FFCP PHASE1:Hg19::chr5:32712363..32712425,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4883|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7945|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_ENST00000507141_5end|coexpression_cluster_id=C3895|description=CAGE_peak_7_at_NPR3_5end|id=chr5:32712363..32712425,+|ontology_enrichment_celltype=CL:0000055!1.68e-22!180;CL:0000057!3.65e-15!75;CL:0000680!1.02e-11!57;CL:0000056!1.02e-11!57;CL:0000355!1.02e-11!57;CL:0000187!5.50e-10!54;CL:0002620!1.36e-09!23;CL:0000136!2.03e-09!15;CL:0000192!1.31e-08!42;CL:0000514!1.31e-08!42;CL:0000393!1.96e-08!60;CL:0000211!1.96e-08!60;CL:0000183!3.11e-08!59;CL:0002334!1.93e-07!12|ontology_enrichment_celltype_v019=CL:0000136;1.15e-11;13!CL:0002620;9.19e-10;23|ontology_enrichment_celltype_v019_2=CL:0000057,1.73e-11,76;CL:0000136,9.80e-10,15;CL:0002620,1.09e-09,23;CL:0000680,8.01e-08,58;CL:0000056,8.01e-08,58;CL:0000355,8.01e-08,58;CL:0000034,3.26e-07,441;CL:0000048,7.09e-07,427|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.16e-12!83;UBERON:0002329!1.16e-12!83;UBERON:0003077!1.16e-12!83;UBERON:0003059!1.16e-12!83;UBERON:0007282!1.16e-12!83;UBERON:0009618!1.16e-12!83;UBERON:0007285!1.16e-12!83;UBERON:0001134!3.63e-12!61;UBERON:0002036!3.63e-12!61;UBERON:0003082!3.63e-12!61;UBERON:0002385!5.17e-12!63;UBERON:0001015!5.17e-12!63;UBERON:0000383!5.17e-12!63;UBERON:0004290!2.13e-11!70;UBERON:0000475!5.93e-10!365;UBERON:0000486!2.53e-09!82;UBERON:0004573!2.16e-07!33;UBERON:0004571!2.16e-07!33;UBERON:0005256!2.24e-07!143;UBERON:0002100!3.89e-07!216|ontology_enrichment_uberon_v019=UBERON:0004905;5.26e-11;8!UBERON:0000982;5.26e-11;8!UBERON:0004770;5.26e-11;8!UBERON:0004457;5.92e-10;9!UBERON:0000042;5.92e-10;9!UBERON:0011135;1.72e-09;5!UBERON:0002216;1.72e-09;5!UBERON:0011134;1.72e-09;5!UBERON:0002209;1.72e-09;5!UBERON:0002213;1.72e-09;5!UBERON:0007844;1.72e-09;5!UBERON:0011138;1.72e-09;5!UBERON:0001130;1.72e-09;5!UBERON:0001066;1.72e-09;5!UBERON:0001468;1.72e-09;5!UBERON:0003688;3.64e-08;6!UBERON:0002358;3.64e-08;6!UBERON:0003684;3.64e-08;6!UBERON:0001178;3.64e-08;6!UBERON:0004573;6.20e-07;33!UBERON:0004571;6.20e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0004905,7.73e-11,8;UBERON:0000982,7.73e-11,8;UBERON:0004770,7.73e-11,8;UBERON:0011135,2.58e-09,5;UBERON:0002216,2.58e-09,5;UBERON:0011134,2.58e-09,5;UBERON:0002209,2.58e-09,5;UBERON:0002213,2.58e-09,5;UBERON:0005856,2.58e-09,5;UBERON:0005866,2.58e-09,5;UBERON:0005863,2.58e-09,5;UBERON:0007844,2.58e-09,5;UBERON:0011138,2.58e-09,5;UBERON:0001130,2.58e-09,5;UBERON:0001066,2.58e-09,5;UBERON:0001468,2.58e-09,5;UBERON:0001134,6.15e-09,62;UBERON:0002036,6.15e-09,62;UBERON:0003082,6.15e-09,62;UBERON:0002385,1.79e-08,64;UBERON:0001015,1.79e-08,64;UBERON:0000383,1.79e-08,64;UBERON:0003688,4.62e-08,6;UBERON:0002358,4.62e-08,6;UBERON:0003684,4.62e-08,6;UBERON:0001178,4.62e-08,6;UBERON:0004573,6.61e-08,33;UBERON:0004571,6.61e-08,33;UBERON:0007524,1.59e-07,73;UBERON:0002329,4.48e-07,71;UBERON:0003059,4.48e-07,71;UBERON:0007282,4.48e-07,71;UBERON:0004290,4.48e-07,71;UBERON:0009618,4.48e-07,71;UBERON:0004457,4.82e-07,12;UBERON:0000042,4.82e-07,12;UBERON:0002097,6.44e-07,41;UBERON:0003077,6.70e-07,72;UBERON:0007285,6.70e-07,72|phase1_expression=9.44727572206894,7.06531728840244,6.20199378022273,2.00146596706261,5.81049422755474,12.2127393374052,0,0.631719873426831,0,0,0,0,0,4.33182235360163,3.31397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,2.1686349143074,5.51471701699479,3.18662341713812,0.795285947051099,0.973269740605272,0,0.443458794925128,0.43917392846563,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,3.41902381494365,0.926864265692532,4.58938593198102,1.77334191099179,1.12135520028461,0,0.49333509683432,0,0,0,0.605429710579726,0.576175924479999,0,0.936480230490962,0,0.448346041655403,0.117434498643765,0.161872944368132,0,0.816616685019573,0,0.929932030581889,1.18800285728205,0.494533858557114,0.910161361938026,0,0.168336113954066,0,0,0,4.59731693698529,2.10333282469236,0,1.25572744982203,0.427114777637135,4.02670612203168,2.10063767259082,3.91599611106068,1.28820270022815,1.67505170698431,3.37552664482532,3.50773218580315,0.757301322732344,2.94559675655358,4.68773564774555,1.42003837006646,2.11579406278045,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0,0,6.96551892047969,2.88751792667834,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1121310843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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7945 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000507141_5end | |||
