.12611480483322,0,0,5.1296488300514,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,3.43269996538263,0,0,0.468642863667593,0.312160076830321,1.71141546463335,0.747243402759005,0,0,0,2.44985005505872,1.47401180774122,0.826606249406124,0,0.247266929278557,0,0,1.85169725349473,1.00094815897571,1.6623846929051,0,0,0,2.04177929688038,0.179389635688862,0.427114777637135,0.423863802319124,0.300091096084402,0,0,0,0,1.85130309806277,1.26216887122057,0.736399189138395,0,3.19508633264953,1.30977727695932,0.67824236924195,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,8.85786545549578,0,0,0,1.26755034821831,6.87979051674338,5.31710916013264,0,0.491953754172454,0.343135620597051,0,0,0,0,0.651616610620649,0,1.44331342025273,0,0,0.721832238805369,0.462985512576611,1.52203321787679,1.58040879591855,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,4.54933536283586,4.25234263191289,3.67057057373637,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0.274708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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7984 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=76bp_to_uc009wzh.2_5end | |||
|description=CAGE_peak_2_at_NR5A2_5end | |||
|id=chr1:200008734..200008765,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.74e-15!24;CL:0000115!2.26e-14!35;CL:0002078!8.61e-13!44;CL:0000071!7.97e-11!18;CL:0002546!7.97e-11!18;CL:0000213!6.69e-09!57;CL:0000215!6.69e-09!57;CL:1000413!5.11e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.28e-18;24!CL:0000115;1.15e-16;36!CL:0000071;8.16e-14;18!CL:0002078;3.18e-13;45!CL:0000213;4.55e-08;58!CL:0000215;4.55e-08;58!CL:1000413;1.06e-07;9!CL:0002618;5.77e-07;3!CL:0002188;8.37e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.29e-20,36;CL:0002139,3.02e-18,24;CL:0002078,3.91e-18,45;CL:0000071,7.48e-14,18;CL:0002546,7.48e-14,18;CL:0000213,1.98e-12,58;CL:0000215,1.98e-12,58;CL:1000413,7.85e-08,9;CL:0002188,7.37e-07,5;CL:0002618,8.98e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;8.16e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.40e-11!155;UBERON:0001555!4.40e-11!155;UBERON:0007026!4.40e-11!155;UBERON:0001986!7.97e-11!18;UBERON:0004638!7.97e-11!18;UBERON:0004852!7.97e-11!18;UBERON:0000487!2.69e-10!22;UBERON:0006914!1.03e-09!25;UBERON:0000477!1.37e-09!286;UBERON:0000467!1.39e-09!625;UBERON:0000480!1.75e-09!626;UBERON:0000468!1.82e-09!659;UBERON:0004119!1.87e-09!169;UBERON:0000925!1.87e-09!169;UBERON:0006595!1.87e-09!169;UBERON:0004921!3.79e-09!129;UBERON:0004185!3.79e-09!129;UBERON:0004111!1.08e-08!241;UBERON:0007023!4.01e-08!115;UBERON:0000062!7.05e-08!511;UBERON:0003914!1.15e-07!118;UBERON:0000160!1.40e-07!27;UBERON:0003915!5.11e-07!9;UBERON:0004700!5.11e-07!9;UBERON:0001917!5.11e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.16e-14;18!UBERON:0001986;8.16e-14;18!UBERON:0004852;8.16e-14;18!UBERON:0006914;9.04e-11;25!UBERON:0000487;9.96e-11;22!UBERON:0000490;1.61e-08;33!UBERON:0003915;1.06e-07;9!UBERON:0004700;1.06e-07;9!UBERON:0001917;1.06e-07;9!UBERON:0003135;7.01e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.48e-14,18;UBERON:0001986,7.48e-14,18;UBERON:0004852,7.48e-14,18;UBERON:0006914,7.64e-11,25;UBERON:0000487,9.29e-11,22;UBERON:0003914,6.28e-10,117;UBERON:0000055,2.73e-09,68;UBERON:0004876,7.61e-08,11;UBERON:0003915,7.85e-08,9;UBERON:0004700,7.85e-08,9;UBERON:0001917,7.85e-08,9;UBERON:0002049,2.42e-07,78;UBERON:0007798,2.42e-07,78;UBERON:0000080,3.02e-07,9;UBERON:0002120,3.02e-07,9;UBERON:0004875,3.02e-07,9;UBERON:0005721,3.02e-07,9;UBERON:0005754,3.02e-07,9;UBERON:0007297,3.02e-07,9;UBERON:0007500,3.92e-07,59;UBERON:0001981,3.92e-07,59;UBERON:0004537,3.92e-07,59;UBERON:0006965,3.92e-07,59;UBERON:0007023,9.99e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,1.81619850790011,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,3.37896092523399,1.72046919021225,0,1.69592382577203,7.55098985177831,5.77747888074142,0.626984899610432,8.52775305258785,11.7402866686614,9.0374565446461,3.22263453687318,0.760272105718513,1.70843440283719,9.55924008899259,0.81014194788176,8.75137337183982,8.98117490504679,1.12611480483322,0,0,5.1296488300514,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,3.43269996538263,0,0,0.468642863667593,0.312160076830321,1.71141546463335,0.747243402759005,0,0,0,2.44985005505872,1.47401180774122,0.826606249406124,0,0.247266929278557,0,0,1.85169725349473,1.00094815897571,1.6623846929051,0,0,0,2.04177929688038,0.179389635688862,0.427114777637135,0.423863802319124,0.300091096084402,0,0,0,0,1.85130309806277,1.26216887122057,0.736399189138395,0,3.19508633264953,1.30977727695932,0.67824236924195,