FFCP PHASE1:Hg19::chr22:45705961..45705970,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55007|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1313|TSSclassifier=S|UniProt=B0QY29|association_with_transcript=-34bp_to_ENST00000405673_5end|description=CAGE_peak_8_at_FAM118A_5end|id=chr22:45705961..45705970,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000453;3.42e-20;5!CL:0000451;4.96e-16;10!CL:0002581;9.60e-12;1!CL:0002591;9.60e-12;1!CL:0000895;9.60e-12;1!CL:0000990;1.76e-11;8!CL:0000624;7.32e-08;6|ontology_enrichment_celltype_v019_2=CL:0000453,3.43e-20,5;CL:0000451,4.78e-16,10;CL:0002581,6.97e-12,1;CL:0000810,1.47e-11,1;CL:0000895,1.47e-11,1;CL:0002436,1.47e-11,1;CL:0002427,1.47e-11,1;CL:0002428,1.47e-11,1;CL:0002429,1.47e-11,1;CL:0002433,1.47e-11,1;CL:0002431,1.47e-11,1;CL:0002432,1.47e-11,1;CL:0000990,1.77e-11,8;CL:0002591,1.81e-11,1;CL:0000624,7.85e-08,6|ontology_enrichment_development_v019=CL:0002427;9.60e-12;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001389;9.60e-12;1!UBERON:0000026;9.60e-12;1!UBERON:0008784;9.60e-12;1!UBERON:0006058;9.60e-12;1!UBERON:0003663;9.60e-12;1!UBERON:0004256;9.60e-12;1!UBERON:0004708;9.60e-12;1!UBERON:0002101;9.60e-12;1!UBERON:0004709;9.60e-12;1!UBERON:0002529;9.60e-12;1!UBERON:0010538;9.60e-12;1!UBERON:0003661;9.60e-12;1!UBERON:0010890;9.60e-12;1!UBERON:0002471;9.60e-12;1!UBERON:0001383;9.60e-12;1!UBERON:0010758;9.60e-12;1!UBERON:0010707;9.60e-12;1!UBERON:0000978;9.60e-12;1!UBERON:0002103;9.60e-12;1!UBERON:0001665;9.60e-12;1!UBERON:0003823;9.60e-12;1!UBERON:0000154;9.60e-12;1!UBERON:0010709;9.60e-12;1|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.62e-12,1;UBERON:0001389,5.62e-12,1;UBERON:0000026,5.62e-12,1;UBERON:0008784,5.62e-12,1;UBERON:0006058,5.62e-12,1;UBERON:0003663,5.62e-12,1;UBERON:0004256,5.62e-12,1;UBERON:0004708,5.62e-12,1;UBERON:0002101,5.62e-12,1;UBERON:0004709,5.62e-12,1;UBERON:0002529,5.62e-12,1;UBERON:0010538,5.62e-12,1;UBERON:0003661,5.62e-12,1;UBERON:0010890,5.62e-12,1;UBERON:0002471,5.62e-12,1;UBERON:0001383,5.62e-12,1;UBERON:0004357,5.62e-12,1;UBERON:0004347,5.62e-12,1;UBERON:0005420,5.62e-12,1;UBERON:0005732,5.62e-12,1;UBERON:0010758,5.62e-12,1;UBERON:0010707,5.62e-12,1;UBERON:0000978,5.62e-12,1;UBERON:0002103,5.62e-12,1;UBERON:0001665,5.62e-12,1;UBERON:0003823,5.62e-12,1;UBERON:0000154,5.62e-12,1;UBERON:0010709,5.62e-12,1;UBERON:0005733,5.62e-12,1;UBERON:0005730,5.62e-12,1;UBERON:0003351,1.03e-07,6|phase1_expression=0,0,0.140954404095971,0,1.34088328328186,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,1.14494394852423,0,0.251085279189606,0.382067028739756,0.656804715599566,0.314843125254717,0.393364276848904,0,0,0,0,0,0.542270404062111,0.142169232487422,0.587200878669695,0.553995408531877,0.601633342410425,0,0.223915474239924,0,0.257575567634187,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0.393010762749165,1.43921049299656,0.167186495390678,0.32592226663359,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,0,0,0.130059347559878,0,0,0,0.593146252648242,0.267540828089713,0,0.339928028092699,1.14966148080576,0,0.253019692019503,0.637130828648193,0,0.950452044448374,0,0.127986611154418,0,0,0,0.80642697289893,0.802320587350522,0.289648807765598,0,0,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0.364295288292542,0.370784442784429,0,0.174129737299267,0.132957960518865,0.953962497221368,2.85997455390064,0.371457501329565,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.775250277507987,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0,1.31780417436063,0,0,0,0.633152558322899,0.264818361626438,0,0,0,0,0.24666754841716,1.24484414159907,0,0.326923806226917,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0.23486899728753,0,0,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0.910161361938026,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0.635795703478686,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0.365921118388786,0,0.116193942869518,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0.100528972411631,0,0.651616610620649,0,0,0.34779121492523,0,0.144366447761074,0,0.761016608938393,0,0,0,0,0.445893486866185,0,0,0,0.179117045405697,0,0.383382679165211,0,0.08804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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1313 | |||
|TSSclassifier=S | |||
|UniProt=B0QY29 | |||
|association_with_transcript=-34bp_to_ENST00000405673_5end | |||
|description=CAGE_peak_8_at_FAM118A_5end | |||
