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FFCP PHASE1:Mm9::chr17:36117059..36117078,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=14670|HGNC=|UniProt=E9PYS8,P36916,Q52KE3|association_with_transcript=159bp_to_ENSMUST00000166679,NM_008136,uc008cjo.1_5end|description=CAGE_peak_2_at_Gnl1_5end|id=chr17:36117059..36117078,+|ontology_enrichment_celltype=CL:0002321!3.81e-15!70;CL:0000220!3.81e-15!70;CL:0000055!3.04e-11!50;CL:0000221!5.80e-11!44;CL:0000133!5.80e-11!44;CL:0002319!1.76e-10!43;CL:0000548!8.54e-10!115;CL:0000004!8.54e-10!115;CL:0000255!8.54e-10!115;CL:0002371!1.51e-08!118;CL:0000117!1.88e-08!23;CL:0000337!1.88e-08!23;CL:0000144!1.92e-08!121;CL:0000012!1.92e-08!121;CL:0000393!8.54e-08!39;CL:0000211!8.54e-08!39|ontology_enrichment_celltype_v019_2=CL:0002321,3.76e-15,70;CL:0000221,5.65e-11,44;CL:0000133,5.65e-11,44;CL:0002319,1.72e-10,43;CL:0000117,1.81e-08,23;CL:0000337,1.81e-08,23;CL:0000393,8.44e-08,39;CL:0000211,8.44e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.31e-10!75;UBERON:0001016!2.31e-10!75;UBERON:0001017!2.45e-10!73;UBERON:0005743!2.45e-10!73;UBERON:0001049!1.26e-07!52;UBERON:0005068!1.26e-07!52;UBERON:0006241!1.26e-07!52;UBERON:0007135!1.26e-07!52;UBERON:0000955!1.37e-07!50;UBERON:0006238!1.37e-07!50;UBERON:0002616!1.38e-07!49;UBERON:0004121!4.29e-07!102;UBERON:0000924!4.29e-07!102;UBERON:0006601!4.29e-07!102;UBERON:0000033!4.78e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-10,75;UBERON:0001017,2.03e-10,73;UBERON:0000073,8.54e-09,54;UBERON:0001049,1.04e-07,52;UBERON:0005068,1.04e-07,52;UBERON:0006241,1.04e-07,52;UBERON:0007135,1.04e-07,52;UBERON:0004121,2.03e-07,95;UBERON:0000924,2.03e-07,95;UBERON:0006601,2.03e-07,95|phase1_expression=7.36684696682052,8.72438519098403,5.91499011206397,5.14189159221611,10.0179145989269,3.52546471014969,1.86890112476421,0.387369970324729,6.75785866328,6.55380673701582,2.05461561870606,2.23362045186942,0.342401459862411,0.0874204024189974,0.666219523631325,1.41732687172878,0.699561878128147,0.788655413395594,0.548457734422955,0.42438965179803,3.06155844543851,2.18440092641948,0.783599367416806,3.51983330145495,2.06468352960453,5.16808767703518,6.8921919385452,4.52489588640367,4.75058548640935,4.28451220591882,4.8780712344167,1.90509202037889,4.92051830067656,0,3.75507105676657,1.66234645358492,2.04169356262369,0,1.5626706890476,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,2.89562681343828,4.66333883609767,5.50640256485045,12.5182615095686,7.84890562969608,9.22681967484782,6.61061656852564,8.39918529752175,10.062679505548,1.67782606057736,0.725362142011344,1.34437519656986,4.11615097657515,2.86533439938757,3.6097046459421,4.24864567805155,3.1739458756322,2.53532561402472,10.8430250262122,11.5608323494448,4.94944844504769,0,3.5524005747305,14.081205194365,25.3584081512226,4.35496371695606,5.13022565660425,4.83747411108179,6.56997264128748,4.19650227808066,3.1847607795888,4.31304619582064,2.75765635983006,12.1127469099328,6.38436690425939,7.68032666281217,3.16527090552465,5.21479568533735,5.73004707612436,8.93385596804419,12.9435400307286,8.55670187550137,2.65165726926301,3.27454865837937,3.54158947068071,2.65041676666144,2.49386148352392,1.73918693221007,0.860423876981386,2.03991400112325,2.69851595818909,0.649776417447669,2.68816132258401,1.40444420131752,6.64678258054425,7.79358013808606,9.18682893726885,6.4787973097273,5.13305909657271,10.1922095882658,14.2213340630666,3.89683873820185,4.30711771307668,4.54972000513305,2.51204535381932,0.517875767294343,2.52351636410202,4.8575891494518,1.52232739156071,2.7673859670727,1.50722640552623,1.88141931417128,3.01