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,8.85786545549578,0,0,0,1.26755034821831,6.87979051674338,5.31710916013264,0,0.491953754172454,0.343135620597051,0,0,0,0,0.651616610620649,0,1.44331342025273,0,0,0.721832238805369,0.462985512576611,1.52203321787679,1.58040879591855,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,4.54933536283586,4.25234263191289,3.67057057373637,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0.27470839445503,1.40266149865,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0,1.27281299170375,0,0,0.823611089208164,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0,0,1.10273068709225,0,0,1.73632660280006,2.62357900818653,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0,0.306806047506464,0,0,0.988551862620595,0.537063524026827,0,2.26879832964947,0,0,0,0,0,1.30213880542617,0,5.79999660347835,0,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,2.30850775511391,0.113942055847001,0.23056390438806,0,0,0.31900115973192,0,0,0,0,0.332423363800313,0,0,0,0,0,0.210998064528027,0,0.706765357169704,0,0,2.21143911258348,2.4441205797345,0,0,0,0.067401132980677,2.40773294189637,0,0,1.9566461893209,0.485560759068186,1.18375320854817,3.62972148145992,0,1.0741718536843,0,0.103688191397247,0,0,0,0,0,0,0,0.489961987071888,0.261177619741208,1.7472666824203,0,0,0,0,1.26085721434945,0,0.451961481561065,0,0,0,0,0.0801588202515337,3.41524791582964,0,0.432271251462318,0.80175617316141,0,0,0,0,0,0,0,2.60055530911367,0,0,0,4.29765441419957,0,0.279282401272254,2.06244381610515,5.74298419661451,0.199679000498991,1.28767814440971,1.78537165953498,0.671834724867263,0,0,0,0,0.0674035438541849,3.24810688998671,0,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0.709251365692784,0.524545881349981,0.105600336519406,0,0.383830394638891,1.42939065274673,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0.113312091520126,2.4913879725274,2.65013777824443,0,0,0.513260513652988,0,1.70859860108311,2.82967749179399,0.828478110694391,2.48083010905975,0,0,0,1.63205341010842,1.7548292581589,0.306345576763462,0.983617892129413,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0.499921631848426,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,2.04035332961045,0.463044948647668,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,2.82140754952547,1.531227386766,0,0,0,0,0,0,0,0,0.588886311006154,0,0,0.115525666150338,0,1.3807198521202,0,0.902523940191087,0,7.81514011233093,0,0,0.295712172434091,0,0,0,0,0.546974809018219,0,2.97726707033577,0,0.255524855279191,0.535701835878287,0.336283722218824,0,0.455324382702595,0,0,0,0.339848664884159,0,0.590969204419841,0.111231401892069,1.33438257845874,0,0.280272163313789,1.82631744101899,0,0.47775168788705,0.0714765441766563,0,1.85986280589,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,2.8041122745922,0,1.64260490969995,0,1.94284397223656,0,0,0,0,0,0.301925687133347,5.17066859323229,2.40415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| |||
|short_description=p2@NR5A2 | |||
}} |
Revision as of 02:40, 12 September 2013
Short description: | p2@NR5A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NR5A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_uc009wzh.2_5end |
EntrezGene: | NR5A2 |
HGNC: | 7984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.29e-20 | 36 |
endothelial cell of vascular tree | 3.02e-18 | 24 |
meso-epithelial cell | 3.91e-18 | 45 |
blood vessel endothelial cell | 7.48e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.48e-14 | 18 |
lining cell | 1.98e-12 | 58 |
barrier cell | 1.98e-12 | 58 |
endothelial cell of artery | 7.85e-08 | 9 |
glomerular endothelial cell | 7.37e-07 | 5 |
endothelial cell of umbilical vein | 8.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 7.48e-14 | 18 |
endothelium | 7.48e-14 | 18 |
cardiovascular system endothelium | 7.48e-14 | 18 |
squamous epithelium | 7.64e-11 | 25 |
simple squamous epithelium | 9.29e-11 | 22 |
epithelial tube | 6.28e-10 | 117 |
vessel | 2.73e-09 | 68 |
urogenital ridge | 7.61e-08 | 11 |
endothelial tube | 7.85e-08 | 9 |
arterial system endothelium | 7.85e-08 | 9 |
endothelium of artery | 7.85e-08 | 9 |
vasculature | 2.42e-07 | 78 |
vascular system | 2.42e-07 | 78 |
mesonephros | 3.02e-07 | 9 |
pronephros | 3.02e-07 | 9 |
nephrogenic cord | 3.02e-07 | 9 |
pronephric mesoderm | 3.02e-07 | 9 |
rostral part of nephrogenic cord | 3.02e-07 | 9 |
presumptive pronephric mesoderm | 3.02e-07 | 9 |
epithelial tube open at both ends | 3.92e-07 | 59 |
blood vessel | 3.92e-07 | 59 |
blood vasculature | 3.92e-07 | 59 |
vascular cord | 3.92e-07 | 59 |
adult organism | 9.99e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.