FFCP PHASE1:Mm9::chr1:130602006..130602019,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:130602006..130602019,+|id=chr1:130602006..130602019,+|ontology_enrichment_celltype=CL:0000988!3.15e-19!32;CL:0002032!3.15e-19!32;CL:0000037!3.15e-19!32;CL:0000566!3.15e-19!32;CL:0000837!3.15e-19!32;CL:0000049!2.65e-13!19;CL:0002320!6.90e-12!46;CL:0000134!6.90e-12!46;CL:0002031!1.69e-11!25;CL:0000219!1.50e-10!54;CL:0000763!5.88e-09!16;CL:0000624!6.09e-09!8;CL:0000553!6.99e-09!6;CL:0000556!6.99e-09!6;CL:0000791!7.39e-08!9;CL:0000789!7.39e-08!9;CL:0002420!7.39e-08!9;CL:0002419!7.39e-08!9;CL:0000790!7.39e-08!9;CL:0000838!8.49e-08!12;CL:0000034!1.03e-07!97;CL:0000542!4.15e-07!13;CL:0000051!4.15e-07!13;CL:0000063!6.82e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,7.61e-13,32;CL:0002032,7.61e-13,32;CL:0000037,7.61e-13,32;CL:0000837,7.61e-13,32;CL:0002031,7.50e-11,25;CL:0000838,1.60e-09,12;CL:0000624,2.35e-09,8;CL:0000542,8.87e-09,13;CL:0000051,8.87e-09,13;CL:0000034,1.55e-08,97;CL:0002320,1.69e-08,46;CL:0000134,1.69e-08,46;CL:0000791,2.47e-08,9;CL:0000789,2.47e-08,9;CL:0002420,2.47e-08,9;CL:0002419,2.47e-08,9;CL:0000790,2.47e-08,9;CL:0000553,1.84e-07,6;CL:0000556,1.84e-07,6;CL:0000219,5.03e-07,54;CL:0000084,7.65e-07,11;CL:0000827,7.65e-07,11|ontology_enrichment_disease=DOID:0060100!3.22e-07!3;DOID:4045!3.22e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.14e-07,3;DOID:4045,3.14e-07,3|ontology_enrichment_uberon=UBERON:0002384!6.90e-12!46;UBERON:0002193!1.64e-10!48;UBERON:0002371!5.88e-09!16;UBERON:0002390!1.12e-07!45;UBERON:0003061!1.12e-07!45;UBERON:0002204!6.71e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.69e-08,46|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,3.66050677594334,2.80877431586392,0,0,0.342401459862411,0.174840804837995,0,0.607425802169478,0.699561878128147,3.15462165358238,2.05671650408608,2.97072756258621,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,3.1253413780952,0.523523743973798,26.4704169613956,15.7100461540443,7.76816564849846,0,0,0,0,0,0,0,0,0,7.21465206048266,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,1.79970819298022,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,13.9382312594961,9.37674730568509,9.53579819250524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:130602006..130602019,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:130602006..130602019,+ | |||
|id=chr1:130602006..130602019,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.15e-19!32;CL:0002032!3.15e-19!32;CL:0000037!3.15e-19!32;CL:0000566!3.15e-19!32;CL:0000837!3.15e-19!32;CL:0000049!2.65e-13!19;CL:0002320!6.90e-12!46;CL:0000134!6.90e-12!46;CL:0002031!1.69e-11!25;CL:0000219!1.50e-10!54;CL:0000763!5.88e-09!16;CL:0000624!6.09e-09!8;CL:0000553!6.99e-09!6;CL:0000556!6.99e-09!6;CL:0000791!7.39e-08!9;CL:0000789!7.39e-08!9;CL:0002420!7.39e-08!9;CL:0002419!7.39e-08!9;CL:0000790!7.39e-08!9;CL:0000838!8.49e-08!12;CL:0000034!1.03e-07!97;CL:0000542!4.15e-07!13;CL:0000051!4.15e-07!13;CL:0000063!6.82e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.61e-13,32;CL:0002032,7.61e-13,32;CL:0000037,7.61e-13,32;CL:0000837,7.61e-13,32;CL:0002031,7.50e-11,25;CL:0000838,1.60e-09,12;CL:0000624,2.35e-09,8;CL:0000542,8.87e-09,13;CL:0000051,8.87e-09,13;CL:0000034,1.55e-08,97;CL:0002320,1.69e-08,46;CL:0000134,1.69e-08,46;CL:0000791,2.47e-08,9;CL:0000789,2.47e-08,9;CL:0002420,2.47e-08,9;CL:0002419,2.47e-08,9;CL:0000790,2.47e-08,9;CL:0000553,1.84e-07,6;CL:0000556,1.84e-07,6;CL:0000219,5.03e-07,54;CL:0000084,7.65e-07,11;CL:0000827,7.65e-07,11 | |||
|ontology_enrichment_disease=DOID:0060100!3.22e-07!3;DOID:4045!3.22e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.14e-07,3;DOID:4045,3.14e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.90e-12!46;UBERON:0002193!1.64e-10!48;UBERON:0002371!5.88e-09!16;UBERON:0002390!1.12e-07!45;UBERON:0003061!1.12e-07!45;UBERON:0002204!6.71e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.69e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,3.66050677594334,2.80877431586392,0,0,0.342401459862411,0.174840804837995,0,0.607425802169478,0.699561878128147,3.15462165358238,2.05671650408608,2.97072756258621,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,3.1253413780952,0.523523743973798,26.4704169613956,15.7100461540443,7.76816564849846,0,0,0,0,0,0,0,0,0,7.21465206048266,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,1.79970819298022,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,13.9382312594961,9.37674730568509,9.53579819250524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:130602006..130602019,+ | |||
}} |
Revision as of 18:43, 13 September 2013
Short description: | p@chr1:130602006..130602019, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:130602006..130602019, + |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.61e-13 | 32 |
hematopoietic oligopotent progenitor cell | 7.61e-13 | 32 |
hematopoietic stem cell | 7.61e-13 | 32 |
hematopoietic multipotent progenitor cell | 7.61e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 7.50e-11 | 25 |
lymphoid lineage restricted progenitor cell | 1.60e-09 | 12 |
CD4-positive, alpha-beta T cell | 2.35e-09 | 8 |
lymphocyte | 8.87e-09 | 13 |
common lymphoid progenitor | 8.87e-09 | 13 |
stem cell | 1.55e-08 | 97 |
connective tissue cell | 1.69e-08 | 46 |
mesenchymal cell | 1.69e-08 | 46 |
mature alpha-beta T cell | 2.47e-08 | 9 |
alpha-beta T cell | 2.47e-08 | 9 |
immature T cell | 2.47e-08 | 9 |
mature T cell | 2.47e-08 | 9 |
immature alpha-beta T cell | 2.47e-08 | 9 |
megakaryocyte progenitor cell | 1.84e-07 | 6 |
megakaryocyte | 1.84e-07 | 6 |
motile cell | 5.03e-07 | 54 |
T cell | 7.65e-07 | 11 |
pro-T cell | 7.65e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.69e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.14e-07 | 3 |
muscle cancer | 3.14e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.