FFCP PHASE1:Hg19::chr20:34195420..34195438,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=15801|TSSclassifier=S|UniProt=|association_with_transcript=-4bp_to_ENST00000431615_5end|coexpression_cluster_id=C34|description=CAGE_peak_1_at_FER1L4_5end|id=chr20:34195420..34195438,-|ontology_enrichment_celltype=CL:0000066!2.08e-08!254;CL:0002541!5.45e-08!3|ontology_enrichment_celltype_v019=CL:0002541;4.82e-08;3|ontology_enrichment_celltype_v019_2=CL:0002541,4.82e-08,3|ontology_enrichment_development_v019=UBERON:0009847;8.48e-08;3!UBERON:0003353;8.48e-08;3!UBERON:0006603;3.38e-07;65!UBERON:0003124;7.49e-07;1|ontology_enrichment_disease=DOID:305!1.28e-21!106;DOID:299!9.59e-21!25;DOID:0050687!2.89e-16!143;DOID:1749!4.70e-15!14;DOID:162!3.70e-09!235;DOID:14566!9.77e-09!239;DOID:7!4.71e-07!39|ontology_enrichment_disease_v019=DOID:299;2.82e-22;25!DOID:5093;9.33e-12;4!DOID:1612;9.33e-12;4!DOID:1749;6.29e-09;14!DOID:305;2.75e-08;106|ontology_enrichment_disease_v019_2=DOID:299,2.82e-22,25;DOID:305,5.25e-20,106;DOID:0050687,6.28e-15,143;DOID:5093,1.06e-11,4;DOID:1612,1.06e-11,4;DOID:1749,6.40e-09,14;DOID:162,5.22e-07,235;DOID:7,6.00e-07,39;DOID:14566,9.25e-07,239|ontology_enrichment_uberon=UBERON:0004119!1.77e-09!169;UBERON:0000925!1.77e-09!169;UBERON:0006595!1.77e-09!169;UBERON:0002294!1.97e-08!7;UBERON:0001173!1.97e-08!7;UBERON:0004912!1.97e-08!7;UBERON:0001008!5.14e-08!45;UBERON:0000476!5.45e-08!3;UBERON:0000920!5.45e-08!3;UBERON:0001007!1.94e-07!155;UBERON:0001555!1.94e-07!155;UBERON:0007026!1.94e-07!155;UBERON:0004175!2.63e-07!25;UBERON:0006554!5.13e-07!44;UBERON:0003975!7.89e-07!22|ontology_enrichment_uberon_v019=UBERON:0001255;1.09e-11;2!UBERON:0001556;1.09e-11;2!UBERON:0002294;1.36e-11;7!UBERON:0001173;1.36e-11;7!UBERON:0000058;1.79e-08;10!UBERON:0003124;4.82e-08;3!UBERON:0000920;4.82e-08;3!UBERON:0002110;1.83e-07;3!UBERON:0002114;1.83e-07;2!UBERON:0002075;7.63e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0001255,1.01e-11,2;UBERON:0001556,1.01e-11,2;UBERON:0000162,3.75e-09,14;UBERON:0001353,3.75e-09,14;UBERON:0000163,3.75e-09,14;UBERON:0006866,3.75e-09,14;UBERON:0000164,3.75e-09,14;UBERON:0000931,3.75e-09,14;UBERON:0002294,4.90e-09,9;UBERON:0001173,4.90e-09,9;UBERON:0004912,4.90e-09,9;UBERON:0004122,1.60e-08,15;UBERON:0003064,4.10e-08,28;UBERON:0000920,4.82e-08,3;UBERON:0002114,1.80e-07,2;UBERON:0003124,1.89e-07,7;UBERON:0002110,1.93e-07,3;UBERON:0006242,1.93e-07,3;UBERON:0001007,2.89e-07,145;UBERON:0001555,2.89e-07,145;UBERON:0007026,2.89e-07,145;UBERON:0004119,3.46e-07,160;UBERON:0000925,3.46e-07,160;UBERON:0006595,3.46e-07,160;UBERON:0002075,7.68e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,5.15091697256924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,5.87333766392017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46034044505319,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7428108081644,0,0,0,0,1.19372242368845,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,4.22381250392436,0.179021174675609,0,12.3304257046167,0,0,0,0,0,2.60427761085233,0,0,0.796554137998498,9.91589236141789,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,2.96200226552248,0,6.38002319463839,0.183195186803725,6.92945208824225,0,0,0,0,0,0,0,0,0,10.2836669140263,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,3.32629852184552,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.347119476670262,0.0979923974143777,5.22355239482415,5.06707337901887,0,0,0,0,0,0,0,0,0,0,0,2.16428814679141,3.41524791582964,0,1.00863292007874,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.83927341015997,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,7.75296524548339,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=15801 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000431615_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_FER1L4_5end | |||
|id=chr20:34195420..34195438,- | |||
|ontology_enrichment_celltype=CL:0000066!2.08e-08!254;CL:0002541!5.45e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.82e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.82e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;8.48e-08;3!UBERON:0003353;8.48e-08;3!UBERON:0006603;3.38e-07;65!UBERON:0003124;7.49e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.28e-21!106;DOID:299!9.59e-21!25;DOID:0050687!2.89e-16!143;DOID:1749!4.70e-15!14;DOID:162!3.70e-09!235;DOID:14566!9.77e-09!239;DOID:7!4.71e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;2.82e-22;25!DOID:5093;9.33e-12;4!DOID:1612;9.33e-12;4!DOID:1749;6.29e-09;14!DOID:305;2.75e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.82e-22,25;DOID:305,5.25e-20,106;DOID:0050687,6.28e-15,143;DOID:5093,1.06e-11,4;DOID:1612,1.06e-11,4;DOID:1749,6.40e-09,14;DOID:162,5.22e-07,235;DOID:7,6.00e-07,39;DOID:14566,9.25e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