FFCP PHASE1:Hg19::chr6:107077316..107077345,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84816|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18647|TSSclassifier=S|UniProt=Q8WWV3|association_with_transcript=16bp_to_ENST00000369063_5end|description=CAGE_peak_2_at_RTN4IP1_5end|id=chr6:107077316..107077345,-|ontology_enrichment_celltype=CL:0000945!2.42e-08!24;CL:0000826!2.42e-08!24;CL:0000236!3.99e-07!14;CL:0000542!4.32e-07!53;CL:0000051!4.32e-07!53|ontology_enrichment_celltype_v019=CL:0000945;2.35e-10;24!CL:0000236;2.67e-08;13|ontology_enrichment_celltype_v019_2=CL:0000945,8.27e-11,24;CL:0000826,8.27e-11,24;CL:0000236,7.36e-09,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!2.37e-18!235;DOID:14566!3.24e-17!239;DOID:2531!1.94e-13!51;DOID:0060083!1.94e-13!51;DOID:1240!4.71e-12!39;DOID:0050686!1.04e-10!137;DOID:8692!7.46e-10!31;DOID:0050687!1.65e-09!143;DOID:305!3.46e-09!106|ontology_enrichment_disease_v019=DOID:8692;1.02e-11;31!DOID:1240;1.62e-11;39!DOID:2531;1.41e-09;51!DOID:0060083;1.41e-09;51|ontology_enrichment_disease_v019_2=DOID:162,3.62e-16,235;DOID:2531,2.94e-15,51;DOID:0060083,2.94e-15,51;DOID:14566,5.24e-15,239;DOID:1240,8.90e-14,39;DOID:8692,5.87e-12,31;DOID:0050686,4.48e-10,137;DOID:305,7.54e-08,106;DOID:0050687,4.34e-07,143|ontology_enrichment_uberon=UBERON:0000073!5.77e-09!94;UBERON:0001016!5.77e-09!94;UBERON:0001017!1.88e-08!82;UBERON:0005743!3.30e-08!86;UBERON:0002780!2.96e-07!41;UBERON:0001890!2.96e-07!41;UBERON:0006240!2.96e-07!41;UBERON:0002020!6.54e-07!34;UBERON:0003528!6.54e-07!34|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.17e-08,89;UBERON:0001017,3.51e-08,81;UBERON:0003528,6.01e-07,34;UBERON:0002020,6.01e-07,34;UBERON:0002780,9.01e-07,41;UBERON:0001890,9.01e-07,41;UBERON:0003080,9.01e-07,41;UBERON:0006240,9.01e-07,41;UBERON:0011216,9.06e-07,223|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0.737201809504527,0,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0.246242116153576,0.204000691244253,0,2.28988789704845,2.32686522623903,2.00868223351684,1.60468152070698,1.31360943119913,1.33808328233255,0.393364276848904,0.767658796194425,0,0,0.30120591877825,0,7.90165445919077,2.98555388223585,2.34880351467878,0,0.401088894940283,0.651032612147555,1.56740831967947,1.29557466407592,2.57575567634187,0,0,0.485168122375632,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.674170453335254,0,0,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0,0.622822248995575,0,0,1.08594422352558,0,0,0.316462387440884,0.633765858935825,0.425208599930087,0.838634582033504,0.786300418025466,0.150176892841506,0.64290234678832,1.14005097496499,0.79566670879636,0.730656615058536,1.75996244461323,6.55366333514558,2.66852776159066,5.9742231159311,4.80475184443215,4.02326707968138,9.25462821898807,7.63243003628291,1.70763890732835,1.76171156811282,0.382273228125229,1.32171328579026,0.560508562981536,1.58030450865046,0.983548850569165,0.393010762749165,1.02800749499755,1.83905144929746,1.30368906653436,0.946895611469467,1.94826728407911,1.44833593950726,0.883817722424512,1.10766947291811,1.89562704635511,0.768547918354051,0.650296737799391,0.822189523018381,0,0.579606171470105,0.889719378972363,1.60524496853828,1.04535523804977,1.13309342697566,0.766440987203842,0.68725489096526,0.506039384039006,0.318565414324097,0,0.950452044448374,0.903450714466637,0.383959833463255,3.74792179657038,0.947109008176067,1.64225599384209,0.604820229674197,0.267440195783507,0.868946423296794,0,0,0.639312809217652,1.0843174571537,0,0.434539556882471,0.795285947051099,0,1.03988298880475,1.10864698731282,1.05401742831751,1.24430121722827,0.364295288292542,2.59549109949101,0.649094787309367,1.0447784237956,0.26591592103773,1.19245312152671,3.43196946468077,0.371457501329565,0.39752481473341,0,0,0,0,0,1.04497483268405,1.29208379584664,1.06729878806013,0.66944122552934,0,0,0,0.367663080345869,0,1.87529429396568,0.22452937262617,1.12611480483322,0,0,0.549605231791222,0,0,0.436094052142534,0.993943903390637,0.506522046658319,0.132409180813219,0,1.06400514659507,0.560677600142307,0,0.74000264525148,0.933633106199299,0.538842688278752,0.980771418680752,0.454072282934794,0.576175924479999,0,0.312160076