FFCP PHASE1:Hg19::chr6:151678864..151678868,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9590|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=370|TSSclassifier=N|UniProt=|association_with_transcript=-201bp_to_AK024598_5end|coexpression_cluster_id=C953|description=CAGE_peak_6_at_AKAP12_5end|id=chr6:151678864..151678868,+|ontology_enrichment_celltype=CL:0000222!1.48e-11!119;CL:0000055!4.14e-11!180;CL:0000393!4.32e-09!60;CL:0000211!4.32e-09!60;CL:0000680!3.22e-08!57;CL:0000056!3.22e-08!57;CL:0000355!3.22e-08!57;CL:0002321!8.37e-08!248;CL:0000220!1.35e-07!246;CL:0000183!1.90e-07!59;CL:0000187!2.70e-07!54;CL:0002139!3.83e-07!24|ontology_enrichment_celltype_v019=CL:0002139;7.80e-09;24|ontology_enrichment_celltype_v019_2=CL:0000222,1.85e-10,121;CL:0002139,6.88e-09,24;CL:0000393,7.39e-08,61;CL:0000211,7.39e-08,61;CL:0000680,2.57e-07,58;CL:0000056,2.57e-07,58;CL:0000355,2.57e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!2.73e-15!347;UBERON:0000119!8.32e-15!312;UBERON:0000483!1.43e-14!309;UBERON:0000475!4.97e-14!365;UBERON:0000468!9.86e-14!659;UBERON:0000477!2.02e-11!286;UBERON:0000922!3.23e-11!612;UBERON:0000467!6.97e-11!625;UBERON:0000480!1.09e-10!626;UBERON:0002049!1.38e-10!79;UBERON:0007798!1.38e-10!79;UBERON:0002050!7.02e-10!605;UBERON:0005423!7.02e-10!605;UBERON:0000923!1.28e-09!604;UBERON:0005291!1.28e-09!604;UBERON:0006598!1.28e-09!604;UBERON:0002532!1.28e-09!604;UBERON:0004111!1.44e-09!241;UBERON:0002100!2.12e-09!216;UBERON:0000914!3.15e-09!83;UBERON:0002329!3.15e-09!83;UBERON:0003077!3.15e-09!83;UBERON:0003059!3.15e-09!83;UBERON:0007282!3.15e-09!83;UBERON:0009618!3.15e-09!83;UBERON:0007285!3.15e-09!83;UBERON:0004290!7.06e-09!70;UBERON:0002385!9.13e-09!63;UBERON:0001015!9.13e-09!63;UBERON:0000383!9.13e-09!63;UBERON:0000490!1.13e-08!138;UBERON:0001134!1.35e-08!61;UBERON:0002036!1.35e-08!61;UBERON:0003082!1.35e-08!61;UBERON:0005256!1.67e-08!143;UBERON:0000486!2.25e-08!82;UBERON:0000025!5.00e-08!194;UBERON:0003075!5.95e-08!86;UBERON:0007284!5.95e-08!86;UBERON:0000055!6.11e-08!69;UBERON:0000073!2.58e-07!94;UBERON:0001016!2.58e-07!94;UBERON:0002346!2.97e-07!90;UBERON:0001017!4.41e-07!82;UBERON:0001981!5.00e-07!60;UBERON:0007500!5.00e-07!60;UBERON:0004537!5.00e-07!60;UBERON:0006965!5.00e-07!60;UBERON:0001009!5.64e-07!113;UBERON:0005743!5.89e-07!86;UBERON:0004535!7.99e-07!110|ontology_enrichment_uberon_v019=UBERON:0006914;1.87e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.05e-09,78;UBERON:0007798,2.05e-09,78;UBERON:0000119,1.44e-08,309;UBERON:0000490,2.00e-08,148;UBERON:0000483,2.00e-08,306;UBERON:0000486,2.19e-08,83;UBERON:0007524,2.51e-08,73;UBERON:0002329,3.09e-08,71;UBERON:0003059,3.09e-08,71;UBERON:0007282,3.09e-08,71;UBERON:0004290,3.09e-08,71;UBERON:0009618,3.09e-08,71;UBERON:0007503,3.17e-08,78;UBERON:0003077,5.55e-08,72;UBERON:0007285,5.55e-08,72;UBERON:0001134,8.75e-08,62;UBERON:0002036,8.75e-08,62;UBERON:0003082,8.75e-08,62;UBERON:0006914,1.80e-07,25;UBERON:0002385,2.90e-07,64;UBERON:0001015,2.90e-07,64;UBERON:0000383,2.90e-07,64;UBERON:0000055,9.91e-07,68|phase1_expression=1.99846217197612,1.92690471501885,1.12