.77e-09!169;UBERON:0000925!1.77e-09!169;UBERON:0006595!1.77e-09!169;UBERON:0002294!1.97e-08!7;UBERON:0001173!1.97e-08!7;UBERON:0004912!1.97e-08!7;UBERON:0001008!5.14e-08!45;UBERON:0000476!5.45e-08!3;UBERON:0000920!5.45e-08!3;UBERON:0001007!1.94e-07!155;UBERON:0001555!1.94e-07!155;UBERON:0007026!1.94e-07!155;UBERON:0004175!2.63e-07!25;UBERON:0006554!5.13e-07!44;UBERON:0003975!7.89e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001255;1.09e-11;2!UBERON:0001556;1.09e-11;2!UBERON:0002294;1.36e-11;7!UBERON:0001173;1.36e-11;7!UBERON:0000058;1.79e-08;10!UBERON:0003124;4.82e-08;3!UBERON:0000920;4.82e-08;3!UBERON:0002110;1.83e-07;3!UBERON:0002114;1.83e-07;2!UBERON:0002075;7.63e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,1.01e-11,2;UBERON:0001556,1.01e-11,2;UBERON:0000162,3.75e-09,14;UBERON:0001353,3.75e-09,14;UBERON:0000163,3.75e-09,14;UBERON:0006866,3.75e-09,14;UBERON:0000164,3.75e-09,14;UBERON:0000931,3.75e-09,14;UBERON:0002294,4.90e-09,9;UBERON:0001173,4.90e-09,9;UBERON:0004912,4.90e-09,9;UBERON:0004122,1.60e-08,15;UBERON:0003064,4.10e-08,28;UBERON:0000920,4.82e-08,3;UBERON:0002114,1.80e-07,2;UBERON:0003124,1.89e-07,7;UBERON:0002110,1.93e-07,3;UBERON:0006242,1.93e-07,3;UBERON:0001007,2.89e-07,145;UBERON:0001555,2.89e-07,145;UBERON:0007026,2.89e-07,145;UBERON:0004119,3.46e-07,160;UBERON:0000925,3.46e-07,160;UBERON:0006595,3.46e-07,160;UBERON:0002075,7.68e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,5.15091697256924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,5.87333766392017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46034044505319,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7428108081644,0,0,0,0,1.19372242368845,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,4.22381250392436,0.179021174675609,0,12.3304257046167,0,0,0,0,0,2.60427761085233,0,0,0.796554137998498,9.91589236141789,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,2.96200226552248,0,6.38002319463839,0.183195186803725,6.92945208824225,0,0,0,0,0,0,0,0,0,10.2836669140263,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,3.32629852184552,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.347119476670262,0.0979923974143777,5.22355239482415,5.06707337901887,0,0,0,0,0,0,0,0,0,0,0,2.16428814679141,3.41524791582964,0,1.00863292007874,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.83927341015997,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,7.75296524548339,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23887471053385,0,0.550285795565037,3.46576998451015,0,0,0,0,0,0,0,0.163771917510097,4.87925084516249,0,0,0,0,0,0,1.98484471355718,0,1.78867398695433,0,0,0,0,17.3856645518772,0,0,0,0,0,5.7840328983876,4.16013392107724,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7492824225286,0.31020638566432,0,4.69792813550728,0,8.16850097381205,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,3.18692818280077,0,0,0,0,0,0,0,0,0,4.2347384605883,7.94389530222766,15.3370641531769,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0,0,0,0,0,0.645499848534087,0.332660356546013,5.61682553415724,0.213454691755431,0,0.628776414746108,0,0,0,5.3260541934841,0,0 | |||
|short_description=p1@FER1L4 | |||
}} |
Revision as of 08:13, 12 September 2013
Short description: | p1@FER1L4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FER1L4_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -4bp_to_ENST00000431615_5end |
EntrezGene: | NA |
HGNC: | 15801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.82e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 1.01e-11 | 2 |
lower urinary tract | 1.01e-11 | 2 |
cloaca | 3.75e-09 | 14 |
anal region | 3.75e-09 | 14 |
embryonic cloaca | 3.75e-09 | 14 |
terminal part of digestive tract | 3.75e-09 | 14 |
primitive urogenital sinus | 3.75e-09 | 14 |
proctodeum | 3.75e-09 | 14 |
biliary system | 4.90e-09 | 9 |
biliary tree | 4.90e-09 | 9 |
biliary bud | 4.90e-09 | 9 |
genitourinary system | 1.60e-08 | 15 |
intermediate mesoderm | 4.10e-08 | 28 |
egg chorion | 4.82e-08 | 3 |
duodenum | 1.80e-07 | 2 |
chorion | 1.89e-07 | 7 |
gallbladder | 1.93e-07 | 3 |
gall bladder primordium | 1.93e-07 | 3 |
digestive system | 2.89e-07 | 145 |
digestive tract | 2.89e-07 | 145 |
primitive gut | 2.89e-07 | 145 |
endoderm-derived structure | 3.46e-07 | 160 |
endoderm | 3.46e-07 | 160 |
presumptive endoderm | 3.46e-07 | 160 |
viscus | 7.68e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.82e-22 | 25 |
carcinoma | 5.25e-20 | 106 |
cell type cancer | 6.28e-15 | 143 |
thoracic cancer | 1.06e-11 | 4 |
breast cancer | 1.06e-11 | 4 |
squamous cell carcinoma | 6.40e-09 | 14 |
cancer | 5.22e-07 | 235 |
disease of anatomical entity | 6.00e-07 | 39 |
disease of cellular proliferation | 9.25e-07 | 239 |
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