FFCP PHASE1:Mm9::chr15:12251068..12251079,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:12251068..12251079,-|id=chr15:12251068..12251079,-|ontology_enrichment_celltype=CL:0002563!2.33e-10!9;CL:0002251!2.33e-10!9;CL:0000063!5.43e-09!66;CL:0000075!8.52e-09!7;CL:0000239!8.15e-08!6;CL:0000677!8.15e-08!6;CL:0000212!8.15e-08!6;CL:0000584!8.15e-08!6;CL:0000066!1.00e-07!25;CL:0000144!2.96e-07!121;CL:0000012!2.96e-07!121|ontology_enrichment_celltype_v019_2=CL:0000239,7.79e-10,6;CL:0000677,7.79e-10,6;CL:0000584,7.79e-10,6;CL:0000075,1.66e-08,7;CL:0000815,1.14e-07,1;CL:0000792,1.14e-07,1;CL:0000213,2.05e-07,1;CL:0002078,2.05e-07,1;CL:0000115,2.05e-07,1;CL:0002262,2.05e-07,1;CL:1000398,2.05e-07,1;CL:0000355,4.50e-07,9;CL:0002563,9.95e-07,9;CL:0002251,9.95e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,1.89e-17,6|ontology_enrichment_uberon=UBERON:0000485!3.68e-12!11;UBERON:0003350!2.33e-10!9;UBERON:0004808!2.33e-10!9;UBERON:0001277!2.33e-10!9|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.05e-07,1;UBERON:0001281,2.05e-07,1;UBERON:0000353,2.05e-07,1;UBERON:0003497,2.05e-07,1;UBERON:0003909,2.05e-07,1;UBERON:0003928,2.05e-07,1;UBERON:0003835,2.05e-07,1;UBERON:0003513,2.05e-07,1;UBERON:0001280,2.05e-07,1;UBERON:0004647,2.05e-07,1;UBERON:0002294,2.05e-07,1;UBERON:0001173,2.05e-07,1;UBERON:0004912,2.05e-07,1;UBERON:0005171,2.05e-07,1;UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9;UBERON:0003350,9.95e-07,9;UBERON:0004808,9.95e-07,9;UBERON:0001277,9.95e-07,9|phase1_expression=0.320297694209588,1.04692622291808,0.909998478779072,1.51232105653415,2.00358291978539,0.503637815735669,0.467225281191051,2.06597317506522,0.281577444303333,0.468129052643987,0,0,1.02720437958723,0.786783621770977,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0.261199789138935,0.159992422793407,0,1.14846392823004,0,0.430942465371778,0,0,0,0.635030673459631,1.84519436275371,0,0.577703239502549,0.498703936075477,0.204169356262369,2.92972141515835,2.3440060335714,2.09409497589519,11.7646297606203,5.46436387966757,2.42755176515577,0.251793635951155,0,0,0,0,0.659058548203415,0.388859798148567,0,0,0.503347818173209,0,0.336093799142464,0,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,0,0,0.259786004602869,0,0.563373679106722,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0.599902730993408,0.381210681219194,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr15:12251068..12251079,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:12251068..12251079,- | |||
|id=chr15:12251068..12251079,- | |||
|ontology_enrichment_celltype=CL:0002563!2.33e-10!9;CL:0002251!2.33e-10!9;CL:0000063!5.43e-09!66;CL:0000075!8.52e-09!7;CL:0000239!8.15e-08!6;CL:0000677!8.15e-08!6;CL:0000212!8.15e-08!6;CL:0000584!8.15e-08!6;CL:0000066!1.00e-07!25;CL:0000144!2.96e-07!121;CL:0000012!2.96e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.79e-10,6;CL:0000677,7.79e-10,6;CL:0000584,7.79e-10,6;CL:0000075,1.66e-08,7;CL:0000815,1.14e-07,1;CL:0000792,1.14e-07,1;CL:0000213,2.05e-07,1;CL:0002078,2.05e-07,1;CL:0000115,2.05e-07,1;CL:0002262,2.05e-07,1;CL:1000398,2.05e-07,1;CL:0000355,4.50e-07,9;CL:0002563,9.95e-07,9;CL:0002251,9.95e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,1.89e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0000485!3.68e-12!11;UBERON:0003350!2.33e-10!9;UBERON:0004808!2.33e-10!9;UBERON:0001277!2.33e-10!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.05e-07,1;UBERON:0001281,2.05e-07,1;UBERON:0000353,2.05e-07,1;UBERON:0003497,2.05e-07,1;UBERON:0003909,2.05e-07,1;UBERON:0003928,2.05e-07,1;UBERON:0003835,2.05e-07,1;UBERON:0003513,2.05e-07,1;UBERON:0001280,2.05e-07,1;UBERON:0004647,2.05e-07,1;UBERON:0002294,2.05e-07,1;UBERON:0001173,2.05e-07,1;UBERON:0004912,2.05e-07,1;UBERON:0005171,2.05e-07,1;UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9;UBERON:0003350,9.95e-07,9;UBERON:0004808,9.95e-07,9;UBERON:0001277,9.95e-07,9 | |||
