FFCP PHASE1:Hg19::chr2:113537239..113537251,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr2:113537239..113537251,-|id=chr2:113537239..113537251,-|ontology_enrichment_celltype=CL:0000860!5.34e-33!45;CL:0002057!7.46e-33!42;CL:0002009!1.44e-24!65;CL:0002194!2.52e-23!63;CL:0000576!2.52e-23!63;CL:0000040!2.52e-23!63;CL:0000559!2.52e-23!63;CL:0000557!5.99e-22!71;CL:0000839!2.23e-20!70;CL:0000766!4.67e-20!76;CL:0000763!9.25e-13!112;CL:0000049!9.25e-13!112;CL:0002087!1.41e-11!119;CL:0000738!8.54e-11!140;CL:0002621!4.08e-10!3;CL:0002031!6.99e-10!124;CL:0002251!8.26e-08!21;CL:0000037!1.48e-07!172;CL:0000566!1.48e-07!172;CL:0002076!1.50e-07!43;CL:0000063!6.49e-07!578;CL:0000988!8.58e-07!182|ontology_enrichment_celltype_v019=CL:0000860;1.29e-56;33!CL:0002057;1.29e-56;33!CL:0000473;6.07e-37;39!CL:0000234;6.07e-37;39!CL:0000576;7.22e-24;48!CL:0000766;1.69e-14;69!CL:0002087;2.32e-12;104!CL:0000763;5.00e-10;100!CL:0000317;2.12e-07;2!CL:1000448;2.12e-07;2!CL:0002308;2.12e-07;2!CL:0002140;2.12e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-48,42;CL:0002057,1.38e-48,42;CL:0000473,2.41e-42,48;CL:0000234,2.41e-42,48;CL:0002194,1.35e-33,59;CL:0000576,1.35e-33,59;CL:0000040,1.35e-33,59;CL:0000559,1.35e-33,59;CL:0002009,1.82e-32,61;CL:0000839,6.18e-30,66;CL:0000557,1.79e-29,67;CL:0000766,2.35e-27,72;CL:0000763,8.12e-18,108;CL:0000049,8.12e-18,108;CL:0002087,1.20e-16,115;CL:0002031,6.82e-16,120;CL:0000738,7.56e-14,136;CL:0002032,1.87e-11,161;CL:0000837,1.87e-11,161;CL:0000037,6.54e-11,168;CL:0000988,2.84e-10,177;CL:0000317,2.25e-07,2;CL:1000448,2.25e-07,2;CL:0002308,2.25e-07,2;CL:0002140,2.25e-07,2|ontology_enrichment_development_v019=CL:0002057;1.49e-32;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.33e-19!80;UBERON:0001474!5.31e-17!86;UBERON:0004765!2.38e-16!101;UBERON:0001434!2.38e-16!101;UBERON:0002390!5.52e-16!102;UBERON:0003061!5.52e-16!102;UBERON:0002193!6.02e-14!112;UBERON:0002405!3.94e-11!115;UBERON:0001949!4.08e-10!3;UBERON:0002204!9.89e-10!167;UBERON:0003081!1.98e-08!216|ontology_enrichment_uberon_v019=UBERON:0002419;2.12e-07;2!UBERON:0007771;2.12e-07;2!UBERON:0003297;2.12e-07;2!UBERON:0001821;2.12e-07;2!UBERON:0003487;2.12e-07;2!UBERON:0001820;2.12e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.40e-26,76;UBERON:0001474,7.02e-24,82;UBERON:0004765,1.20e-21,90;UBERON:0002405,6.58e-21,93;UBERON:0002390,8.96e-20,98;UBERON:0003061,8.96e-20,98;UBERON:0001434,2.37e-19,100;UBERON:0002193,8.12e-18,108;UBERON:0002204,5.50e-11,167;UBERON:0003081,9.61e-09,203;UBERON:0002419,2.25e-07,2;UBERON:0007771,2.25e-07,2;UBERON:0003297,2.25e-07,2;UBERON:0001821,2.25e-07,2;UBERON:0003487,2.25e-07,2;UBERON:0001820,2.25e-07,2;UBERON:0005089,2.25e-07,2;UBERON:0005088,2.25e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.619412741790207,3.16461631554365,0.768482119587302,1.89185783910868,3.10271112662957,1.93645405075148,0,0,0,0.224723484445085,8.57034898638527,2.56743221660875,7.03270838378945,0,0.199463657621632,0.426224750532694,10.447532590629,9.07816359505824,19.9303119678584,0.502497330513487,0,0.434377689410233,5.44859552370032,4.05105399586321,9.81033401066742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.708875486211932,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.60405176242628,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0.464845549297286,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0|short_description=p@chr2:113537239..113537251,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr2:113537239..113537251,- | |||
|id=chr2:113537239..113537251,- | |||
|ontology_enrichment_celltype=CL:0000860!5.34e-33!45;CL:0002057!7.46e-33!42;CL:0002009!1.44e-24!65;CL:0002194!2.52e-23!63;CL:0000576!2.52e-23!63;CL:0000040!2.52e-23!63;CL:0000559!2.52e-23!63;CL:0000557!5.99e-22!71;CL:0000839!2.23e-20!70;CL:0000766!4.67e-20!76;CL:0000763!9.25e-13!112;CL:0000049!9.25e-13!112;CL:0002087!1.41e-11!119;CL:0000738!8.54e-11!140;CL:0002621!4.08e-10!3;CL:0002031!6.99e-10!124;CL:0002251!8.26e-08!21;CL:0000037!1.48e-07!172;CL:0000566!1.48e-07!172;CL:0002076!1.50e-07!43;CL:0000063!6.49e-07!578;CL:0000988!8.58e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-56;33!CL:0002057;1.29e-56;33!CL:0000473;6.07e-37;39!CL:0000234;6.07e-37;39!CL:0000576;7.22e-24;48!CL:0000766;1.69e-14;69!CL:0002087;2.32e-12;104!CL:0000763;5.00e-10;100!CL:0000317;2.12e-07;2!CL:1000448;2.12e-07;2!CL:0002308;2.12e-07;2!CL:0002140;2.