FFCP PHASE1:Hg19::chr3:67048412..67048423,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84541|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30691|TSSclassifier=W|UniProt=Q8NFY9|association_with_transcript=-303bp_to_ENST00000295568,NM_032505,uc003dmy.2,uc011bfv.1_5end|coexpression_cluster_id=C0|description=CAGE_peak_5_at_KBTBD8_5end|id=chr3:67048412..67048423,+|ontology_enrichment_celltype=CL:0002057!7.73e-119!42;CL:0000860!2.01e-110!45;CL:0002009!3.51e-82!65;CL:0002194!4.71e-80!63;CL:0000576!4.71e-80!63;CL:0000040!4.71e-80!63;CL:0000559!4.71e-80!63;CL:0000766!5.37e-78!76;CL:0000557!1.08e-74!71;CL:0000839!2.04e-71!70;CL:0000763!1.16e-53!112;CL:0000049!1.16e-53!112;CL:0000738!7.68e-49!140;CL:0002087!6.84e-47!119;CL:0002031!8.30e-45!124;CL:0000037!2.75e-38!172;CL:0000566!2.75e-38!172;CL:0002032!4.13e-38!165;CL:0000837!4.13e-38!165;CL:0000988!9.60e-36!182;CL:0000134!4.13e-15!358;CL:0002320!1.17e-14!365;CL:0000767!2.27e-14!3;CL:0000219!4.65e-13!390;CL:0002393!2.21e-12!9;CL:0002397!2.21e-12!9;CL:0000048!5.30e-12!430;CL:0000723!1.02e-11!436;CL:0000034!2.38e-11!444|ontology_enrichment_celltype_v019=CL:0000860;2.03e-61;33!CL:0002057;2.03e-61;33!CL:0000473;2.23e-44;39!CL:0000234;2.23e-44;39!CL:0000576;7.68e-41;48!CL:0000766;7.16e-27;69!CL:0002393;3.01e-15;6!CL:0002397;3.01e-15;6!CL:0000767;3.50e-14;3!CL:0002087;2.02e-09;104!CL:0000763;9.13e-09;100|ontology_enrichment_celltype_v019_2=CL:0000860,3.41e-74,42;CL:0002057,3.41e-74,42;CL:0000473,1.22e-64,48;CL:0000234,1.22e-64,48;CL:0000766,6.72e-52,72;CL:0002194,2.98e-51,59;CL:0000576,2.98e-51,59;CL:0000040,2.98e-51,59;CL:0000559,2.98e-51,59;CL:0002009,1.59e-49,61;CL:0000839,1.18e-45,66;CL:0000557,6.00e-45,67;CL:0000763,5.86e-34,108;CL:0000049,5.86e-34,108;CL:0000738,1.66e-26,136;CL:0002087,2.40e-25,115;CL:0002031,3.39e-24,120;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0000767,4.14e-14,3;CL:0002393,2.83e-10,9;CL:0002397,2.83e-10,9;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386|ontology_enrichment_development_v019=CL:0002057;5.34e-58;42!CL:0000049;7.11e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.53e-65!80;UBERON:0001474!1.72e-60!86;UBERON:0002390!6.81e-53!102;UBERON:0003061!6.81e-53!102;UBERON:0004765!1.85e-50!101;UBERON:0001434!1.85e-50!101;UBERON:0002193!1.61e-47!112;UBERON:0002405!1.95e-43!115;UBERON:0002204!2.27e-29!167;UBERON:0003081!2.19e-22!216;UBERON:0002384!4.87e-14!375;UBERON:0000926!2.84e-07!448;UBERON:0004120!2.84e-07!448;UBERON:0006603!2.84e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.03e-39,76;UBERON:0001474,2.14e-36,82;UBERON:0004765,5.52e-33,90;UBERON:0002405,7.45e-32,93;UBERON:0002390,4.02e-30,98;UBERON:0003061,4.02e-30,98;UBERON:0001434,1.77e-29,100;UBERON:0002193,3.92e-27,108;UBERON:0002204,1.03e-16,167;UBERON:0003081,2.67e-13,203;UBERON:0002384,4.95e-08,371;UBERON:0000926,1.31e-07,315;UBERON:0004120,1.31e-07,315;UBERON:0006603,1.31e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,2.01260960310899,0,0,0,0,0,0,1.10799081706375,1.20326668482085,1.08505435357926,0,0,0,0.