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FFCP PHASE1:Mm9::chr1:99992173..99992225,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18484|HGNC=|UniProt=P97467,F8VQA4,E9Q8R9,A1L331|association_with_transcript=0bp_to_ENSMUST00000058762,ENSMUST00000097625,ENSMUST00000163007,ENSMUST00000164496,NM_013626,uc007cfo.1,uc007cfp.1_5end|description=CAGE_peak_3_at_Pam_5end|id=chr1:99992173..99992225,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!4.87e-13!23;UBERON:0001009!4.87e-13!23;UBERON:0004111!1.01e-11!122;UBERON:0000025!6.80e-11!114;UBERON:0007100!3.50e-10!18;UBERON:0000948!3.50e-10!18;UBERON:0005498!3.50e-10!18;UBERON:0004140!3.50e-10!18;UBERON:0009881!3.50e-10!18;UBERON:0004141!3.50e-10!18;UBERON:0003084!3.50e-10!18;UBERON:0007005!3.50e-10!18;UBERON:0004139!3.50e-10!18;UBERON:0004291!3.50e-10!18;UBERON:0002616!9.88e-08!49;UBERON:0004121!1.10e-07!102;UBERON:0000924!1.10e-07!102;UBERON:0006601!1.10e-07!102;UBERON:0000955!1.12e-07!50;UBERON:0006238!1.12e-07!50;UBERON:0000033!1.38e-07!63;UBERON:0004872!1.39e-07!33;UBERON:0002791!4.95e-07!29;UBERON:0003528!4.95e-07!29;UBERON:0001893!4.95e-07!29;UBERON:0001017!5.92e-07!73;UBERON:0005743!5.92e-07!73;UBERON:0003080!7.68e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.60e-13,92;UBERON:0004535,4.86e-13,23;UBERON:0001009,4.86e-13,23;UBERON:0004111,1.08e-11,122;UBERON:0000025,7.30e-11,114;UBERON:0007100,3.50e-10,18;UBERON:0000948,3.50e-10,18;UBERON:0005498,3.50e-10,18;UBERON:0004140,3.50e-10,18;UBERON:0009881,3.50e-10,18;UBERON:0004141,3.50e-10,18;UBERON:0003084,3.50e-10,18;UBERON:0007005,3.50e-10,18;UBERON:0004139,3.50e-10,18;UBERON:0004291,3.50e-10,18;UBERON:0004872,1.39e-07,33;UBERON:0004121,4.30e-07,95;UBERON:0000924,4.30e-07,95;UBERON:0006601,4.30e-07,95;UBERON:0003528,4.95e-07,29;UBERON:0002791,4.95e-07,29;UBERON:0001893,4.95e-07,29;UBERON:0000073,5.31e-07,54;UBERON:0001017,5.92e-07,73;UBERON:0003080,7.67e-07,40|phase1_expression=36.9943836812074,3.14077866875425,4.09499315450582,0.90739263392049,1.00179145989269,2.18243053485457,1.63528848416868,2.58246646883153,1.54867594366833,0.468129052643987,1.36974374580404,1.43589886191606,2.9104124088305,1.39872643870396,0.333109761815663,1.61980213911861,0,1.26184866143295,0.548457734422955,0,13.8620562946244,2.38298282882125,1.30599894569468,0.799962113967033,2.98232065387321,5.16808767703518,3.01533397311352,1.72376986148711,2.66032787238923,1.51218077855958,2.88249663851896,0,0,0,1.44425809875637,1.66234645358492,2.45003227514843,31.808403936005,10.1573594788094,13.088093599345,17.6469446409304,25.2726829434625,20.3914348273085,64.2073771675444,69.9500825414651,47.5386088098755,7.04152209913235,19.4042389178597,53.3837424044767,36.358391126891,19.0381533410493,24.4379359420452,0,1.45072428402269,3.02484419228218,14.9210472900849,25.5014761545493,34.5500301825886,11.5320382689971,9.52183762689659,10.1413024560989,9.82649143000483,8.00365316500025,11.6986963246582,5.93319817540185,12.0781619540837,11.085204089181,7.30014780110954,25.5076446278855,20.9259204414121,22.2944459032465,8.2838785477103,9.718215801871,18.0061474845982,15.7186572469908,16.5459381589804,45.1475112097494,29.1127130834228,28.2636021191488,11.8697658957174,8.5083508550241,12.5019208933622,30.4309468911505,38.2678574821542,38.8107549353098,12.0797720044204,10.9626194215309,10.2519695203915,6.20954785332109,13.2250230186875,22.0297011413275,6.88339101585109,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,7.3031098468511,22.8376632254597,15.5871602761721,18.0203183000274,11.1266301623578,38.4979432242953,17.8363667794652,28.4426681261332,8.87613268145978,7.85415582972806,9.0994400102661,6.96521666286266,8.2860122767095,29.688427812965,10.4091196059682,10.9607572192371,12.6838523490832,11.0027527603414,12.346814249249,25.2589848572648,8.89