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-48,42;CL:0002057,1.38e-48,42;CL:0000473,2.41e-42,48;CL:0000234,2.41e-42,48;CL:0002194,1.35e-33,59;CL:0000576,1.35e-33,59;CL:0000040,1.35e-33,59;CL:0000559,1.35e-33,59;CL:0002009,1.82e-32,61;CL:0000839,6.18e-30,66;CL:0000557,1.79e-29,67;CL:0000766,2.35e-27,72;CL:0000763,8.12e-18,108;CL:0000049,8.12e-18,108;CL:0002087,1.20e-16,115;CL:0002031,6.82e-16,120;CL:0000738,7.56e-14,136;CL:0002032,1.87e-11,161;CL:0000837,1.87e-11,161;CL:0000037,6.54e-11,168;CL:0000988,2.84e-10,177;CL:0000317,2.25e-07,2;CL:1000448,2.25e-07,2;CL:0002308,2.25e-07,2;CL:0002140,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.33e-19!80;UBERON:0001474!5.31e-17!86;UBERON:0004765!2.38e-16!101;UBERON:0001434!2.38e-16!101;UBERON:0002390!5.52e-16!102;UBERON:0003061!5.52e-16!102;UBERON:0002193!6.02e-14!112;UBERON:0002405!3.94e-11!115;UBERON:0001949!4.08e-10!3;UBERON:0002204!9.89e-10!167;UBERON:0003081!1.98e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.12e-07;2!UBERON:0007771;2.12e-07;2!UBERON:0003297;2.12e-07;2!UBERON:0001821;2.12e-07;2!UBERON:0003487;2.12e-07;2!UBERON:0001820;2.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.40e-26,76;UBERON:0001474,7.02e-24,82;UBERON:0004765,1.20e-21,90;UBERON:0002405,6.58e-21,93;UBERON:0002390,8.96e-20,98;UBERON:0003061,8.96e-20,98;UBERON:0001434,2.37e-19,100;UBERON:0002193,8.12e-18,108;UBERON:0002204,5.50e-11,167;UBERON:0003081,9.61e-09,203;UBERON:0002419,2.25e-07,2;UBERON:0007771,2.25e-07,2;UBERON:0003297,2.25e-07,2;UBERON:0001821,2.25e-07,2;UBERON:0003487,2.25e-07,2;UBERON:0001820,2.25e-07,2;UBERON:0005089,2.25e-07,2;UBERON:0005088,2.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.619412741790207,3.16461631554365,0.768482119587302,1.89185783910868,3.10271112662957,1.93645405075148,0,0,0,0.224723484445085,8.57034898638527,2.56743221660875,7.03270838378945,0,0.199463657621632,0.426224750532694,10.447532590629,9.07816359505824,19.9303119678584,0.502497330513487,0,0.434377689410233,5.44859552370032,4.05105399586321,9.81033401066742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.708875486211932,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.60405176242628,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0.464845549297286,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:113537239..113537251,- | |||
}} |
Revision as of 13:00, 12 September 2013
Short description: | p@chr2:113537239..113537251, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:113537239..113537251, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-48 | 42 |
defensive cell | 2.41e-42 | 48 |
phagocyte | 2.41e-42 | 48 |
monopoietic cell | 1.35e-33 | 59 |
monocyte | 1.35e-33 | 59 |
monoblast | 1.35e-33 | 59 |
promonocyte | 1.35e-33 | 59 |
macrophage dendritic cell progenitor | 1.82e-32 | 61 |
myeloid lineage restricted progenitor cell | 6.18e-30 | 66 |
granulocyte monocyte progenitor cell | 1.79e-29 | 67 |
myeloid leukocyte | 2.35e-27 | 72 |
myeloid cell | 8.12e-18 | 108 |
common myeloid progenitor | 8.12e-18 | 108 |
nongranular leukocyte | 1.20e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 6.82e-16 | 120 |
leukocyte | 7.56e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-11 | 161 |
hematopoietic stem cell | 6.54e-11 | 168 |
hematopoietic cell | 2.84e-10 | 177 |
sebum secreting cell | 2.25e-07 | 2 |
epithelial cell of sweat gland | 2.25e-07 | 2 |
epithelial cell of skin gland | 2.25e-07 | 2 |
acinar cell of sebaceous gland | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.40e-26 | 76 |
bone element | 7.02e-24 | 82 |
skeletal element | 1.20e-21 | 90 |
immune system | 6.58e-21 | 93 |
hematopoietic system | 8.96e-20 | 98 |
blood island | 8.96e-20 | 98 |
skeletal system | 2.37e-19 | 100 |
hemolymphoid system | 8.12e-18 | 108 |
musculoskeletal system | 5.50e-11 | 167 |
lateral plate mesoderm | 9.61e-09 | 203 |
skin gland | 2.25e-07 | 2 |
epidermis gland | 2.25e-07 | 2 |
gland of integumental system | 2.25e-07 | 2 |
sebaceous gland | 2.25e-07 | 2 |
skin sebaceous gland | 2.25e-07 | 2 |
sweat gland | 2.25e-07 | 2 |
sweat gland placode | 2.25e-07 | 2 |
sebaceous gland placode | 2.25e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.