763523276777,1.0007329835313,0,1.74467704820074,0,3.79031924056099,0.261185628199839,0.245733936501509,0,0,0,4.08428964768154,0.994192127183747,5.3786011716142,4.21886169616784,5.11217063271161,5.36726078669558,0.246242116153576,0,0.313454721478088,3.43483184557268,3.01123735160345,2.00868223351684,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,1.53435074212236,1.44575660953827,0,0.579386075843295,0,0,4.15953195521899,5.98669373148923,2.10803485663503,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.993812036833525,0,0.694281003215189,0,2.09749718104953,2.75118041940067,0.208994966536811,2.58416759169329,1.42306505074684,1.33888245105868,4.02829317109147,5.32190474002959,4.39311703586705,7.35326160691737,4.86085168729056,2.41109266367015,1.12264686313085,0.450445921933289,1.53316637465883,0,2.38162267109529,0,0,0,0,0.886413581652058,0.529636723252875,0.286836620748814,1.41867352879343,0,2.1349799145941,0.74000264525148,0,1.61652806483626,1.14423332179421,0.454072282934794,2.30470369792,0,3.43376084513353,0.570471821544449,4.18456305545043,1.87895197830024,0.809364721840658,1.12360645361799,1.63323337003915,0.491337269247072,0.723280468230358,2.37600571456411,1.7308685049499,0,0,0.841680569770331,0.250237039743928,0.277064115484183,0,1.22595118319608,3.00476117813194,2.38207584636044,0.179389635688862,0.640672166455702,0.635795703478686,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0.368199594569197,14.7097911705119,0,0.10075209822764,0.339121184620975,0,0,0,0.487894824518382,1.1927679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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9590 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=370 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-201bp_to_AK024598_5end | |||
|coexpression_cluster_id=C953 | |||
|description=CAGE_peak_6_at_AKAP12_5end | |||
|id=chr6:151678864..151678868,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.48e-11!119;CL:0000055!4.14e-11!180;CL:0000393!4.32e-09!60;CL:0000211!4.32e-09!60;CL:0000680!3.22e-08!57;CL:0000056!3.22e-08!57;CL:0000355!3.22e-08!57;CL:0002321!8.37e-08!248;CL:0000220!1.35e-07!246;CL:0000183!1.90e-07!59;CL:0000187!2.70e-07!54;CL:0002139!3.83e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.80e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.85e-10,121;CL:0002139,6.88e-09,24;CL:0000393,7.39e-08,61;CL:0000211,7.39e-08,61;CL:0000680,2.57e-07,58;CL:0000056,2.57e-07,58;CL:0000355,2.57e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.73e-15!347;UBERON:0000119!8.32e-15!312;UBERON:0000483!1.43e-14!309;UBERON:0000475!4.97e-14!365;UBERON:0000468!9.86e-14!659;UBERON:0000477!2.02e-11!286;UBERON:0000922!3.23e-11!612;UBERON:0000467!6.97e-11!625;UBERON:0000480!1.09e-10!626;UBERON:0002049!1.38e-10!79;UBERON:0007798!1.38e-10!79;UBERON:0002050!7.02e-10!605;UBERON:0005423!7.02e-10!605;UBERON:0000923!1.28e-09!604;UBERON:0005291!1.28e-09!604;UBERON:0006598!1.28e-09!604;UBERON:0002532!1.28e-09!604;UBERON:0004111!1.44e-09!241;UBERON:0002100!2.12e-09!216;UBERON:0000914!3.15e-09!83;UBERON:0002329!3.15e-09!83;UBERON:0003077!3.15