901883843746,22.1237016087465,11.4999371753484,19.4120219936891,15.0172232553068,8.727754556434,5.59175283654366,4.68449275218475,6.70229461803056,4.85368404896324,8.98613433794402,3.59941638596045,7.24300294316469,36.3991253753719,15.0975198930147,18.8481528169297,18.7730265807659,17.6443665557928,23.0644729461112,20.6046404096052,26.3763952372319,16.6705340617525,6.82351447770922,15.7831391914855,5.59517904739626,10.1156925950728,10.0834792690996,11.7549757911858,15.7164313039567,10.1209839025031,13.8678552348399,11.6416516832557,5.17363183038821,10.2117283290622,12.4925298156404,13.3709396780821,18.3511184488895,20.89512999133,19.7550850951626,11.3449532086541,3.51106593656617,2.57347907114715,7.38825098428541,30.0332370176478,22.2799756982041,30.6105504483725,31.2503050972478,35.6143259462801,40.1094493507183,35.345159602062,41.8506506183406,43.7870033876886,32.2537305830422,26.7592966448925,28.3740833410495,22.3685980760758,19.9790604914856,22.5466783517425,13.24826675954,18.9344486777883,4.62586296177317,4.7601101999438,11.9441420299731,13.4697269679054,11.7269389803105,12.1010114774006,14.4545728499166,15.2180500890047,9.49058123089023,13.9994111515409,18.598805451219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|EntrezGene=18484
|HGNC=
|UniProt=P97467,F8VQA4,E9Q8R9,A1L331
|association_with_transcript=0bp_to_ENSMUST00000058762,ENSMUST00000097625,ENSMUST00000163007,ENSMUST00000164496,NM_013626,uc007cfo.1,uc007cfp.1_5end
|description=CAGE_peak_3_at_Pam_5end
|id=chr1:99992173..99992225,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!4.87e-13!23;UBERON:0001009!4.87e-13!23;UBERON:0004111!1.01e-11!122;UBERON:0000025!6.80e-11!114;UBERON:0007100!3.50e-10!18;UBERON:0000948!3.50e-10!18;UBERON:0005498!3.50e-10!18;UBERON:0004140!3.50e-10!18;UBERON:0009881!3.50e-10!18;UBERON:0004141!3.50e-10!18;UBERON:0003084!3.50e-10!18;UBERON:0007005!3.50e-10!18;UBERON:0004139!3.50e-10!18;UBERON:0004291!3.50e-10!18;UBERON:0002616!9.88e-08!49;UBERON:0004121!1.10e-07!102;UBERON:0000924!1.10e-07!102;UBERON:0006601!1.10e-07!102;UBERON:0000955!1.12e-07!50;UBERON:0006238!1.12e-07!50;UBERON:0000033!1.38e-07!63;UBERON:0004872!1.39e-07!33;UBERON:0002791!4.95e-07!29;UBERON:0003528!4.95e-07!29;UBERON:0001893!4.95e-07!29;UBERON:0001017!5.92e-07!73;UBERON:0005743!5.92e-07!73;UBERON:0003080!7.68e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.60e-13,92;UBERON:0004535,4.86e-13,23;UBERON:0001009,4.86e-13,23;UBERON:0004111,1.08e-11,122;UBERON:0000025,7.30e-11,114;UBERON:0007100,3.50e-10,18;UBERON:0000948,3.50e-10,18;UBERON:0005498,3.50e-10,18;UBERON:0004140,3.50e-10,18;UBERON:0009881,3.50e-10,18;UBERON:0004141,3.50e-10,18;UBERON:0003084,3.50e-10,18;UBERON:0007005,3.50e-10,18;UBERON:0004139,3.50e-10,18;UBERON:0004291,3.50e-10,18;UBERON:0004872,1.39e-07,33;UBERON:0004121,4.30e-07,95;UBERON:0000924,4.30e-07,95;UBERON:0006601,4.30e-07,95;UBERON:0003528,4.95e-07,29;UBERON:0002791,4.95e-07,29;UBERON:0001893,4.95e-07,29;UBERON:0000073,5.31e-07,54;UBERON:0001017,5.92e-07,73;UBERON:0003080,7.67e-07,40
|phase1_expression=36.9943836812074,3.14077866875425,4.09499315450582,0.90739263392049,1.00179145989269,2.18243053485457,1.63528848416868,2.58246646883153,1.54867594366833,0.468129052643987,1.36974374580404,1.43589886191606,2.9104124088305,1.39872643870396,0.333109761815663,1.61980213911861,0,1.26184866143295,0.548457734422955,0,13.8620562946244,2.38298282882125,1.30599894569468,0.799962113967033,2.98232065387321,5.16808767703518,3.01533397311352,1.72376986148711,2.66032787238923,1.51218077855958,2.88249663851896,0,0,0,1.44425809875637,1.66234645358492,2.45003227514843,31.808403936005,10.1573594788094,13.088093599345,17.6469446409304,25.2726829434625,20.3914348273085,64.2073771675444,69.9500825414651,47.5386088098755,7.04152209913235,19.4042389178597,53