FFCP PHASE1:Hg19::chr2:65090754..65090770,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000445865,uc002sdf.1_5end|coexpression_cluster_id=C1344|description=CAGE_peak_1_at_ENST00000445865_5end,CAGE_peak_1_at_uc002sdf.1_5end|id=chr2:65090754..65090770,-|ontology_enrichment_celltype=CL:0000037!1.06e-23!172;CL:0000566!1.06e-23!172;CL:0000236!4.97e-23!14;CL:0000945!1.52e-22!24;CL:0000826!1.52e-22!24;CL:0000988!1.07e-21!182;CL:0000738!1.58e-20!140;CL:0002032!5.89e-20!165;CL:0000837!5.89e-20!165;CL:0002087!9.00e-15!119;CL:0002031!6.06e-13!124;CL:0000451!1.49e-11!10;CL:0000840!2.45e-11!5;CL:0001029!2.45e-11!5;CL:0000763!4.44e-11!112;CL:0000049!4.44e-11!112;CL:0000784!1.73e-09!3;CL:0000542!3.20e-09!53;CL:0000051!3.20e-09!53;CL:0000838!2.75e-08!52;CL:0000990!2.11e-07!8;CL:0000766!5.29e-07!76;CL:0000557!6.04e-07!71;CL:0002009!6.57e-07!65;CL:0001014!7.43e-07!2;CL:0001016!7.43e-07!2|ontology_enrichment_celltype_v019=CL:0000236;6.67e-60;13!CL:0000945;2.13e-37;24!CL:0000784;8.47e-21;3!CL:0000451;3.86e-15;10!CL:0001014;1.77e-14;2!CL:0001016;1.77e-14;2!CL:0000542;6.40e-14;53!CL:0000840;1.15e-10;5!CL:0002032;1.54e-07;1!CL:0000557;1.54e-07;1!CL:0000990;2.95e-07;8|ontology_enrichment_celltype_v019_2=CL:0000236,1.41e-55,14;CL:0000945,2.06e-37,24;CL:0000826,2.06e-37,24;CL:0000784,8.47e-21,3;CL:0000738,4.97e-17,136;CL:0000037,4.48e-16,168;CL:0000838,4.85e-16,52;CL:0000542,1.08e-15,53;CL:0000051,1.08e-15,53;CL:0000451,4.10e-15,10;CL:0000988,4.95e-15,177;CL:0001014,2.02e-14,2;CL:0001016,2.02e-14,2;CL:0002031,2.40e-12,120;CL:0002032,3.34e-12,161;CL:0000837,3.34e-12,161;CL:0002087,2.74e-11,115;CL:0000840,1.19e-10,5;CL:0001029,1.19e-10,5;CL:0000990,3.02e-07,8|ontology_enrichment_development_v019=CL:0000051;6.40e-14;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.19e-15!102;UBERON:0003061!2.19e-15!102;UBERON:0002193!1.68e-14!112;UBERON:0000178!6.37e-13!15;UBERON:0000179!6.37e-13!15;UBERON:0000463!6.37e-13!15;UBERON:0002106!1.47e-07!3;UBERON:0004854!1.47e-07!3;UBERON:0009034!1.47e-07!3;UBERON:0002095!1.47e-07!3;UBERON:0004782!1.47e-07!3;UBERON:0003281!1.47e-07!3;UBERON:0009664!1.47e-07!3;UBERON:0002296!1.47e-07!3;UBERON:0005602!1.47e-07!3;UBERON:0001179!1.47e-07!3;UBERON:0006293!1.47e-07!3|ontology_enrichment_uberon_v019=UBERON:0000178;2.07e-14;15!UBERON:0000179;2.07e-14;15!UBERON:0000463;2.07e-14;15!UBERON:0002390;4.32e-09;32!UBERON:0002372;9.40e-08;1!UBERON:0001961;9.40e-08;1!UBERON:0001744;9.40e-08;1!UBERON:0001042;9.40e-08;1!UBERON:0001735;9.40e-08;1!UBERON:0002193;3.75e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.71e-14,15;UBERON:0000179,1.71e-14,15;UBERON:0000463,1.71e-14,15;UBERON:0002372,1.04e-07,1;UBERON:0001961,1.04e-07,1;UBERON:0001744,1.04e-07,1;UBERON:0001735,1.04e-07,1;UBERON:0002193,2.05e-07,108;UBERON:0002390,4.59e-07,98;UBERON:0003061,4.59e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,1.16200800870452,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,8.79981222306614,7.09980194640771,3.55803701545422,3.84057200309856,6.4063357925762,5.17277195959035,9.25462821898807,10.494591299889,6.26134266020393,2.93618594685469,3.82273228125229,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.797747763113191,6.91622810485492,