FFCP PHASE1:Hg19::chr6:32522809..32522827,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C414|description=CAGE_peak_at_chr6:32522809..32522827,-|id=chr6:32522809..32522827,-|ontology_enrichment_celltype=CL:0002097!3.71e-09!2;CL:1000487!6.94e-09!2;CL:0000077!6.32e-08!19|ontology_enrichment_celltype_v019=CL:0002097;5.56e-26;2!CL:0000174;8.00e-18;3!CL:0000077;1.81e-11;19!CL:0000150;7.91e-07;9!CL:0000163;7.91e-07;9|ontology_enrichment_celltype_v019_2=CL:0002097,5.56e-26,2;CL:0000174,8.00e-18,3;CL:0000077,1.81e-11,19;CL:0000150,7.91e-07,9;CL:0000163,7.91e-07,9|ontology_enrichment_development_v019=UBERON:0001041;1.13e-07;30|ontology_enrichment_disease=DOID:3112!1.65e-16!1|ontology_enrichment_disease_v019=DOID:5409;1.13e-13;4!DOID:170;1.32e-09;6!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9|ontology_enrichment_disease_v019_2=DOID:5409,1.13e-13,4;DOID:170,1.32e-09,6;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9|ontology_enrichment_uberon=UBERON:0001282!4.72e-17!1;UBERON:0009842!4.72e-17!1;UBERON:0003704!4.72e-17!1;UBERON:0001171!4.72e-17!1;UBERON:0001172!4.72e-17!1|ontology_enrichment_uberon_v019=UBERON:0001282;1.46e-50;1!UBERON:0009842;1.46e-50;1!UBERON:0003704;1.46e-50;1!UBERON:0001171;1.46e-50;1!UBERON:0001172;1.46e-50;1!UBERON:0001280;6.76e-18;3!UBERON:0004647;6.76e-18;3!UBERON:0002369;8.00e-18;3!UBERON:0001235;8.00e-18;3!UBERON:0006858;8.00e-18;3!UBERON:0002394;8.82e-14;4!UBERON:0003928;8.82e-14;4!UBERON:0002294;1.89e-08;7!UBERON:0001173;1.89e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.46e-50,1;UBERON:0009842,1.46e-50,1;UBERON:0003704,1.46e-50,1;UBERON:0001171,1.46e-50,1;UBERON:0001172,1.46e-50,1;UBERON:0001280,6.76e-18,3;UBERON:0004647,6.76e-18,3;UBERON:0005171,6.76e-18,3;UBERON:0002369,8.00e-18,3;UBERON:0001235,8.00e-18,3;UBERON:0006858,8.00e-18,3;UBERON:0002394,1.22e-09,6;UBERON:0003928,1.22e-09,6;UBERON:0002294,7.48e-07,9;UBERON:0001173,7.48e-07,9;UBERON:0004912,7.48e-07,9;UBERON:0002368,9.98e-07,35|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5725551030612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0,0,0,0,0,0,0,0,3.85994864474866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2644426535001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:32522809..32522827,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C414 | |||
|description=CAGE_peak_at_chr6:32522809..32522827,- | |||
|id=chr6:32522809..32522827,- | |||
|ontology_enrichment_celltype=CL:0002097!3.71e-09!2;CL:1000487!6.94e-09!2;CL:0000077!6.32e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002097;5.56e-26;2!CL:0000174;8.00e-18;3!CL:0000077;1.81e-11;19!CL:0000150;7.91e-07;9!CL:0000163;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,5.56e-26,2;CL:0000174,8.00e-18,3;CL:0000077,1.81e-11,19;CL:0000150,7.91e-07,9;CL:0000163,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.13e-07;30 | |||
|ontology_enrichment_disease=DOID:3112!1.65e-16!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.13e-13;4!DOID:170;1.32e-09;6!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.13e-13,4;DOID:170,1.32e-09,6;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001282!4.72e-17!1;UBERON:0009842!4.72e-17!1;UBERON:0003704!4.72e-17!1;UBERON:0001171!4.72e-17!1;UBERON:0001172!4.72e-17!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.46e-50;1!UBERON:0009842;1.46e-50;1!UBERON:0003704;1.46e-50;1!UBERON:0001171;1.46e-50;1!UBERON:0001172;1.46e-50;1!UBERON:0001280;6.76e-18;3!UBERON:0004647;6.76e-18;3!UBERON:0002369;8.00e-18;3!UBERON:0001235;8.00e-18;3!UBERON:0006858;8.00e-18;3!UBERON:0002394;8.82e-14;4!UBERON:0003928;8.82e-14;4!UBERON:0002294;1.89e-08;7!UBERON:0001173;1.89e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.46e-50,1;UBERON:0009842,1.46e-50,1;UBERON:0003704,1.46e-50,1;UBERON:0001171,1.46e-50,1;UBERON:0001172,1.46e-50,1;UBERON:0001280,6.76e-18,3;UBERON:0004647,6.76e-18,3;UBERON:0005171,6.76e-18,3;UBERON:0002369,8.00e-18,3;UBERON:0001235,8.00e-18,3;UBERON:0006858,8.00e-18,3;UBERON:0002394,1.22e-09,6;UBERON:0003928,1.22e-09,6;UBERON:0002294,7.48e-07,9;UBERON:0001173,7.48e-07,9;UBERON:0004912,7.48e-07,9;UBERON:0002368,9.98e-07,35 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5725551030612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0,0,0,0,0,0,0,0,3.85994864474866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2644426535001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:32522809..32522827,- | |||
}} |
Revision as of 20:24, 13 September 2013
Short description: | p@chr6:32522809..32522827, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:32522809..32522827, - |
Coexpression cluster: | C414_cholangiocellular_testis_gall_pagetoid_mesothelioma_thyroid_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 5.56e-26 | 2 |
steroid hormone secreting cell | 8.00e-18 | 3 |
mesothelial cell | 1.81e-11 | 19 |
glandular epithelial cell | 7.91e-07 | 9 |
endocrine cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.46e-50 | 1 |
acinus | 1.46e-50 | 1 |
intrahepatic bile duct | 1.46e-50 | 1 |
portal lobule | 1.46e-50 | 1 |
hepatic acinus | 1.46e-50 | 1 |
liver parenchyma | 6.76e-18 | 3 |
liver lobule | 6.76e-18 | 3 |
hepatic duct | 6.76e-18 | 3 |
adrenal gland | 8.00e-18 | 3 |
adrenal cortex | 8.00e-18 | 3 |
adrenal/interrenal gland | 8.00e-18 | 3 |
bile duct | 1.22e-09 | 6 |
digestive system duct | 1.22e-09 | 6 |
biliary system | 7.48e-07 | 9 |
biliary tree | 7.48e-07 | 9 |
biliary bud | 7.48e-07 | 9 |
endocrine gland | 9.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.13e-13 | 4 |
endocrine gland cancer | 1.32e-09 | 6 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
lung carcinoma | 8.37e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.