|phase1_expression=0.320297694209588,1.04692622291808,0.909998478779072,1.51232105653415,2.00358291978539,0.503637815735669,0.467225281191051,2.06597317506522,0.281577444303333,0.468129052643987,0,0,1.02720437958723,0.786783621770977,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0.261199789138935,0.159992422793407,0,1.14846392823004,0,0.430942465371778,0,0,0,0.635030673459631,1.84519436275371,0,0.577703239502549,0.498703936075477,0.204169356262369,2.92972141515835,2.3440060335714,2.09409497589519,11.7646297606203,5.46436387966757,2.42755176515577,0.251793635951155,0,0,0,0,0.659058548203415,0.388859798148567,0,0,0.503347818173209,0,0.336093799142464,0,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,0,0,0.259786004602869,0,0.563373679106722,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0.599902730993408,0.381210681219194,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr15:12251068..12251079,- | |||
}} |
Revision as of 10:13, 13 September 2013
Short description: | p@chr15:12251068..12251079, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:12251068..12251079, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.79e-10 | 6 |
gut absorptive cell | 7.79e-10 | 6 |
enterocyte | 7.79e-10 | 6 |
columnar/cuboidal epithelial cell | 1.66e-08 | 7 |
regulatory T cell | 1.14e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.14e-07 | 1 |
lining cell | 2.05e-07 | 1 |
meso-epithelial cell | 2.05e-07 | 1 |
endothelial cell | 2.05e-07 | 1 |
endothelial cell of sinusoid | 2.05e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.05e-07 | 1 |
multi-potent skeletal muscle stem cell | 4.50e-07 | 9 |
intestinal epithelial cell | 9.95e-07 | 9 |
epithelial cell of alimentary canal | 9.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.05e-07 | 1 |
hepatic sinusoid | 2.05e-07 | 1 |
parenchyma | 2.05e-07 | 1 |
abdomen blood vessel | 2.05e-07 | 1 |
sinusoid | 2.05e-07 | 1 |
digestive system duct | 2.05e-07 | 1 |
abdominal segment blood vessel | 2.05e-07 | 1 |
trunk blood vessel | 2.05e-07 | 1 |
liver parenchyma | 2.05e-07 | 1 |
liver lobule | 2.05e-07 | 1 |
biliary system | 2.05e-07 | 1 |
biliary tree | 2.05e-07 | 1 |
biliary bud | 2.05e-07 | 1 |
hepatic duct | 2.05e-07 | 1 |
skeletal muscle tissue | 4.50e-07 | 9 |
striated muscle tissue | 4.50e-07 | 9 |
muscle tissue | 4.50e-07 | 9 |
multilaminar epithelium | 4.50e-07 | 9 |
epithelial vesicle | 4.50e-07 | 9 |
musculature | 4.50e-07 | 9 |
somite | 4.50e-07 | 9 |
myotome | 4.50e-07 | 9 |
presomitic mesoderm | 4.50e-07 | 9 |
presumptive segmental plate | 4.50e-07 | 9 |
dermomyotome | 4.50e-07 | 9 |
trunk paraxial mesoderm | 4.50e-07 | 9 |
epithelium of mucosa | 9.95e-07 | 9 |
gastrointestinal system epithelium | 9.95e-07 | 9 |
intestinal epithelium | 9.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.00e-20 | 3 |
muscle cancer | 4.00e-20 | 3 |
organ system cancer | 1.89e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.