290796477559129,0.377875943688809,0.727752183563449,1.16214518452842,1.6446715520873,3.09706370895104,1.7261543539329,2.56160706529101,2.83778675866302,3.7922024881028,11.6187243045089,5.41705946377367,0.752969358170419,0.545812300115692,2.47195832889593,0.918251677112708,1.60464513538047,0.639337125799041,0.329851300186716,0.997318288108159,0.426224750532694,0,1.13477044938228,0.622822248995575,5.27622197039161,4.69334626578181,5.2125322729228,0,0.368277635987565,0.949387162322653,0.422510572623884,0,0.419317291016752,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84541 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30691 | |||
|TSSclassifier=W | |||
|UniProt=Q8NFY9 | |||
|association_with_transcript=-303bp_to_ENST00000295568,NM_032505,uc003dmy.2,uc011bfv.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_KBTBD8_5end | |||
|id=chr3:67048412..67048423,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.73e-119!42;CL:0000860!2.01e-110!45;CL:0002009!3.51e-82!65;CL:0002194!4.71e-80!63;CL:0000576!4.71e-80!63;CL:0000040!4.71e-80!63;CL:0000559!4.71e-80!63;CL:0000766!5.37e-78!76;CL:0000557!1.08e-74!71;CL:0000839!2.04e-71!70;CL:0000763!1.16e-53!112;CL:0000049!1.16e-53!112;CL:0000738!7.68e-49!140;CL:0002087!6.84e-47!119;CL:0002031!8.30e-45!124;CL:0000037!2.75e-38!172;CL:0000566!2.75e-38!172;CL:0002032!4.13e-38!165;CL:0000837!4.13e-38!165;CL:0000988!9.60e-36!182;CL:0000134!4.13e-15!358;CL:0002320!1.17e-14!365;CL:0000767!2.27e-14!3;CL:0000219!4.65e-13!390;CL:0002393!2.21e-12!9;CL:0002397!2.21e-12!9;CL:0000048!5.30e-12!430;CL:0000723!1.02e-11!436;CL:0000034!2.38e-11!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-61;33!CL:0002057;2.03e-61;33!CL:0000473;2.23e-44;39!CL:0000234;2.23e-44;39!CL:0000576;7.68e-41;48!CL:0000766;7.16e-27;69!CL:0002393;3.01e-15;6!CL:0002397;3.01e-15;6!CL:0000767;3.50e-14;3!CL:0002087;2.02e-09;104!CL:0000763;9.13e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.41e-74,42;CL:0002057,3.41e-74,42;CL:0000473,1.22e-64,48;CL:0000234,1.22e-64,48;CL:0000766,6.72e-52,72;CL:0002194,2.98e-51,59;CL:0000576,2.98e-51,59;CL:0000040,2.98e-51,59;CL:0000559,2.98e-51,59;CL:0002009,1.59e-49,61;CL:0000839,1.18e-45,66;CL:0000557,6.00e-45,67;CL:0000763,5.86e-34,108;CL:0000049,5.86e-34,108;CL:0000738,1.66e-26,136;CL:0002087,2.40e-25,115;CL:0002031,3.39e-24,120;CL:0002032,5.08e-22,161;CL:0000837,5.08e-22,161;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0000767,4.14e-14,3;CL:0002393,2.83e-10,9;CL:0002397,2.83e-10,9;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.34e-58;42!CL:0000049;7.11e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.53e-65!80;UBERON:0001474!1.72e-60!86;UBERON:0002390!6.81e-53!102;UBERON:0003061!6.81e-53!102;UBERON:0004765!1.85e-50!101;UBERON:0001434!1.85e-50!101;UBERON:0002193!1.61e-47!112;UBERON:0002405!1.95e-43!115;UBERON:0002204!2.27e-29!167;UBERON:0003081!2.19e-22!216;UBERON:0002384!4.87e-14!375;UBERON:0000926!2.84e-07!448;UBERON:0004120!2.84e-07!448;UBERON:0006603!2.84e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