|coexpression_cluster_id=C3895 | |||
|description=CAGE_peak_7_at_NPR3_5end | |||
|id=chr5:32712363..32712425,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.68e-22!180;CL:0000057!3.65e-15!75;CL:0000680!1.02e-11!57;CL:0000056!1.02e-11!57;CL:0000355!1.02e-11!57;CL:0000187!5.50e-10!54;CL:0002620!1.36e-09!23;CL:0000136!2.03e-09!15;CL:0000192!1.31e-08!42;CL:0000514!1.31e-08!42;CL:0000393!1.96e-08!60;CL:0000211!1.96e-08!60;CL:0000183!3.11e-08!59;CL:0002334!1.93e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.15e-11;13!CL:0002620;9.19e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.73e-11,76;CL:0000136,9.80e-10,15;CL:0002620,1.09e-09,23;CL:0000680,8.01e-08,58;CL:0000056,8.01e-08,58;CL:0000355,8.01e-08,58;CL:0000034,3.26e-07,441;CL:0000048,7.09e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.16e-12!83;UBERON:0002329!1.16e-12!83;UBERON:0003077!1.16e-12!83;UBERON:0003059!1.16e-12!83;UBERON:0007282!1.16e-12!83;UBERON:0009618!1.16e-12!83;UBERON:0007285!1.16e-12!83;UBERON:0001134!3.63e-12!61;UBERON:0002036!3.63e-12!61;UBERON:0003082!3.63e-12!61;UBERON:0002385!5.17e-12!63;UBERON:0001015!5.17e-12!63;UBERON:0000383!5.17e-12!63;UBERON:0004290!2.13e-11!70;UBERON:0000475!5.93e-10!365;UBERON:0000486!2.53e-09!82;UBERON:0004573!2.16e-07!33;UBERON:0004571!2.16e-07!33;UBERON:0005256!2.24e-07!143;UBERON:0002100!3.89e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.26e-11;8!UBERON:0000982;5.26e-11;8!UBERON:0004770;5.26e-11;8!UBERON:0004457;5.92e-10;9!UBERON:0000042;5.92e-10;9!UBERON:0011135;1.72e-09;5!UBERON:0002216;1.72e-09;5!UBERON:0011134;1.72e-09;5!UBERON:0002209;1.72e-09;5!UBERON:0002213;1.72e-09;5!UBERON:0007844;1.72e-09;5!UBERON:0011138;1.72e-09;5!UBERON:0001130;1.72e-09;5!UBERON:0001066;1.72e-09;5!UBERON:0001468;1.72e-09;5!UBERON:0003688;3.64e-08;6!UBERON:0002358;3.64e-08;6!UBERON:0003684;3.64e-08;6!UBERON:0001178;3.64e-08;6!UBERON:0004573;6.20e-07;33!UBERON:0004571;6.20e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,7.73e-11,8;UBERON:0000982,7.73e-11,8;UBERON:0004770,7.73e-11,8;UBERON:0011135,2.58e-09,5;UBERON:0002216,2.58e-09,5;UBERON:0011134,2.58e-09,5;UBERON:0002209,2.58e-09,5;UBERON:0002213,2.58e-09,5;UBERON:0005856,2.58e-09,5;UBERON:0005866,2.58e-09,5;UBERON:0005863,2.58e-09,5;UBERON:0007844,2.58e-09,5;UBERON:0011138,2.58e-09,5;UBERON:0001130,2.58e-09,5;UBERON:0001066,2.58e-09,5;UBERON:0001468,2.58e-09,5;UBERON:0001134,6.15e-09,62;UBERON:0002036,6.15e-09,62;UBERON:0003082,6.15e-09,62;UBERON:0002385,1.79e-08,64;UBERON:0001015,1.79e-08,64;UBERON:0000383,1.79e-08,64;UBERON:0003688,4.62e-08,6;UBERON:0002358,4.62e-08,6;UBERON:0003684,4.62e-08,6;UBERON:0001178,4.62e-08,6;UBERON:0004573,6.61e-08,33;UBERON:0004571,6.61e-08,33;UBERON:0007524,1.59e-07,73;UBERON:0002329,4.48e-07,71;UBERON:0003059,4.48e-07,71;UBERON:0007282,4.48e-07,71;UBERON:0004290,4.48e-07,71;UBERON:0009618,4.48e-07,71;UBERON:0004457,4.82e-07,12;UBERON:0000042,4.82e-07,12;UBERON:0002097,6.44e-07,41;UBERON:0003077,6.70e-07,72;UBERON:0007285,6.70e-07,72 | |||
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| |||
|short_description=p7@NPR3 | |||
}} |
Revision as of 15:26, 13 September 2013
Short description: | p7@NPR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_NPR3_5end |
Coexpression cluster: | C3895_mature_Preadipocyte_extraskeletal_Fibroblast_adipose_Adipocyte_Olfactory |
Association with transcript: | -11bp_to_ENST00000507141_5end |
EntrezGene: | NPR3 |
HGNC: | 7945 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.73e-11 | 76 |
fat cell | 9.80e-10 | 15 |
skin fibroblast | 1.09e-09 | 23 |
muscle precursor cell | 8.01e-08 | 58 |
myoblast | 8.01e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.01e-08 | 58 |
stem cell | 3.26e-07 | 441 |
multi fate stem cell | 7.09e-07 | 427 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.