.3837424044767,36.358391126891,19.0381533410493,24.4379359420452,0,1.45072428402269,3.02484419228218,14.9210472900849,25.5014761545493,34.5500301825886,11.5320382689971,9.52183762689659,10.1413024560989,9.82649143000483,8.00365316500025,11.6986963246582,5.93319817540185,12.0781619540837,11.085204089181,7.30014780110954,25.5076446278855,20.9259204414121,22.2944459032465,8.2838785477103,9.718215801871,18.0061474845982,15.7186572469908,16.5459381589804,45.1475112097494,29.1127130834228,28.2636021191488,11.8697658957174,8.5083508550241,12.5019208933622,30.4309468911505,38.2678574821542,38.8107549353098,12.0797720044204,10.9626194215309,10.2519695203915,6.20954785332109,13.2250230186875,22.0297011413275,6.88339101585109,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,7.3031098468511,22.8376632254597,15.5871602761721,18.0203183000274,11.1266301623578,38.4979432242953,17.8363667794652,28.4426681261332,8.87613268145978,7.85415582972806,9.0994400102661,6.96521666286266,8.2860122767095,29.688427812965,10.4091196059682,10.9607572192371,12.6838523490832,11.0027527603414,12.346814249249,25.2589848572648,8.89901883843746,22.1237016087465,11.4999371753484,19.4120219936891,15.0172232553068,8.727754556434,5.59175283654366,4.68449275218475,6.70229461803056,4.85368404896324,8.98613433794402,3.59941638596045,7.24300294316469,36.3991253753719,15.0975198930147,18.8481528169297,18.7730265807659,17.6443665557928,23.0644729461112,20.6046404096052,26.3763952372319,16.6705340617525,6.82351447770922,15.7831391914855,5.59517904739626,10.1156925950728,10.0834792690996,11.7549757911858,15.7164313039567,10.1209839025031,13.8678552348399,11.6416516832557,5.17363183038821,10.2117283290622,12.4925298156404,13.3709396780821,18.3511184488895,20.89512999133,19.7550850951626,11.3449532086541,3.51106593656617,2.57347907114715,7.38825098428541,30.0332370176478,22.2799756982041,30.6105504483725,31.2503050972478,35.6143259462801,40.1094493507183,35.345159602062,41.8506506183406,43.7870033876886,32.2537305830422,26.7592966448925,28.3740833410495,22.3685980760758,19.9790604914856,22.5466783517425,13.24826675954,18.9344486777883,4.62586296177317,4.7601101999438,11.9441420299731,13.4697269679054,11.7269389803105,12.1010114774006,14.4545728499166,15.2180500890047,9.49058123089023,13.9994111515409,18.5988054512199,17.5081695396213,15.4021628824105,9.88701349519644,6.70027954611552,6.57166201739412,7.39704813717019,8.3401414205102,10.1436962105772,11.2008230314923,7.95205197387266,11.3620028222316,19.0974342115257,10.1851002105925,12.0889020437859,10.1185674415876,2.66807364378434,5.00535317148282,2.75182593158484,3.14806957338795,3.85434230638156,3.37648023653384,3.05551022137704,4.31544206176216,6.97181475132652,4.3929826110093,18.6898668485561,9.30352369171258,7.17686648163489,7.57736633841335,3.04975602987251,3.37710464954357,31.4080423283228,12.127450353311,11.2445833744998,14.5980773766662,11.7345124144251,15.0755631697634,16.1869675802489,18.5376965464909,25.2216230569906,27.9045508957456,45.4446090673838,29.9869865929801,27.1115421529456,27.3386720719057,9.04747703635634,6.52686820582452,3.44234991113325,14.9005843004556,20.7110261084252,17.2301179290539,20.1639982813311,10.856249869788,6.94118082715765,7.80877488593277,7.97066571611356,9.79772071605463,14.9275111635204,17.8338214396964,13.7635638569464,10.8134667427185,10.6727700045561,11.5675673911851,19.1619115031163,16.025904330053,33.3918266674831,17.9817434040064,0,4.12727081463468,6.95344181018927,6.22396763194464,5.31543407185391,7.99331384654211,12.9214146584111,10.5424781548477,11.4079161083111,10.4292130118819,10.5418608574999,8.25084345985495,41.5336319019621,7.38250485528372,5.30370603509293,7.50179622610573,9.57637261668277,10.167022603318,11.3538824215463,13.0919928119278,3.98941903708308,3.38