e-09!83;UBERON:0003059!3.15e-09!83;UBERON:0007282!3.15e-09!83;UBERON:0009618!3.15e-09!83;UBERON:0007285!3.15e-09!83;UBERON:0004290!7.06e-09!70;UBERON:0002385!9.13e-09!63;UBERON:0001015!9.13e-09!63;UBERON:0000383!9.13e-09!63;UBERON:0000490!1.13e-08!138;UBERON:0001134!1.35e-08!61;UBERON:0002036!1.35e-08!61;UBERON:0003082!1.35e-08!61;UBERON:0005256!1.67e-08!143;UBERON:0000486!2.25e-08!82;UBERON:0000025!5.00e-08!194;UBERON:0003075!5.95e-08!86;UBERON:0007284!5.95e-08!86;UBERON:0000055!6.11e-08!69;UBERON:0000073!2.58e-07!94;UBERON:0001016!2.58e-07!94;UBERON:0002346!2.97e-07!90;UBERON:0001017!4.41e-07!82;UBERON:0001981!5.00e-07!60;UBERON:0007500!5.00e-07!60;UBERON:0004537!5.00e-07!60;UBERON:0006965!5.00e-07!60;UBERON:0001009!5.64e-07!113;UBERON:0005743!5.89e-07!86;UBERON:0004535!7.99e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;1.87e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.05e-09,78;UBERON:0007798,2.05e-09,78;UBERON:0000119,1.44e-08,309;UBERON:0000490,2.00e-08,148;UBERON:0000483,2.00e-08,306;UBERON:0000486,2.19e-08,83;UBERON:0007524,2.51e-08,73;UBERON:0002329,3.09e-08,71;UBERON:0003059,3.09e-08,71;UBERON:0007282,3.09e-08,71;UBERON:0004290,3.09e-08,71;UBERON:0009618,3.09e-08,71;UBERON:0007503,3.17e-08,78;UBERON:0003077,5.55e-08,72;UBERON:0007285,5.55e-08,72;UBERON:0001134,8.75e-08,62;UBERON:0002036,8.75e-08,62;UBERON:0003082,8.75e-08,62;UBERON:0006914,1.80e-07,25;UBERON:0002385,2.90e-07,64;UBERON:0001015,2.90e-07,64;UBERON:0000383,2.90e-07,64;UBERON:0000055,9.91e-07,68 | |||
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| |||
|short_description=p6@AKAP12 | |||
}} |
Revision as of 18:46, 13 September 2013
Short description: | p6@AKAP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_AKAP12_5end |
Coexpression cluster: | C953_Synoviocyte_Olfactory_Lens_embryonic_eye_rectum_tenocyte |
Association with transcript: | -201bp_to_AK024598_5end |
EntrezGene: | AKAP12 |
HGNC: | 370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.85e-10 | 121 |
endothelial cell of vascular tree | 6.88e-09 | 24 |
electrically responsive cell | 7.39e-08 | 61 |
electrically active cell | 7.39e-08 | 61 |
muscle precursor cell | 2.57e-07 | 58 |
myoblast | 2.57e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.05e-09 | 78 |
vascular system | 2.05e-09 | 78 |
cell layer | 1.44e-08 | 309 |
unilaminar epithelium | 2.00e-08 | 148 |
epithelium | 2.00e-08 | 306 |
multilaminar epithelium | 2.19e-08 | 83 |
dense mesenchyme tissue | 2.51e-08 | 73 |
somite | 3.09e-08 | 71 |
presomitic mesoderm | 3.09e-08 | 71 |
presumptive segmental plate | 3.09e-08 | 71 |
dermomyotome | 3.09e-08 | 71 |
trunk paraxial mesoderm | 3.09e-08 | 71 |
epithelial vesicle | 3.17e-08 | 78 |
paraxial mesoderm | 5.55e-08 | 72 |
presumptive paraxial mesoderm | 5.55e-08 | 72 |
skeletal muscle tissue | 8.75e-08 | 62 |
striated muscle tissue | 8.75e-08 | 62 |
myotome | 8.75e-08 | 62 |
squamous epithelium | 1.80e-07 | 25 |
muscle tissue | 2.90e-07 | 64 |
musculature | 2.90e-07 | 64 |
musculature of body | 2.90e-07 | 64 |
vessel | 9.91e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.