FFCP PHASE1:Hg19::chr4:145061865..145061877,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2993|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4702|TSSclassifier=S|UniProt=B8Q185,E9PCC7|association_with_transcript=-19bp_to_ENST00000324022,ENST00000394119,ENST00000509346,ENST00000514603_5end|coexpression_cluster_id=C33|description=CAGE_peak_1_at_GYPA_5end|id=chr4:145061865..145061877,-|ontology_enrichment_celltype=CL:0000764!9.15e-22!2;CL:0000765!9.15e-22!2;CL:0000050!9.15e-22!2;CL:0000038!9.15e-22!2;CL:0000558!9.15e-22!2;CL:0000547!9.15e-22!2;CL:0000549!9.15e-22!2;CL:0000550!9.15e-22!2;CL:0000552!9.15e-22!2;CL:0000763!1.57e-07!112;CL:0000049!1.57e-07!112|ontology_enrichment_celltype_v019=CL:0000764;1.13e-57;2!CL:0000558;1.13e-57;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.13e-57,2;CL:0000765,1.13e-57,2;CL:0000050,1.13e-57,2;CL:0000038,1.13e-57,2;CL:0000558,1.13e-57,2;CL:0000547,1.13e-57,2;CL:0000549,1.13e-57,2;CL:0000550,1.13e-57,2;CL:0000552,1.13e-57,2;CL:0000763,1.37e-09,108;CL:0000049,1.37e-09,108|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!1.49e-31!8;DOID:8692!7.45e-20!31;DOID:1240!1.35e-15!39;DOID:2531!1.05e-11!51;DOID:0060083!1.05e-11!51;DOID:8552!1.78e-11!1|ontology_enrichment_disease_v019=DOID:1036;3.02e-32;8!DOID:8692;6.87e-15;31!DOID:1240;2.89e-11;39!DOID:2531;2.23e-07;51!DOID:0060083;2.23e-07;51|ontology_enrichment_disease_v019_2=DOID:1036,2.44e-32,8;DOID:8692,4.84e-15,31;DOID:1240,4.57e-12,39;DOID:2531,2.43e-09,51;DOID:0060083,2.43e-09,51|ontology_enrichment_uberon=UBERON:0000178!1.54e-16!15;UBERON:0000179!1.54e-16!15;UBERON:0000463!1.54e-16!15;UBERON:0002171!3.63e-11!1;UBERON:0006518!3.63e-11!1;UBERON:0008949!3.63e-11!1;UBERON:0000101!3.63e-11!1;UBERON:0002167!3.63e-11!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5941123520479,14.6403852573944,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,1.80476528493745,0.784250137270958,1.34257269580674,0,1.74830236878417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@GYPA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4702 | |||
|TSSclassifier=S | |||
|UniProt=B8Q185,E9PCC7 | |||
|association_with_transcript=-19bp_to_ENST00000324022,ENST00000394119,ENST00000509346,ENST00000514603_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_GYPA_5end | |||
|id=chr4:145061865..145061877,- | |||
|ontology_enrichment_celltype=CL:0000764!9.15e-22!2;CL:0000765!9.15e-22!2;CL:0000050!9.15e-22!2;CL:0000038!9.15e-22!2;CL:0000558!9.15e-22!2;CL:0000547!9.15e-22!2;CL:0000549!9.15e-22!2;CL:0000550!9.15e-22!2;CL:0000552!9.15e-22!2;CL:0000763!1.57e-07!112;CL:0000049!1.57e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.13e-57;2!CL:0000558;1.13e-57;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.13e-57,2;CL:0000765,1.13e-57,2;CL:0000050,1.13e-57,2;CL:0000038,1.13e-57,2;CL:0000558,1.13e-57,2;CL:0000547,1.13e-57,2;CL:0000549,1.13e-57,2;CL:0000550,1.13e-57,2;CL:0000552,1.13e-57,2;CL:0000763,1.37e-09,108;CL:0000049,1.37e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.49e-31!8;DOID:8692!7.45e-20!31;DOID:1240!1.35e-15!39;DOID:2531!1.05e-11!51;DOID:0060083!1.05e-11!51;DOID:8552!1.78e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.02e-32;8!DOID:8692;6.87e-15;31!DOID:1240;2.89e-11;39!DOID:2531;2.23e-07;51!DOID:0060083;2.23e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.44e-32,8;DOID:8692,4.84e-15,31;DOID:1240,4.57e-12,39;DOID:2531,2.43e-09,51;DOID:0060083,2.43e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.54e-16!15;UBERON:0000179!1.54e-16!15;UBERON:0000463!1.54e-16!15;UBERON:0002171!3.63e-11!1;UBERON:0006518!3.63e-11!1;UBERON:0008949!3.63e-11!1;UBERON:0000101!3.63e-11!1;UBERON:0002167!3.63e-11!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5941123520479,14.6403852573944,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,1.80476528493745,0.784250137270958,1.34257269580674,0,1.74830236878417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@GYPA | |||
}} |
Revision as of 02:37, 13 September 2013
Short description: | p1@GYPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GYPA_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -19bp_to_ENST00000324022, ENST00000394119, ENST00000509346, ENST00000514603_5end |
EntrezGene: | GYPA |
HGNC: | 4702 |
UniProt: | B8Q185E9PCC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.13e-57 | 2 |
erythroblast | 1.13e-57 | 2 |
megakaryocyte-erythroid progenitor cell | 1.13e-57 | 2 |
erythroid progenitor cell | 1.13e-57 | 2 |
reticulocyte | 1.13e-57 | 2 |
proerythroblast | 1.13e-57 | 2 |
basophilic erythroblast | 1.13e-57 | 2 |
polychromatophilic erythroblast | 1.13e-57 | 2 |
orthochromatic erythroblast | 1.13e-57 | 2 |
myeloid cell | 1.37e-09 | 108 |
common myeloid progenitor | 1.37e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.44e-32 | 8 |
myeloid leukemia | 4.84e-15 | 31 |
leukemia | 4.57e-12 | 39 |
hematologic cancer | 2.43e-09 | 51 |
immune system cancer | 2.43e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.