931313382112,7.71849393192367,17.3130565588554,16.1464426695906,20.2048298509322,18.2639686324799,12.3105674808796,10.2018292820448,26.8866687915239,6.1513517087227,10.9385040020508,7.9633646768976,5.27431679613135,3.96413260390973,3.88922894451088,9.68877050964975,8.39708713941948,9.53579819250524,6.68269432610579,10.7554237817586,14.6390016331331,13.8246836251906,14.4270924249983,13.9752040797554,17.8020937227963,26.6970661992835,13.0877970992015,10.7580427832188,9.32008969630389,0.56369293868419,7.7748603942869,6.12196414691261,7.77804753376191,9.17034746691891,10.8131920314098,12.5572245350957,15.624526181274,9.43734099831398,2.17425708743405,3.45636007509439,4.4241556887945,3.44632865993279,5.34096977257102,6.23619950293416,3.93858730468459,6.55648470778174,6.37035882455835,2.95379054349154,4.54349024766664,5.63930369246999,5.04130925684203,5.16526767920688,4.61816839873581,4.55819918508119,19.4988129909082,1.10992976687032,1.07656627931371,0.503653849092235,36.8992124601484,11.4486310025221,14.1026750685794,20.3649960125113,6.52043735245972,15.2482997506608,13.8097570952153,12.6037012956667,19.9349691518678,17.1270629942661,8.3093328712867,14.8504950050997,15.7612421128477,16.3131267234314,18.6393712230655,4.04770655578289,12.369771075432,8.19521307619844,10.9398022680732,5.03071590307158,6.25067928730048,11.1123363900808,8.85950746127245,11.2321723357135,13.8983466470089,12.4204856946217,12.0720858487089,12.6416035084341,15.9422629488125,15.0480928663707,14.7651044297753,14.4855407431069,14.2752823143142,11.1263193216893,11.6287146906174,10.6289468239479,10.2935967572416,13.5908628269973,11.1916740806893,11.104906889009,12.9460350074265,14.8171658026946,10.5227884575137,9.09887562767274,9.53941861818155,17.0834426098811,13.7906275325789,8.18462086339379,13.634442024365,15.8183421004536,16.7373087218424,13.8019648982791,14.396360621236,12.8163182486125,21.838550492832,15.7670128221887
|short_description=p3@Pam
}}

Revision as of 21:24, 13 September 2013

Short description:p3@Pam
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pam_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000058762, ENSMUST00000097625, ENSMUST00000163007, ENSMUST00000164496, NM_013626, uc007cfo.1, uc007cfp.1_5end
EntrezGene:Pam
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pam

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G736.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G831.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H225.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D864.21
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D969.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B347.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B853.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C336.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.50
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C534.55
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.08
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.51
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.93
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.29
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.01
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F329.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.87
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E538.27
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D96.21
Mouse Schwann, donor2.CNhs12573.11746-123F913.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.02
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H138.50
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D729.69
adrenal gland, embryo E14.CNhs11038.406-44C510.41
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I112.68
adrenal gland, embryo E18.CNhs11026.1262-18F511.00