830321,1.1409436430889,0.149448680551801,0.23486899728753,0.323745888736263,0.98315564691574,0.408308342509787,1.35117749042945,0.309977343527296,0,0.247266929278557,0,0,1.17835279767846,1.25118519871964,0.277064115484183,0.438977620880838,0.30648779579902,1.05166641234618,1.36118619792025,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.18611685633159,0.506328996723799,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.67824236924195,0.966304265816484,0,0.860413786167011,5.3668430697022,4.77107165957347,4.29917588617218,2.17688215532278,2.27088765788066,5.839637745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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18647 | |||
|TSSclassifier=S | |||
|UniProt=Q8WWV3 | |||
|association_with_transcript=16bp_to_ENST00000369063_5end | |||
|description=CAGE_peak_2_at_RTN4IP1_5end | |||
|id=chr6:107077316..107077345,- | |||
|ontology_enrichment_celltype=CL:0000945!2.42e-08!24;CL:0000826!2.42e-08!24;CL:0000236!3.99e-07!14;CL:0000542!4.32e-07!53;CL:0000051!4.32e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.35e-10;24!CL:0000236;2.67e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.27e-11,24;CL:0000826,8.27e-11,24;CL:0000236,7.36e-09,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.37e-18!235;DOID:14566!3.24e-17!239;DOID:2531!1.94e-13!51;DOID:0060083!1.94e-13!51;DOID:1240!4.71e-12!39;DOID:0050686!1.04e-10!137;DOID:8692!7.46e-10!31;DOID:0050687!1.65e-09!143;DOID:305!3.46e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.02e-11;31!DOID:1240;1.62e-11;39!DOID:2531;1.41e-09;51!DOID:0060083;1.41e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.62e-16,235;DOID:2531,2.94e-15,51;DOID:0060083,2.94e-15,51;DOID:14566,5.24e-15,239;DOID:1240,8.90e-14,39;DOID:8692,5.87e-12,31;DOID:0050686,4.48e-10,137;DOID:305,7.54e-08,106;DOID:0050687,4.34e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.77e-09!94;UBERON:0001016!5.77e-09!94;UBERON:0001017!1.88e-08!82;UBERON:0005743!3.30e-08!86;UBERON:0002780!2.96e-07!41;UBERON:0001890!2.96e-07!41;UBERON:0006240!2.96e-07!41;UBERON:0002020!6.54e-07!34;UBERON:0003528!6.54e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.17e-08,89;UBERON:0001017,3.51e-08,81;UBERON:0003528,6.01e-07,34;UBERON:0002020,6.01e-07,34;UBERON:0002780,9.01e-07,41;UBERON:0001890,9.01e-07,41;UBERON:0003080,9.01e-07,41;UBERON:0006240,9.01e-07,41;UBERON:0011216,9.06e-07,223 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0.737201809504527,0,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0.246242116153576,0.204000691244253,0,2.28988789704845,2.32686522623903,2.00868223351684,1.60468152070698,1.31360943119913,1.33808328233255,0.393364276848904,0.767658796194425,0,0,0.30120591877825,0,7.90165445919077,2.98555388223585,2.34880351467878,0,0.401088894940283,0.651032612147555,1.56740831967947,1.29557466407592,2.57575567634187,0,0,0.485168122375632,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.674170453335254,0,0,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0,0.622822248995575,0,0,1.08594422352558,0,0,0.316462387440884,0.633765858935825,0.425208599930087,0.838634582033504,0.786300418025466,0.150176892841506,0.64290234678832,1.14005097496499,0.79566670879636,0.730656615058536,1.75996244461323,6.55366333514558,2.66852776159066,5.9742231159311,4.80475184443215,4.02326707968138,9.25462821898807,7.63243003628291,1.70763890732835,1.76171156811282,0.382273228125229,1.32171328579026,0.560508562981536,1.58030450865046,0.983548850569165,0.393010762749165,1.02800749499755,1.83905144929746,1.30368906653436,0.946895611469467,1.94826728407911,1.44833593950726,0.883817722424512,1.10766947291811,1.89562704635511,0.768547918354051,0.650296737799391,0.822189523018381,0,0.579606171470105,0.889719378972363,1.60524496853828,1.04535523804977,1.13309342697566,0.766440987203842,0.68725489096526,0.506039384039006,0.318565414324097,0,0.950452044448374,0.903450714466637,0.383959833463255,3.74792179657038,0.947109008176067,1.64225599384209,0.604820229674197,0.267440195783507,0.868946423296794,0,0,0.639312809217652,1.0843174571537,0,0.434539556882471,0.795285947051099,0,1.03988298880475,1.10864698731282,1.05401742831751,1.24430121722827,