FFCP PHASE1:Hg19::chr5:141845..141850,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:141845..141850,+|id=chr5:141845..141850,+|ontology_enrichment_celltype=CL:0000039!5.17e-08!7;CL:0000586!5.17e-08!7;CL:0002605!1.09e-07!3;CL:0002319!3.74e-07!25|ontology_enrichment_celltype_v019=CL:0000306;2.26e-08;4!CL:0002222;2.26e-08;4!CL:0002224;2.26e-08;4|ontology_enrichment_celltype_v019_2=CL:0000306,1.96e-08,4;CL:0002222,1.96e-08,4;CL:0002224,1.96e-08,4|ontology_enrichment_development_v019=UBERON:0007123;6.04e-07;5|ontology_enrichment_disease=DOID:0050687!9.25e-11!143;DOID:3095!5.90e-09!22;DOID:2994!5.90e-09!22;DOID:305!1.41e-07!106|ontology_enrichment_disease_v019=DOID:5409;1.70e-08;4|ontology_enrichment_disease_v019_2=DOID:5409,1.70e-08,4|ontology_enrichment_uberon=UBERON:0002346!1.65e-11!90;UBERON:0003075!1.83e-10!86;UBERON:0007284!1.83e-10!86;UBERON:0001017!4.49e-09!82;UBERON:0005743!2.28e-08!86;UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0001049!1.07e-07!57;UBERON:0005068!1.07e-07!57;UBERON:0006241!1.07e-07!57;UBERON:0007135!1.07e-07!57;UBERON:0002616!2.75e-07!59;UBERON:0000924!8.08e-07!173;UBERON:0006601!8.08e-07!173|ontology_enrichment_uberon_v019=UBERON:0000007;2.05e-15;2!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0010077;2.26e-08;4!UBERON:0005389;2.26e-08;4!UBERON:0000484;2.26e-08;4!UBERON:0000965;2.26e-08;4!UBERON:0001803;2.26e-08;4!UBERON:0002046;6.04e-07;5!UBERON:0001872;6.04e-07;5!UBERON:0002021;6.04e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.78e-15,2;UBERON:0010077,1.96e-08,4;UBERON:0005389,1.96e-08,4;UBERON:0000484,1.96e-08,4;UBERON:0002546,1.96e-08,4;UBERON:0000965,1.96e-08,4;UBERON:0001803,1.96e-08,4;UBERON:0003073,1.96e-08,4;UBERON:0005426,1.96e-08,4;UBERON:0003296,2.11e-08,4;UBERON:0010133,2.11e-08,4;UBERON:0003056,9.09e-08,61;UBERON:0001872,6.04e-07,5;UBERON:0002046,6.39e-07,5;UBERON:0004117,6.39e-07,5;UBERON:0007689,6.39e-07,5;UBERON:0007123,6.39e-07,5;UBERON:0003091,6.39e-07,5;UBERON:0002021,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.410623275218653,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,2.3056390438806,0,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0.936669811613763,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0.123935764259002,0,0,0.552032215008773,0,0,0,0,0,0,0,1.00828678488687,0.138314504928436,0,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,1.09394961803644,0,0,0,0.255524855279191,0,0,0,1.13831095675649,0,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0,3.01925687133347,0,0,0.470317296361523,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0.253397002022874,0.305966489225945,0,0.275684698604535,0.50141507858475,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,1.0105859447911,0,0,0,0,0.332660356546013,0.569822880276821,0,0,0,0,0,0,0,0,0|short_description=p@chr5:141845..141850,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:141845..141850,+ | |||
|id=chr5:141845..141850,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.17e-08!7;CL:0000586!5.17e-08!7;CL:0002605!1.09e-07!3;CL:0002319!3.74e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.26e-08;4!CL:0002222;2.26e-08;4!CL:0002224;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.96e-08,4;CL:0002222,1.96e-08,4;CL:0002224,1.96e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.04e-07;5 | |||
|ontology_enrichment_disease=DOID:0050687!9.25e-11!143;DOID:3095!5.90e-09!22;DOID:2994!5.90e-09!22;DOID:305!1.41e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.65e-11!90;UBERON:0003075!1.83e-10!86;UBERON:0007284!1.83e-10!86;UBERON:0001017!4.49e-09!82;UBERON:0005743!2.28e-08!86;UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0001049!1.07e-07!57;UBERON:0005068!1.07e-07!57;UBERON:0006241!1.07e-07!57;UBERON:0007135!1.07e-07!57;UBERON:0002616!2.75e-07!59;UBERON:0000924!8.08e-07!173;UBERON:0006601!8.08e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.05e-15;2!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0010077;2.26e-08;4!UBERON:0005389;2.26e-08;4!UBERON:0000484;2.26e-08;4!UBERON:0000965;2.26e-08;4!UBERON:0001803;2.26e-08;4!UBERON:0002046;6.04e-07;5!UBERON:0001872;6.04e-07;5!UBERON:0002021;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.78e-15,2;UBERON:0010077,1.96e-08,4;UBERON:0005389,1.96e-08,4;UBERON:0000484,1.96e-08,4;UBERON:0002546,1.96e-08,4;UBERON:0000965,1.96e-08,4;UBERON:0001803,1.96e-08,4;UBERON:0003073,1.96e-08,4;UBERON:0005426,1.96e-08,4;UBERON:0003296,2.11e-08,4;UBERON:0010133,2.11e-08,4;UBERON:0003056,9.09e-08,61;UBERON:0001872,6.04e-07,5;UBERON:0002046,6.39e-07,5;UBERON:0004117,6.39e-07,5;UBERON:0007689,6.39e-07,5;UBERON:0007123,6.39e-07,5;UBERON:0003091,6.39e-07,5;UBERON:0002021,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.410623275218653,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,2.3056390438806,0,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0.936669811613763,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0.123935764259002,0,0,0.552032215008773,0,0,0,0,0,0,0,1.00828678488687,0.138314504928436,0,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,1.09394961803644,0,0,0,0.255524855279191,0,0,0,1.13831095675649,0,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0,3.01925687133347,0,0,0.470317296361523,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0.253397002022874,0.305966489225945,0,0.275684698604535,0.50141507858475,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,1.0105859447911,0,0,0,0,0.332660356546013,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:141845..141850,+ | |||
}} |
Revision as of 13:40, 13 September 2013
Short description: | p@chr5:141845..141850, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:141845..141850, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.96e-08 | 4 |
vertebrate lens cell | 1.96e-08 | 4 |
lens epithelial cell | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.78e-15 | 2 |
cuboidal epithelium | 1.96e-08 | 4 |
transparent eye structure | 1.96e-08 | 4 |
simple cuboidal epithelium | 1.96e-08 | 4 |
cranial placode | 1.96e-08 | 4 |
lens of camera-type eye | 1.96e-08 | 4 |
epithelium of lens | 1.96e-08 | 4 |
lens placode | 1.96e-08 | 4 |
lens vesicle | 1.96e-08 | 4 |
gland of diencephalon | 2.11e-08 | 4 |
neuroendocrine gland | 2.11e-08 | 4 |
pre-chordal neural plate | 9.09e-08 | 61 |
parietal lobe | 6.04e-07 | 5 |
thyroid gland | 6.39e-07 | 5 |
pharyngeal pouch | 6.39e-07 | 5 |
thyroid diverticulum | 6.39e-07 | 5 |
pharyngeal pouch 2 | 6.39e-07 | 5 |
thyroid primordium | 6.39e-07 | 5 |
occipital lobe | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.70e-08 | 4 |
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