5.14795419702115,8.54352253057999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,7.02012795417713,2.67536092119711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,1.19115887728894,0.822724546172388,1.94541993357815,1.62009431171434,1.58625035258854,0,0,0,0.185803175125719,0,0,0,0.399158742865633,0,0,0,0.842391534340376,2.9670508274315,0.156679895773023,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,3.14963448172101,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.515663103788617,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.248298857183432,0,0,0,0,0,2.02056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,2.01273793591026,0.320568492303233|short_description=p1@ENST00000445865,p1@uc002sdf.1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000445865,uc002sdf.1_5end | |||
|coexpression_cluster_id=C1344 | |||
|description=CAGE_peak_1_at_ENST00000445865_5end,CAGE_peak_1_at_uc002sdf.1_5end | |||
|id=chr2:65090754..65090770,- | |||
|ontology_enrichment_celltype=CL:0000037!1.06e-23!172;CL:0000566!1.06e-23!172;CL:0000236!4.97e-23!14;CL:0000945!1.52e-22!24;CL:0000826!1.52e-22!24;CL:0000988!1.07e-21!182;CL:0000738!1.58e-20!140;CL:0002032!5.89e-20!165;CL:0000837!5.89e-20!165;CL:0002087!9.00e-15!119;CL:0002031!6.06e-13!124;CL:0000451!1.49e-11!10;CL:0000840!2.45e-11!5;CL:0001029!2.45e-11!5;CL:0000763!4.44e-11!112;CL:0000049!4.44e-11!112;CL:0000784!1.73e-09!3;CL:0000542!3.20e-09!53;CL:0000051!3.20e-09!53;CL:0000838!2.75e-08!52;CL:0000990!2.11e-07!8;CL:0000766!5.29e-07!76;CL:0000557!6.04e-07!71;CL:0002009!6.57e-07!65;CL:0001014!7.43e-07!2;CL:0001016!7.43e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.67e-60;13!CL:0000945;2.13e-37;24!CL:0000784;8.47e-21;3!CL:0000451;3.86e-15;10!CL:0001014;1.77e-14;2!CL:0001016;1.77e-14;2!CL:0000542;6.40e-14;53!CL:0000840;1.15e-10;5!CL:0002032;1.54e-07;1!CL:0000557;1.54e-07;1!CL:0000990;2.95e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.41e-55,14;CL:0000945,2.06e-37,24;CL:0000826,2.06e-37,24;CL:0000784,8.47e-21,3;CL:0000738,4.97e-17,136;CL:0000037,4.48e-16,168;CL:0000838,4.85e-16,52;CL:0000542,1.08e-15,53;CL:0000051,1.08e-15,53;CL:0000451,4.10e-15,10;CL:0000988,4.95e-15,177;CL:0001014,2.02e-14,2;CL:0001016,2.02e-14,2;CL:0002031,2.40e-12,120;CL:0002032,3.34e-12,161;CL:0000837,3.34e-12,161;CL:0002087,2.74e-11,115;CL:0000840,1.19e-10,5;CL:0001029,1.19e-10,5;CL:0000990,3.02e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;6.40e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-15!102;UBERON:0003061!2.19e-15!102;UBERON:0002193!1.68e-14!112;UBERON:0000178!6.37e-13!15;UBERON:0000179!6.37e-13!15;UBERON:0000463!6.37e-13!15;UBERON:0002106!1.47e-07!3;UBERON:0004854!1.47e-07!3;UBERON:0009034!1.47e-07!3;UBERON:0002095!1.47e-07!3;UBERON:0004782!1.47e-07!3;UBERON:0003281!1.47e-07!3;UBERON:0009664!1.47e-07!3;UBERON:0002296!1.47e-07!3;UBERON:0005602!1.47e-07!3;UBERON:0001179!1.47e-07!3;UBERON:0006293!1.