0.364295288292542,2.59549109949101,0.649094787309367,1.0447784237956,0.26591592103773,1.19245312152671,3.43196946468077,0.371457501329565,0.39752481473341,0,0,0,0,0,1.04497483268405,1.29208379584664,1.06729878806013,0.66944122552934,0,0,0,0.367663080345869,0,1.87529429396568,0.22452937262617,1.12611480483322,0,0,0.549605231791222,0,0,0.436094052142534,0.993943903390637,0.506522046658319,0.132409180813219,0,1.06400514659507,0.560677600142307,0,0.74000264525148,0.933633106199299,0.538842688278752,0.980771418680752,0.454072282934794,0.576175924479999,0,0.312160076830321,1.1409436430889,0.149448680551801,0.23486899728753,0.323745888736263,0.98315564691574,0.408308342509787,1.35117749042945,0.309977343527296,0,0.247266929278557,0,0,1.17835279767846,1.25118519871964,0.277064115484183,0.438977620880838,0.30648779579902,1.05166641234618,1.36118619792025,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.18611685633159,0.506328996723799,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.67824236924195,0.966304265816484,0,0.860413786167011,5.3668430697022,4.77107165957347,4.29917588617218,2.17688215532278,2.27088765788066,5.83963774521328,0,0,0,0.464367928031979,0,2.83936320095625,1.18009283054671,1.68707720918437,1.98529150918309,1.30727666455444,1.66089433377768,1.34831308160164,1.17732879075208,0.38474715694639,0.738155454624648,0,0,0,0,0,0.590789906681404,1.7658523976586,2.58275720940538,0.686271241194102,0.548751427043128,1.1240175325762,0.603173834469785,0.925884451585296,0.325808305310325,0,0,0.695582429850461,0.352226082707465,1.29929802984966,0,1.52203321787679,0.790204397959275,0.858486162094873,1.23108503043699,1.17002132569619,0.891786973732369,0.93733833986777,0.16798212819886,0.708875486211932,0.626909658919938,0.290633938513962,0.766765358330422,0.985326475791887,0.44024217006613,0,0.288239906833923,0,1.14296209725904,0.763976851116555,0,1.71072446022705,0.822619941626588,0.300343057843917,0.571652865261156,0.112131084345361,0,1.39342743059805,0.646358578788889,0,0.845302752556,0.531876233169741,0,0.514414748524284,0,1.0656887160644,0.285955987316295,0,0.823240336780769,0.977208552881205,1.06617584622764,0.791951872933429,0.602878754119172,0.871533458600294,0.299918973546171,1.2162378064119,1.00451418286425,0,0.479249710983165,0,0,0.723906533337896,1.02738161275192,0.716243852959582,1.34502172792233,0.788123040807709,0.431255149719035,0.513372145118994,1.01637849688985,1.30139853857622,2.31986643833309,0.502548796003046,1.91381625495949,0,0,0,0.49076596687656,1.50051156317903,0.542530047399471,0.207970861530807,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,1.10621501125022,0.868836144680828,0,0.343143423810856,0.82707210449155,0.431428401637234,0.640365346820666,0.606255142892519,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0.321707842287215,0,1.07946785661859,0.887808626565635,0.574890092096664,0.519254429183621,0.929683027679674,1.81289174387433,0.401012940606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| |||
|short_description=p2@RTN4IP1 | |||
}} |
Revision as of 17:14, 13 September 2013
Short description: | p2@RTN4IP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RTN4IP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000369063_5end |
EntrezGene: | RTN4IP1 |
HGNC: | 18647 |
UniProt: | Q8WWV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.27e-11 | 24 |
pro-B cell | 8.27e-11 | 24 |
B cell | 7.36e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.17e-08 | 89 |
central nervous system | 3.51e-08 | 81 |
brain grey matter | 6.01e-07 | 34 |
gray matter | 6.01e-07 | 34 |
regional part of forebrain | 9.01e-07 | 41 |
forebrain | 9.01e-07 | 41 |
anterior neural tube | 9.01e-07 | 41 |
future forebrain | 9.01e-07 | 41 |
organ system subdivision | 9.06e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.62e-16 | 235 |
hematologic cancer | 2.94e-15 | 51 |
immune system cancer | 2.94e-15 | 51 |
disease of cellular proliferation | 5.24e-15 | 239 |
leukemia | 8.90e-14 | 39 |
myeloid leukemia | 5.87e-12 | 31 |
organ system cancer | 4.48e-10 | 137 |
carcinoma | 7.54e-08 | 106 |
cell type cancer | 4.34e-07 | 143 |
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