FFCP PHASE1:Hg19::chr6:168468189..168468206,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79981|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21240|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000336070,ENST00000506415,uc011egt.1_5end|coexpression_cluster_id=C28|description=CAGE_peak_4_at_FRMD1_5end|id=chr6:168468189..168468206,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;7.05e-34;2!UBERON:0004872;9.89e-11;7!UBERON:0006603;9.36e-08;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.57e-37!7;UBERON:0005418!1.78e-29!1;UBERON:0001389!1.78e-29!1;UBERON:0000026!1.78e-29!1;UBERON:0008784!1.78e-29!1;UBERON:0006058!1.78e-29!1;UBERON:0003663!1.78e-29!1;UBERON:0001383!1.78e-29!1;UBERON:0004256!1.78e-29!1;UBERON:0002529!1.78e-29!1;UBERON:0004708!1.78e-29!1;UBERON:0002101!1.78e-29!1;UBERON:0004709!1.78e-29!1;UBERON:0003661!1.78e-29!1;UBERON:0002471!1.78e-29!1;UBERON:0004357!1.78e-29!1;UBERON:0009872!1.78e-29!1;UBERON:0004347!1.78e-29!1;UBERON:0005420!1.78e-29!1;UBERON:0005732!1.78e-29!1;UBERON:0006057!1.78e-29!1;UBERON:0000978!1.78e-29!1;UBERON:0002103!1.78e-29!1;UBERON:0001665!1.78e-29!1;UBERON:0003823!1.78e-29!1;UBERON:0000154!1.78e-29!1;UBERON:0005733!1.78e-29!1;UBERON:0005730!1.78e-29!1;UBERON:0002370!1.78e-29!4;UBERON:0005058!1.78e-29!4;UBERON:0009113!1.78e-29!4;UBERON:0003295!1.78e-29!4;UBERON:0005562!1.78e-29!4;UBERON:0000974!3.03e-26!10;UBERON:0003351!4.86e-20!6;UBERON:0001630!1.78e-15!2;UBERON:0005090!1.78e-15!2;UBERON:0000341!2.05e-15!2;UBERON:0003408!1.89e-12!10;UBERON:0001042!1.89e-12!10;UBERON:0009145!1.89e-12!10;UBERON:0006562!2.07e-11!11;UBERON:0009722!2.07e-11!11;UBERON:0007690!2.07e-11!11;UBERON:0002106!1.20e-10!3;UBERON:0004854!1.20e-10!3;UBERON:0009034!1.20e-10!3;UBERON:0002095!1.20e-10!3;UBERON:0004782!1.20e-10!3;UBERON:0003281!1.20e-10!3;UBERON:0009664!1.20e-10!3;UBERON:0002296!1.20e-10!3;UBERON:0005602!1.20e-10!3;UBERON:0001179!1.20e-10!3;UBERON:0006293!1.20e-10!3;UBERON:0005057!1.50e-10!26;UBERON:0008814!1.27e-08!15;UBERON:0001557!5.34e-07!19|ontology_enrichment_uberon_v019=UBERON:0002370;4.61e-131;2!UBERON:0005058;4.61e-131;2!UBERON:0009113;4.61e-131;2!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0001638;1.21e-08;9!UBERON:0003920;1.21e-08;9!UBERON:0004582;1.21e-08;9!UBERON:0002390;2.43e-07;32!UBERON:0002368;2.43e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.40e-66,4;UBERON:0005058,2.40e-66,4;UBERON:0009113,2.40e-66,4;UBERON:0003295,2.40e-66,4;UBERON:0005562,2.40e-66,4;UBERON:0003351,9.76e-45,6;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000974,2.08e-27,10;UBERON:0003408,2.08e-27,10;UBERON:0001042,2.08e-27,10;UBERON:0009145,2.08e-27,10;UBERON:0006562,4.86e-25,11;UBERON:0009722,4.86e-25,11;UBERON:0007690,4.86e-25,11;UBERON:0008814,8.40e-16,18;UBERON:0001557,4.91e-15,19;UBERON:0004807,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0002368,1.09e-08,35;UBERON:0001638,1.21e-08,9;UBERON:0003920,1.21e-08,9;UBERON:0004582,1.21e-08,9;UBERON:0000949,5.42e-07,45;UBERON:0000072,9.72e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,3.22944549180031,4.2831552864142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40891655513718,0|short_description=p4@FRMD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79981 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21240 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000336070,ENST00000506415,uc011egt.1_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_FRMD1_5end | |||