599819191221,13.1013332899218,1.15679485535929,0.884610551949874,1.94120219936891,2.42925670306433,1.45462575940567,0,2.34224637609238,1.04723353406728,1.53274233125155,1.67741174308288,1.79970819298022,1.27070227073065,3.44518470631092,2.28750301409313,2.89005009859588,3.12883776346098,2.30143911597297,2.70124457927428,2.59586020908412,3.36069900706044,1.99051152976149,2.27450482590307,0.210441855886474,3.3831315170303,5.0578462975364,2.34080768746954,2.41127708537144,2.78949646520444,1.66547836370305,3.09215691047105,1.03481348295606,5.6047678162539,3.9712276835242,2.28736461413134,3.94552318369635,1.94633074457919,0.696504333044333,1.02891068203972,3.18454826909589,0,1.28673953557358,1.70498099637356,2.27838349789052,3.28336483973535,2.70093092191522,2.84093682702252,1.96764231747404,1.85120535464854,2.55787339225449,4.82892122519315,2.45207218971056,2.46839774870221,1.80584210487005,1.54030738137126,1.90059983652932,1.09775057645525,0.671032093801859,2.10289948564127,2.46971069710283,2.97376904685418,2.3800550999719,4.47905326123991,2.55460339046482,1.9330119198314,2.01683524623343,1.33426826306922,1.33157938278791,3.32170343081158,2.47048432086016,3.01602250560323,2.98434708061726,3.31438948102504,1.79763881730844,0.432276099749388,1.1948476395262,3.03468641524931,2.39921876480431,2.25415471346161,2.44381593414377,1.93952487167626,2.10407459670956,1.83385957660346,1.91893192373483,2.511979645462,2.9615319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|EntrezGene=14670
|HGNC=
|UniProt=E9PYS8,P36916,Q52KE3
|association_with_transcript=159bp_to_ENSMUST00000166679,NM_008136,uc008cjo.1_5end
|description=CAGE_peak_2_at_Gnl1_5end
|id=chr17:36117059..36117078,+
|ontology_enrichment_celltype=CL:0002321!3.81e-15!70;CL:0000220!3.81e-15!70;CL:0000055!3.04e-11!50;CL:0000221!5.80e-11!44;CL:0000133!5.80e-11!44;CL:0002319!1.76e-10!43;CL:0000548!8.54e-10!115;CL:0000004!8.54e-10!115;CL:0000255!8.54e-10!115;CL:0002371!1.51e-08!118;CL:0000117!1.88e-08!23;CL:0000337!1.88e-08!23;CL:0000144!1.92e-08!121;CL:0000012!1.92e-08!121;CL:0000393!8.54e-08!39;CL:0000211!8.54e-08!39
|ontology_enrichment_celltype_v019_2=CL:0002321,3.76e-15,70;CL:0000221,5.65e-11,44;CL:0000133,5.65e-11,44;CL:0002319,1.72e-10,43;CL:0000117,1.81e-08,23;CL:0000337,1.81e-08,23;CL:0000393,8.44e-08,39;CL:0000211,8.44e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.31e-10!75;UBERON:0001016!2.31e-10!75;UBERON:0001017!2.45e-10!73;UBERON:0005743!2.45e-10!73;UBERON:0001049!1.26e-07!52;UBERON:0005068!1.26e-07!52;UBERON:0006241!1.26e-07!52;UBERON:0007135!1.26e-07!52;UBERON:0000955!1.37e-07!50;UBERON:0006238!1.37e-07!50;UBERON:0002616!1.38e-07!49;UBERON:0004121!4.29e-07!102;UBERON:0000924!4.29e-07!102;UBERON:0006601!4.29e-07!102;UBERON:0000033!4.78e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-10,75;UBERON:0001017,2.03e-10,73;UBERON:0000073,8.54e-09,54;UBERON:0001049,1.04e-07,52;UBERON:0005068,1.04e-07,52;UBERON:0006241,1.04e-07,52;UBERON:0007135,1.04e-07,52;UBERON:0004121,2.03e-07,95;UBERON:0000924,2.03e-07,95;UBERON:0006601,2.03e-07,95
|phase1_expression=7.36684696682052,8.72438519098403,5.91499011206397,5.14189159221611,10.0179145989269,3.52546471014969,1.86890112476421,0.387369970324729,6.75785866328,6.55380673701582,2.05461561870606,2.23362045186942,0.342401459862411,0.0874204024189974,0.666219523631325,1.41732687172878,0.699561878128147,0.788655413395594,0.548457734422955,0.42438965179803,3.06155844543851,2.18440092641948,0.783599367416806,3.51983330145495,2.06468352960453,5.16808767703518,6.8921919385452,4.52489588640367,4.75058548640935,4.28451220591882,4.8780712344167,1.90509202