FFCP PHASE1:Mm9::chr17:71105425..71105430,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:71105425..71105430,+|id=chr17:71105425..71105430,+|ontology_enrichment_celltype=CL:0000068!1.55e-08!3;CL:0002202!1.55e-08!3;CL:0000069!1.55e-08!3;CL:0002632!1.55e-08!3;CL:0002368!1.55e-08!3;CL:0000307!1.55e-08!3;CL:0000377!1.55e-08!3;CL:0002250!7.61e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,4.90e-53,3;CL:0002202,4.90e-53,3;CL:0000069,4.90e-53,3;CL:0002632,4.90e-53,3;CL:0002368,4.90e-53,3;CL:0000307,4.90e-53,3;CL:0000377,4.90e-53,3;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000066,4.03e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!3.73e-11!24;UBERON:0003135!7.47e-11!15;UBERON:0000014!2.55e-10!5;UBERON:0001003!2.55e-10!5;UBERON:0002097!2.55e-10!5;UBERON:0002199!2.55e-10!5;UBERON:0007029!2.55e-10!5;UBERON:0007376!2.55e-10!5;UBERON:0002416!2.55e-10!5;UBERON:0007383!2.55e-10!5;UBERON:0005156!4.34e-10!26;UBERON:0000990!4.34e-10!26;UBERON:0003101!4.61e-10!16;UBERON:0000079!4.61e-10!16;UBERON:0000473!4.12e-09!14;UBERON:0003126!1.55e-08!3;UBERON:0001005!1.55e-08!3;UBERON:0007196!1.55e-08!3;UBERON:0001558!1.55e-08!3;UBERON:0004175!1.98e-08!9;UBERON:0001301!2.47e-07!3;UBERON:0006555!2.47e-07!3;UBERON:0005103!2.47e-07!3;UBERON:0000083!2.47e-07!3;UBERON:0009201!2.47e-07!3;UBERON:0004819!2.47e-07!3;UBERON:0006553!2.47e-07!3;UBERON:0003074!2.47e-07!3;UBERON:0003060!2.47e-07!3;UBERON:0004176!2.97e-07!17;UBERON:0009196!2.97e-07!17;UBERON:0009117!2.97e-07!17;UBERON:0000331!6.59e-07!3;UBERON:0002116!6.59e-07!3;UBERON:0001204!6.59e-07!3;UBERON:0001168!6.59e-07!3;UBERON:0000991!8.96e-07!18;UBERON:0005564!8.96e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.90e-53,3;UBERON:0001005,4.90e-53,3;UBERON:0007196,4.90e-53,3;UBERON:0001558,4.90e-53,3;UBERON:0005178,4.01e-10,17;UBERON:0005181,4.01e-10,17;UBERON:0002224,4.01e-10,17;UBERON:0000915,4.01e-10,17;UBERON:0008947,4.01e-10,17;UBERON:0003258,4.01e-10,17;UBERON:0003103,3.65e-07,43;UBERON:0001301,4.77e-07,3;UBERON:0006555,4.77e-07,3;UBERON:0005103,4.77e-07,3;UBERON:0000083,4.77e-07,3;UBERON:0009201,4.77e-07,3;UBERON:0004819,4.77e-07,3;UBERON:0006553,4.77e-07,3;UBERON:0003074,4.77e-07,3;UBERON:0003060,4.77e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52560580449342,10.6411143499541,10.6160133453104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.974820435595601,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.422190474497091,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0,0,0.258319646955462,0.844780627453891,0.469428954583016,1.0416350787516,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr17:71105425..71105430,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:71105425..71105430,+ | |||
|id=chr17:71105425..71105430,+ | |||
|ontology_enrichment_celltype=CL:0000068!1.55e-08!3;CL:0002202!1.55e-08!3;CL:0000069!1.55e-08!3;CL:0002632!1.55e-08!3;CL:0002368!1.55e-08!3;CL:0000307!1.55e-08!3;CL:0000377!1.55e-08!3;CL:0002250!7.61e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.90e-53,3;CL:0002202,4.90e-53,3;CL:0000069,4.90e-53,3;CL:0002632,4.90e-53,3;CL:0002368,4.90e-53,3;CL:0000307,4.90e-53,3;CL:0000377,4.90e-53,3;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000066,4.03e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!3.73e-11!24;UBERON:0003135!7.47e-11!15;UBERON:0000014!2