|id=chr6:168468189..168468206,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;7.05e-34;2!UBERON:0004872;9.89e-11;7!UBERON:0006603;9.36e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.57e-37!7;UBERON:0005418!1.78e-29!1;UBERON:0001389!1.78e-29!1;UBERON:0000026!1.78e-29!1;UBERON:0008784!1.78e-29!1;UBERON:0006058!1.78e-29!1;UBERON:0003663!1.78e-29!1;UBERON:0001383!1.78e-29!1;UBERON:0004256!1.78e-29!1;UBERON:0002529!1.78e-29!1;UBERON:0004708!1.78e-29!1;UBERON:0002101!1.78e-29!1;UBERON:0004709!1.78e-29!1;UBERON:0003661!1.78e-29!1;UBERON:0002471!1.78e-29!1;UBERON:0004357!1.78e-29!1;UBERON:0009872!1.78e-29!1;UBERON:0004347!1.78e-29!1;UBERON:0005420!1.78e-29!1;UBERON:0005732!1.78e-29!1;UBERON:0006057!1.78e-29!1;UBERON:0000978!1.78e-29!1;UBERON:0002103!1.78e-29!1;UBERON:0001665!1.78e-29!1;UBERON:0003823!1.78e-29!1;UBERON:0000154!1.78e-29!1;UBERON:0005733!1.78e-29!1;UBERON:0005730!1.78e-29!1;UBERON:0002370!1.78e-29!4;UBERON:0005058!1.78e-29!4;UBERON:0009113!1.78e-29!4;UBERON:0003295!1.78e-29!4;UBERON:0005562!1.78e-29!4;UBERON:0000974!3.03e-26!10;UBERON:0003351!4.86e-20!6;UBERON:0001630!1.78e-15!2;UBERON:0005090!1.78e-15!2;UBERON:0000341!2.05e-15!2;UBERON:0003408!1.89e-12!10;UBERON:0001042!1.89e-12!10;UBERON:0009145!1.89e-12!10;UBERON:0006562!2.07e-11!11;UBERON:0009722!2.07e-11!11;UBERON:0007690!2.07e-11!11;UBERON:0002106!1.20e-10!3;UBERON:0004854!1.20e-10!3;UBERON:0009034!1.20e-10!3;UBERON:0002095!1.20e-10!3;UBERON:0004782!1.20e-10!3;UBERON:0003281!1.20e-10!3;UBERON:0009664!1.20e-10!3;UBERON:0002296!1.20e-10!3;UBERON:0005602!1.20e-10!3;UBERON:0001179!1.20e-10!3;UBERON:0006293!1.20e-10!3;UBERON:0005057!1.50e-10!26;UBERON:0008814!1.27e-08!15;UBERON:0001557!5.34e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.61e-131;2!UBERON:0005058;4.61e-131;2!UBERON:0009113;4.61e-131;2!UBERON:0004177;2.19e-53;5!UBERON:0005057;2.19e-53;5!UBERON:0000077;6.25e-11;27!UBERON:0002405;6.25e-11;27!UBERON:0001638;1.21e-08;9!UBERON:0003920;1.21e-08;9!UBERON:0004582;1.21e-08;9!UBERON:0002390;2.43e-07;32!UBERON:0002368;2.43e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.40e-66,4;UBERON:0005058,2.40e-66,4;UBERON:0009113,2.40e-66,4;UBERON:0003295,2.40e-66,4;UBERON:0005562,2.40e-66,4;UBERON:0003351,9.76e-45,6;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000974,2.08e-27,10;UBERON:0003408,2.08e-27,10;UBERON:0001042,2.08e-27,10;UBERON:0009145,2.08e-27,10;UBERON:0006562,4.86e-25,11;UBERON:0009722,4.86e-25,11;UBERON:0007690,4.86e-25,11;UBERON:0008814,8.40e-16,18;UBERON:0001557,4.91e-15,19;UBERON:0004807,1.40e-10,28;UBERON:0000077,2.96e-10,29;UBERON:0002368,1.09e-08,35;UBERON:0001638,1.21e-08,9;UBERON:0003920,1.21e-08,9;UBERON:0004582,1.21e-08,9;UBERON:0000949,5.42e-07,45;UBERON:0000072,9.72e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,3.22944549180031,4.2831552864142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40891655513718,0 | |||
|short_description=p4@FRMD1 | |||
}} |
Revision as of 19:24, 13 September 2013
Short description: | p4@FRMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FRMD1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000336070, ENST00000506415, uc011egt.1_5end |
EntrezGene: | FRMD1 |
HGNC: | 21240 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.40e-66 | 4 |
hemolymphoid system gland | 2.40e-66 | 4 |
thymic region | 2.40e-66 | 4 |
pharyngeal gland | 2.40e-66 | 4 |
thymus primordium | 2.40e-66 | 4 |
pharyngeal epithelium | 9.76e-45 | 6 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
neck | 2.08e-27 | 10 |
gland of gut | 2.08e-27 | 10 |
chordate pharynx | 2.08e-27 | 10 |
pharyngeal region of foregut | 2.08e-27 | 10 |
pharynx | 4.86e-25 | 11 |
entire pharyngeal arch endoderm | 4.86e-25 | 11 |
early pharyngeal endoderm | 4.86e-25 | 11 |
pharyngeal arch system | 8.40e-16 | 18 |
upper respiratory tract | 4.91e-15 | 19 |
respiratory system epithelium | 1.40e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
endocrine gland | 1.09e-08 | 35 |
vein | 1.21e-08 | 9 |
venous blood vessel | 1.21e-08 | 9 |
venous system | 1.21e-08 | 9 |
endocrine system | 5.42e-07 | 45 |
segment of respiratory tract | 9.72e-07 | 47 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.