037889,4.92051830067656,0,3.75507105676657,1.66234645358492,2.04169356262369,0,1.5626706890476,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,2.89562681343828,4.66333883609767,5.50640256485045,12.5182615095686,7.84890562969608,9.22681967484782,6.61061656852564,8.39918529752175,10.062679505548,1.67782606057736,0.725362142011344,1.34437519656986,4.11615097657515,2.86533439938757,3.6097046459421,4.24864567805155,3.1739458756322,2.53532561402472,10.8430250262122,11.5608323494448,4.94944844504769,0,3.5524005747305,14.081205194365,25.3584081512226,4.35496371695606,5.13022565660425,4.83747411108179,6.56997264128748,4.19650227808066,3.1847607795888,4.31304619582064,2.75765635983006,12.1127469099328,6.38436690425939,7.68032666281217,3.16527090552465,5.21479568533735,5.73004707612436,8.93385596804419,12.9435400307286,8.55670187550137,2.65165726926301,3.27454865837937,3.54158947068071,2.65041676666144,2.49386148352392,1.73918693221007,0.860423876981386,2.03991400112325,2.69851595818909,0.649776417447669,2.68816132258401,1.40444420131752,6.64678258054425,7.79358013808606,9.18682893726885,6.4787973097273,5.13305909657271,10.1922095882658,14.2213340630666,3.89683873820185,4.30711771307668,4.54972000513305,2.51204535381932,0.517875767294343,2.52351636410202,4.8575891494518,1.52232739156071,2.7673859670727,1.50722640552623,1.88141931417128,3.01599819191221,13.1013332899218,1.15679485535929,0.884610551949874,1.94120219936891,2.42925670306433,1.45462575940567,0,2.34224637609238,1.04723353406728,1.53274233125155,1.67741174308288,1.79970819298022,1.27070227073065,3.44518470631092,2.28750301409313,2.89005009859588,3.12883776346098,2.30143911597297,2.70124457927428,2.59586020908412,3.36069900706044,1.99051152976149,2.27450482590307,0.210441855886474,3.3831315170303,5.0578462975364,2.34080768746954,2.41127708537144,2.78949646520444,1.66547836370305,3.09215691047105,1.03481348295606,5.6047678162539,3.9712276835242,2.28736461413134,3.94552318369635,1.94633074457919,0.696504333044333,1.02891068203972,3.18454826909589,0,1.28673953557358,1.70498099637356,2.27838349789052,3.28336483973535,2.70093092191522,2.84093682702252,1.96764231747404,1.85120535464854,2.55787339225449,4.82892122519315,2.45207218971056,2.46839774870221,1.80584210487005,1.54030738137126,1.90059983652932,1.09775057645525,0.671032093801859,2.10289948564127,2.46971069710283,2.97376904685418,2.3800550999719,4.47905326123991,2.55460339046482,1.9330119198314,2.01683524623343,1.33426826306922,1.33157938278791,3.32170343081158,2.47048432086016,3.01602250560323,2.98434708061726,3.31438948102504,1.79763881730844,0.432276099749388,1.1948476395262,3.03468641524931,2.39921876480431,2.25415471346161,2.44381593414377,1.93952487167626,2.10407459670956,1.83385957660346,1.91893192373483,2.511979645462,2.96153193412321,1.77871576252289,1.33476084572875,1.57247196090562,0.899448449539415,0.202860121388503,0.72353147925725,1.78238096246994,1.43848068725405,0.972811360650212,1.92192989231657,0,0.744281895337007,0.936113019343682,0.252578877947112,2.15276896226295,1.4473305640901,0.554259570499814,3.60033682363921,2.60743962307241,4.2436271443797,1.87752198630802,2.01007508930179,1.42826184531608,2.73187107000918,0.788175720530955,1.32878813789265,2.23236676120482,2.78567635016755,2.41758974612254,2.4590339958857,4.52373851817817,0.54390568381871,0,1.37968373152366,3.85321415970701,5.86058432961016,4.42624352517024,2.52470927204373,0.631016438832513,1.17131623288992,2.15423397732799,1.91175038362042,1.78238939265915,2.54768877709949,3.23848561339915,3.21481443702443,2.37172666767914,2.57057053137446,1.98716119291576,5.34