.55e-10!5;UBERON:0001003!2.55e-10!5;UBERON:0002097!2.55e-10!5;UBERON:0002199!2.55e-10!5;UBERON:0007029!2.55e-10!5;UBERON:0007376!2.55e-10!5;UBERON:0002416!2.55e-10!5;UBERON:0007383!2.55e-10!5;UBERON:0005156!4.34e-10!26;UBERON:0000990!4.34e-10!26;UBERON:0003101!4.61e-10!16;UBERON:0000079!4.61e-10!16;UBERON:0000473!4.12e-09!14;UBERON:0003126!1.55e-08!3;UBERON:0001005!1.55e-08!3;UBERON:0007196!1.55e-08!3;UBERON:0001558!1.55e-08!3;UBERON:0004175!1.98e-08!9;UBERON:0001301!2.47e-07!3;UBERON:0006555!2.47e-07!3;UBERON:0005103!2.47e-07!3;UBERON:0000083!2.47e-07!3;UBERON:0009201!2.47e-07!3;UBERON:0004819!2.47e-07!3;UBERON:0006553!2.47e-07!3;UBERON:0003074!2.47e-07!3;UBERON:0003060!2.47e-07!3;UBERON:0004176!2.97e-07!17;UBERON:0009196!2.97e-07!17;UBERON:0009117!2.97e-07!17;UBERON:0000331!6.59e-07!3;UBERON:0002116!6.59e-07!3;UBERON:0001204!6.59e-07!3;UBERON:0001168!6.59e-07!3;UBERON:0000991!8.96e-07!18;UBERON:0005564!8.96e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.90e-53,3;UBERON:0001005,4.90e-53,3;UBERON:0007196,4.90e-53,3;UBERON:0001558,4.90e-53,3;UBERON:0005178,4.01e-10,17;UBERON:0005181,4.01e-10,17;UBERON:0002224,4.01e-10,17;UBERON:0000915,4.01e-10,17;UBERON:0008947,4.01e-10,17;UBERON:0003258,4.01e-10,17;UBERON:0003103,3.65e-07,43;UBERON:0001301,4.77e-07,3;UBERON:0006555,4.77e-07,3;UBERON:0005103,4.77e-07,3;UBERON:0000083,4.77e-07,3;UBERON:0009201,4.77e-07,3;UBERON:0004819,4.77e-07,3;UBERON:0006553,4.77e-07,3;UBERON:0003074,4.77e-07,3;UBERON:0003060,4.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52560580449342,10.6411143499541,10.6160133453104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0.974820435595601,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.422190474497091,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0,0,0.258319646955462,0.844780627453891,0.469428954583016,1.0416350787516,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:71105425..71105430,+ | |||
}} |
Revision as of 15:13, 13 September 2013
Short description: | p@chr17:71105425..71105430, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:71105425..71105430, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.90e-53 | 3 |
epithelial cell of tracheobronchial tree | 4.90e-53 | 3 |
branched duct epithelial cell | 4.90e-53 | 3 |
epithelial cell of lower respiratory tract | 4.90e-53 | 3 |
respiratory epithelial cell | 4.90e-53 | 3 |
tracheal epithelial cell | 4.90e-53 | 3 |
tracheoblast | 4.90e-53 | 3 |
endo-epithelial cell | 2.29e-11 | 15 |
endodermal cell | 1.01e-08 | 20 |
epithelial cell | 4.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.90e-53 | 3 |
respiratory airway | 4.90e-53 | 3 |
tracheobronchial tree | 4.90e-53 | 3 |
lower respiratory tract | 4.90e-53 | 3 |
thoracic cavity element | 4.01e-10 | 17 |
thoracic segment organ | 4.01e-10 | 17 |
thoracic cavity | 4.01e-10 | 17 |
thoracic segment of trunk | 4.01e-10 | 17 |
respiratory primordium | 4.01e-10 | 17 |
endoderm of foregut | 4.01e-10 | 17 |
compound organ | 3.65e-07 | 43 |
epididymis | 4.77e-07 | 3 |
excretory tube | 4.77e-07 | 3 |
mesonephric epithelium | 4.77e-07 | 3 |
mesonephric tubule | 4.77e-07 | 3 |
nephric duct | 4.77e-07 | 3 |
kidney epithelium | 4.77e-07 | 3 |
renal duct | 4.77e-07 | 3 |
mesonephric duct | 4.77e-07 | 3 |
pronephric duct | 4.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.