.03e-39,76;UBERON:0001474,2.14e-36,82;UBERON:0004765,5.52e-33,90;UBERON:0002405,7.45e-32,93;UBERON:0002390,4.02e-30,98;UBERON:0003061,4.02e-30,98;UBERON:0001434,1.77e-29,100;UBERON:0002193,3.92e-27,108;UBERON:0002204,1.03e-16,167;UBERON:0003081,2.67e-13,203;UBERON:0002384,4.95e-08,371;UBERON:0000926,1.31e-07,315;UBERON:0004120,1.31e-07,315;UBERON:0006603,1.31e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,2.01260960310899,0,0,0,0,0,0,1.10799081706375,1.20326668482085,1.08505435357926,0,0,0,0.290796477559129,0.377875943688809,0.727752183563449,1.16214518452842,1.6446715520873,3.09706370895104,1.7261543539329,2.56160706529101,2.83778675866302,3.7922024881028,11.6187243045089,5.41705946377367,0.752969358170419,0.545812300115692,2.47195832889593,0.918251677112708,1.60464513538047,0.639337125799041,0.329851300186716,0.997318288108159,0.426224750532694,0,1.13477044938228,0.622822248995575,5.27622197039161,4.69334626578181,5.2125322729228,0,0.368277635987565,0.949387162322653,0.422510572623884,0,0.419317291016752,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@KBTBD8 | |||
}} |
Revision as of 01:13, 13 September 2013
Short description: | p5@KBTBD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KBTBD8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -303bp_to_ENST00000295568, NM_032505, uc003dmy.2, uc011bfv.1_5end |
EntrezGene: | KBTBD8 |
HGNC: | 30691 |
UniProt: | Q8NFY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.41e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-74 | 42 |
defensive cell | 1.22e-64 | 48 |
phagocyte | 1.22e-64 | 48 |
myeloid leukocyte | 6.72e-52 | 72 |
monopoietic cell | 2.98e-51 | 59 |
monocyte | 2.98e-51 | 59 |
monoblast | 2.98e-51 | 59 |
promonocyte | 2.98e-51 | 59 |
macrophage dendritic cell progenitor | 1.59e-49 | 61 |
myeloid lineage restricted progenitor cell | 1.18e-45 | 66 |
granulocyte monocyte progenitor cell | 6.00e-45 | 67 |
myeloid cell | 5.86e-34 | 108 |
common myeloid progenitor | 5.86e-34 | 108 |
leukocyte | 1.66e-26 | 136 |
nongranular leukocyte | 2.40e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 3.39e-24 | 120 |
hematopoietic oligopotent progenitor cell | 5.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-22 | 161 |
hematopoietic stem cell | 5.31e-21 | 168 |
hematopoietic cell | 8.29e-20 | 177 |
basophil | 4.14e-14 | 3 |
intermediate monocyte | 2.83e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.83e-10 | 9 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.03e-39 | 76 |
bone element | 2.14e-36 | 82 |
skeletal element | 5.52e-33 | 90 |
immune system | 7.45e-32 | 93 |
hematopoietic system | 4.02e-30 | 98 |
blood island | 4.02e-30 | 98 |
skeletal system | 1.77e-29 | 100 |
hemolymphoid system | 3.92e-27 | 108 |
musculoskeletal system | 1.03e-16 | 167 |
lateral plate mesoderm | 2.67e-13 | 203 |
connective tissue | 4.95e-08 | 371 |
mesoderm | 1.31e-07 | 315 |
mesoderm-derived structure | 1.31e-07 | 315 |
presumptive mesoderm | 1.31e-07 | 315 |
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