196811001766,2.28041743095006,2.63952196756057,2.65490276679926,3.39892890616974,3.32555912661226,1.32023555829129,2.65771703592696,4.61152721915891,1.03371317267288,3.27180356529755,3.56497378384721,2.52829406348653,2.10837217149998,3.09406629744561,2.04263763452273,3.24109969256358,3.23396709456886,5.5727629108214,2.12808280370728,6.42127743367454,4.27827453565514,5.17590413494819,1.87737366450968,4.2366414172764,1.10264199027481,1.31909002353184,0.161464426695906,1.44751019827574,1.07435109602823,1.64140899745061,1.7488850197791,4.07935664423121,0.683483523191411,4.33412422722767,1.29636169158798,0.753473828018764,0.956859594047176,1.83022538565218,1.69978429993855,3.63873776041511,1.93479963326193,0,3.47969592939249,2.84647253977588,2.59212817972323,2.09088296014469,2.62035076495413,1.61837215661785,1.57041565878138,1.57053565190418,1.94422459937689,1.86401793926078,3.94585057078933,3.13984746692355,2.31641886639937,4.66682852025714,3.61647505737647,1.68956125490778,2.8165737274981,3.6457227756306,2.41176492179135,3.38217769156408,2.30424005006292,1.26404448251271,5.6763060281246,2.67048488628551,2.33857481360031,1.79026695667481,2.18549490259391,1.44234539423963,1.77227432609493,1.41353029927407,1.143102099825,0.705783295957884,0.487289403698762,1.05833025804362,0.701261413089414,1.58711268530648,8.87943813496259,8.52281637790019,5.20442310728643,2.31827512838629,1.12609485270709,2.38097111547445,1.92931541171159,2.00628841614145,1.6942555278512,1.38097570952153,2.86447756719698,2.40594455281163,2.05524755931193,0,1.35004500046361,2.2516060161211,3.62513927187364,3.10656187051092,4.98179268404048,0.399024873401031,2.04880326904961,1.21553358534147,0.628839487883947,2.02227859295016,0.666740183404846,1.03017528619447,0.320919209591815,1.26348605881899,0.25347929989024,2.07488975524684,2.80924522409647,2.36893063898016,1.66562859971278,0.952587382566147,2.20180219295225,3.47236596834669,2.06042950401653,1.76638704161277,1.37147700954166,1.24233064311536,3.09967046931517,1.0174249164263,1.78807822789128,1.60767754994185,1.64635175585495,1.05227884575137,1.90125759384206,4.48913817326191,2.72860541685601,1.97008964751127,2.86461730218783,3.40861050609125,1.54325288784913,1.99848462350357,1.40358965067245,2.79332370262788,1.53030665655075,1.54413993383661,1.39120701372253
|short_description=p2@Gnl1
}}

Revision as of 14:28, 13 September 2013

Short description:p2@Gnl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gnl1_5end
Coexpression cluster:NA
Association with transcript: 159bp_to_ENSMUST00000166679, NM_008136, uc008cjo.1_5end
EntrezGene:Gnl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gnl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C814.08
Mouse Microglia, donor2.CNhs12634.11736-123E825.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A813.10
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I84.98
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell3.76e-1570
ectodermal cell5.65e-1144
neurectodermal cell5.65e-1144
neural cell1.72e-1043
CNS neuron (sensu Vertebrata)1.81e-0823
neuroblast (sensu Vertebrata)1.81e-0823
electrically responsive cell8.44e-0839
electrically active cell8.44e-0839

Uber anatomy
Ontology termp-valuen
nervous system1.91e-1075
central nervous system2.03e-1073
regional part of nervous system8.54e-0954
neural tube1.04e-0752
neural rod1.04e-0752
future spinal cord1.04e-0752
neural keel1.04e-0752
ectoderm-derived structure2.03e-0795
ectoderm2.03e-0795
presumptive ectoderm2.03e-0795







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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