FFCP PHASE1:Mm9::chr16:30064437..30064449,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15205|HGNC=|MCL_coexpression_id=26|UniProt=|association_with_transcript=-20bp_to_ENSMUST00000160592_5end|description=CAGE_peak_11_at_Hes1_5end|id=chr16:30064437..30064449,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0000222,1.34e-13,7;CL:0000215,1.13e-08,3;CL:0002494,1.34e-08,3;CL:0000737,1.34e-08,3;CL:0000746,1.34e-08,3;CL:0000513,1.34e-08,3;CL:0000068,1.88e-08,3;CL:0002202,1.88e-08,3;CL:0000069,1.88e-08,3;CL:0002632,1.88e-08,3;CL:0002368,1.88e-08,3;CL:0000307,1.88e-08,3;CL:0000377,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1;UBERON:0003126,1.88e-08,3;UBERON:0001005,1.88e-08,3;UBERON:0007196,1.88e-08,3;UBERON:0001558,1.88e-08,3|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0,0.771778308107841,0,2.06268836910977,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0,0.151143120213571,6.08715426273523,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,1.51657333504435,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0.130120442962704,0,0.180062129805349,0.452114453507145,0.544291993210623,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.540186184383045,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.210407459670956,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0,0.315270288212382,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0.136694227721025,0,1.5298058699447,0.279902904647316,0.829199842826543,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.436725127492355,0.134864346384821,0.41326727862668,0.523511883968059,0,0,0.56369293868419,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0.419437377702843,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0.269141569828427,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0,0,0.183843508450014,0,0.412070114477788,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p11@Hes1}} | ||
|EntrezGene=15205 | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENSMUST00000160592_5end | |||
|description=CAGE_peak_11_at_Hes1_5end | |||
|id=chr16:30064437..30064449,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0000222,1.34e-13,7;CL:0000215,1.13e-08,3;CL:0002494,1.34e-08,3;CL:0000737,1.34e-08,3;CL:0000746,1.34e-08,3;CL:0000513,1.34e-08,3;CL:0000068,1.88e-08,3;CL:0002202,1.88e-08,3;CL:0000069,1.88e-08,3;CL:0002632,1.88e-08,3;CL:0002368,1.88e-08,3;CL:0000307,1.88e-08,3;CL:0000377,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1;UBERON:0003126,1.88e-08,3;UBERON:0001005,1.88e-08,3;UBERON:0007196,1.88e-08,3;UBERON:0001558,1.88e-08,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0,0.771778308107841,0,2.06268836910977,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0,0.151143120213571,6.08715426273523,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,1.51657333504435,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0.130120442962704,0,0.180062129805349,0.452114453507145,0.544291993210623,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.540186184383045,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.210407459670956,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0,0.315270288212382,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0.136694227721025,0,1.5298058699447,0.279902904647316,0.829199842826543,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.436725127492355,0.134864346384821,0.41326727862668,0.523511883968059,0,0,0.56369293868419,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0.419437377702843,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0.269141569828427,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0,0,0.183843508450014,0,0.412070114477788,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p11@Hes1 | |||
}} |
Revision as of 12:23, 13 September 2013
Short description: | p11@Hes1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Hes1_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | -20bp_to_ENSMUST00000160592_5end |
EntrezGene: | Hes1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.06e-23 | 1 |
meso-epithelial cell | 3.06e-23 | 1 |
endothelial cell | 3.06e-23 | 1 |
endothelial cell of sinusoid | 3.06e-23 | 1 |
endothelial cell of hepatic sinusoid | 3.06e-23 | 1 |
mesodermal cell | 1.34e-13 | 7 |
barrier cell | 1.13e-08 | 3 |
cardiocyte | 1.34e-08 | 3 |
striated muscle cell | 1.34e-08 | 3 |
cardiac muscle cell | 1.34e-08 | 3 |
cardiac muscle myoblast | 1.34e-08 | 3 |
duct epithelial cell | 1.88e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.88e-08 | 3 |
branched duct epithelial cell | 1.88e-08 | 3 |
epithelial cell of lower respiratory tract | 1.88e-08 | 3 |
respiratory epithelial cell | 1.88e-08 | 3 |
tracheal epithelial cell | 1.88e-08 | 3 |
tracheoblast | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.06e-23 | 1 |
hepatic sinusoid | 3.06e-23 | 1 |
parenchyma | 3.06e-23 | 1 |
abdomen blood vessel | 3.06e-23 | 1 |
sinusoid | 3.06e-23 | 1 |
digestive system duct | 3.06e-23 | 1 |
abdominal segment blood vessel | 3.06e-23 | 1 |
trunk blood vessel | 3.06e-23 | 1 |
liver parenchyma | 3.06e-23 | 1 |
liver lobule | 3.06e-23 | 1 |
biliary system | 3.06e-23 | 1 |
biliary tree | 3.06e-23 | 1 |
biliary bud | 3.06e-23 | 1 |
hepatic duct | 3.06e-23 | 1 |
trachea | 1.88e-08 | 3 |
respiratory airway | 1.88e-08 | 3 |
tracheobronchial tree | 1.88e-08 | 3 |
lower respiratory tract | 1.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.