|id=chr22:45705961..45705970,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;3.42e-20;5!CL:0000451;4.96e-16;10!CL:0002581;9.60e-12;1!CL:0002591;9.60e-12;1!CL:0000895;9.60e-12;1!CL:0000990;1.76e-11;8!CL:0000624;7.32e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.43e-20,5;CL:0000451,4.78e-16,10;CL:0002581,6.97e-12,1;CL:0000810,1.47e-11,1;CL:0000895,1.47e-11,1;CL:0002436,1.47e-11,1;CL:0002427,1.47e-11,1;CL:0002428,1.47e-11,1;CL:0002429,1.47e-11,1;CL:0002433,1.47e-11,1;CL:0002431,1.47e-11,1;CL:0002432,1.47e-11,1;CL:0000990,1.77e-11,8;CL:0002591,1.81e-11,1;CL:0000624,7.85e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002427;9.60e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;9.60e-12;1!UBERON:0000026;9.60e-12;1!UBERON:0008784;9.60e-12;1!UBERON:0006058;9.60e-12;1!UBERON:0003663;9.60e-12;1!UBERON:0004256;9.60e-12;1!UBERON:0004708;9.60e-12;1!UBERON:0002101;9.60e-12;1!UBERON:0004709;9.60e-12;1!UBERON:0002529;9.60e-12;1!UBERON:0010538;9.60e-12;1!UBERON:0003661;9.60e-12;1!UBERON:0010890;9.60e-12;1!UBERON:0002471;9.60e-12;1!UBERON:0001383;9.60e-12;1!UBERON:0010758;9.60e-12;1!UBERON:0010707;9.60e-12;1!UBERON:0000978;9.60e-12;1!UBERON:0002103;9.60e-12;1!UBERON:0001665;9.60e-12;1!UBERON:0003823;9.60e-12;1!UBERON:0000154;9.60e-12;1!UBERON:0010709;9.60e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.62e-12,1;UBERON:0001389,5.62e-12,1;UBERON:0000026,5.62e-12,1;UBERON:0008784,5.62e-12,1;UBERON:0006058,5.62e-12,1;UBERON:0003663,5.62e-12,1;UBERON:0004256,5.62e-12,1;UBERON:0004708,5.62e-12,1;UBERON:0002101,5.62e-12,1;UBERON:0004709,5.62e-12,1;UBERON:0002529,5.62e-12,1;UBERON:0010538,5.62e-12,1;UBERON:0003661,5.62e-12,1;UBERON:0010890,5.62e-12,1;UBERON:0002471,5.62e-12,1;UBERON:0001383,5.62e-12,1;UBERON:0004357,5.62e-12,1;UBERON:0004347,5.62e-12,1;UBERON:0005420,5.62e-12,1;UBERON:0005732,5.62e-12,1;UBERON:0010758,5.62e-12,1;UBERON:0010707,5.62e-12,1;UBERON:0000978,5.62e-12,1;UBERON:0002103,5.62e-12,1;UBERON:0001665,5.62e-12,1;UBERON:0003823,5.62e-12,1;UBERON:0000154,5.62e-12,1;UBERON:0010709,5.62e-12,1;UBERON:0005733,5.62e-12,1;UBERON:0005730,5.62e-12,1;UBERON:0003351,1.03e-07,6 | |||
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| |||
|short_description=p8@FAM118A | |||
}} |
Revision as of 12:21, 12 September 2013
Short description: | p8@FAM118A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_FAM118A_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENST00000405673_5end |
EntrezGene: | FAM118A |
HGNC: | 1313 |
UniProt: | B0QY29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.43e-20 | 5 |
dendritic cell | 4.78e-16 | 10 |
perirenal preadipocyte | 6.97e-12 | 1 |
CD4-positive, alpha-beta thymocyte | 1.47e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.47e-11 | 1 |
mature CD4 single-positive thymocyte | 1.47e-11 | 1 |
resting double-positive thymocyte | 1.47e-11 | 1 |
double-positive blast | 1.47e-11 | 1 |
CD69-positive double-positive thymocyte | 1.47e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.47e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.47e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.47e-11 | 1 |
conventional dendritic cell | 1.77e-11 | 8 |
smooth muscle cell of the pulmonary artery | 1.81e-11 | 1 |
CD4-positive, alpha-beta T cell | 7.85e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 5.62e-12 | 1 |
soleus muscle | 5.62e-12 | 1 |
appendage | 5.62e-12 | 1 |
lower limb segment | 5.62e-12 | 1 |
multi-limb segment region | 5.62e-12 | 1 |
hindlimb muscle | 5.62e-12 | 1 |
hindlimb zeugopod muscle | 5.62e-12 | 1 |
paired limb/fin | 5.62e-12 | 1 |
limb | 5.62e-12 | 1 |
pelvic appendage | 5.62e-12 | 1 |
limb segment | 5.62e-12 | 1 |
paired limb/fin segment | 5.62e-12 | 1 |
limb muscle | 5.62e-12 | 1 |
pelvic complex muscle | 5.62e-12 | 1 |
zeugopod | 5.62e-12 | 1 |
muscle of leg | 5.62e-12 | 1 |
paired limb/fin bud | 5.62e-12 | 1 |
limb bud | 5.62e-12 | 1 |
pelvic appendage bud | 5.62e-12 | 1 |
limb/fin field | 5.62e-12 | 1 |
subdivision of organism along appendicular axis | 5.62e-12 | 1 |
appendage girdle complex | 5.62e-12 | 1 |
leg | 5.62e-12 | 1 |
hindlimb | 5.62e-12 | 1 |
triceps surae | 5.62e-12 | 1 |
hindlimb zeugopod | 5.62e-12 | 1 |
posterior region of body | 5.62e-12 | 1 |
pelvic complex | 5.62e-12 | 1 |
limb field | 5.62e-12 | 1 |
hindlimb/pelvic fin field | 5.62e-12 | 1 |
pharyngeal epithelium | 1.03e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.