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.07e-14;15!UBERON:0000179;2.07e-14;15!UBERON:0000463;2.07e-14;15!UBERON:0002390;4.32e-09;32!UBERON:0002372;9.40e-08;1!UBERON:0001961;9.40e-08;1!UBERON:0001744;9.40e-08;1!UBERON:0001042;9.40e-08;1!UBERON:0001735;9.40e-08;1!UBERON:0002193;3.75e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.71e-14,15;UBERON:0000179,1.71e-14,15;UBERON:0000463,1.71e-14,15;UBERON:0002372,1.04e-07,1;UBERON:0001961,1.04e-07,1;UBERON:0001744,1.04e-07,1;UBERON:0001735,1.04e-07,1;UBERON:0002193,2.05e-07,108;UBERON:0002390,4.59e-07,98;UBERON:0003061,4.59e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,1.16200800870452,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,8.79981222306614,7.09980194640771,3.55803701545422,3.84057200309856,6.4063357925762,5.17277195959035,9.25462821898807,10.494591299889,6.26134266020393,2.93618594685469,3.82273228125229,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.797747763113191,6.91622810485492,5.14795419702115,8.54352253057999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,7.02012795417713,2.67536092119711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,1.19115887728894,0.822724546172388,1.94541993357815,1.62009431171434,1.58625035258854,0,0,0,0.185803175125719,0,0,0,0.399158742865633,0,0,0,0.842391534340376,2.9670508274315,0.156679895773023,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,3.14963448172101,10.0594254092533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.515663103788617,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.248298857183432,0,0,0,0,0,2.02056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,2.01273793591026,0.320568492303233 | |||
|short_description=p1@ENST00000445865,p1@uc002sdf.1 | |||
}} |
Revision as of 19:19, 12 September 2013
Short description: | p1@ENST00000445865, p1@uc002sdf.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000445865_5end, CAGE_peak_1_at_uc002sdf.1_5end |
Coexpression cluster: | C1344_Dendritic_lymphoma_CD19_diffuse_adult_Neutrophils_lymphangiectasia |
Association with transcript: | 0bp_to_ENST00000445865, uc002sdf.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.41e-55 | 14 |
lymphocyte of B lineage | 2.06e-37 | 24 |
pro-B cell | 2.06e-37 | 24 |
plasmacytoid dendritic cell | 8.47e-21 | 3 |
leukocyte | 4.97e-17 | 136 |
hematopoietic stem cell | 4.48e-16 | 168 |
lymphoid lineage restricted progenitor cell | 4.85e-16 | 52 |
lymphocyte | 1.08e-15 | 53 |
common lymphoid progenitor | 1.08e-15 | 53 |
dendritic cell | 4.10e-15 | 10 |
hematopoietic cell | 4.95e-15 | 177 |
CD1a-positive Langerhans cell | 2.02e-14 | 2 |
immature CD1a-positive Langerhans cell | 2.02e-14 | 2 |
hematopoietic lineage restricted progenitor cell | 2.40e-12 | 120 |
hematopoietic oligopotent progenitor cell | 3.34e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.34e-12 | 161 |
nongranular leukocyte | 2.74e-11 | 115 |
immature conventional dendritic cell | 1.19e-10 | 5 |
common dendritic progenitor | 1.19e-10 | 5 |
conventional dendritic cell | 3.02e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.71e-14 | 15 |
haemolymphatic fluid | 1.71e-14 | 15 |
organism substance | 1.71e-14 | 15 |
tonsil | 1.04e-07 | 1 |
mucosa-associated lymphoid tissue | 1.04e-07 | 1 |
lymphoid tissue | 1.04e-07 | 1 |
tonsillar ring | 1.04e-07 | 1 |
hemolymphoid system | 2.05e-07 | 108 |
hematopoietic system | 4.59e-07 | 98 |
blood island | 4.59e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.