adrenal gland, neonate N00.CNhs11191.1311-23C112.35
adrenal gland, neonate N25.CNhs11223.1377-27I325.26
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H122.12
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F519.41
bone (os femoris), neonate N16.CNhs11225.1525-43A615.02
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.24
corpora quadrigemina, adult.CNhs10501.16-22A436.40
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F118.85
cortex, adult.CNhs10473.12-14D518.77
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F223.06
diencephalon, neonate N30.CNhs11201.1388-42B220.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B126.38
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.67
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G415.78
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E210.12
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D411.75
eyeball, neonate N00.CNhs11207.633-15C615.72
eyeball, neonate N01.CNhs11140.1532-43E710.12
eyeball, neonate N02.CNhs11205.1551-44G813.87
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E212.49
forelimb, embryo E14.CNhs10577.413-26A813.37
forelimb, embryo E15.CNhs11007.437-20E718.35
forelimb, embryo E17.CNhs10598.1517-43C420.90
forelimb, embryo E18.CNhs11008.1520-43B519.76
gonad, embryo E13.CNhs11044.1564-45I611.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.39
heart, embryo E11.CNhs10586.331-24E930.03
heart, embryo E12.CNhs11015.353-12F522.28
heart, embryo E13.CNhs11013.376-3I930.61
heart, embryo E14.CNhs10597.403-26D431.25
heart, embryo E15.CNhs11017.431-16C835.61
heart, embryo E16.CNhs11021.457-17C640.11
heart, embryo E17.CNhs11025.479-18E535.35
heart, embryo E18.CNhs11030.1283-20G341.85
heart, neonate N00.CNhs11213.639-21E343.79
heart, neonate N03.CNhs11221.1349-25I232.25
heart, neonate N10.CNhs11118.749-24G126.76
heart, neonate N16.CNhs11209.782-15G128.37
heart, neonate N20.CNhs11127.821-26I622.37
heart, neonate N25.CNhs11196.1351-25D319.98
heart, neonate N30.CNhs11202.1390-42D222.55
hippocampus, adult.CNhs10478.13-16E813.25
hippocampus, neonate N00.CNhs11228.627-43G118.93
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I511.94
intestine, embryo E13.CNhs11010.381-16D513.47
intestine, embryo E15.CNhs10602.976-16D811.73
intestine, embryo E16.CNhs10585.463-22H412.10
intestine, embryo E17.CNhs10582.482-18D314.45
intestine, embryo E18.CNhs10526.1289-20F715.22
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E914.00
intestine, neonate N06.CNhs11102.688-20B818.60
intestine, neonate N07.CNhs11095.720-20F217.51
intestine, neonate N10.CNhs11098.755-23A515.40
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G16.57
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F88.34
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G711.36
kidney, neonate N10.CNhs11206.758-6D519.10
kidney, neonate N20.CNhs11113.832-19I110.19
kidney, neonate N25.CNhs11122.1353-25F312.09
kidney, neonate N30.CNhs11203.1385-42H110.12
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F85.01
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F46.97
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B131.41
lung, embryo E12.CNhs10522.354-16G212.13
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C514.60
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A615.08
lung, embryo E18.CNhs10583.1287-20I616.19
lung, neonate N00.CNhs11224.640-42C618.54
lung, neonate N06.CNhs11212.683-20E525.22
lung, neonate N07.CNhs11111.715-19A327.90
lung, neonate N10.CNhs11219.750-23E645.44
lung, neonate N20.CNhs11109.822-18A429.99
lung, neonate N25.CNhs11119.1359-25C727.11
lung, neonate N30.CNhs11133.1394-42H227.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H214.90
medulla oblongata, adult.CNhs10477.17-12C220.71
medulla oblongata, neonate N30.CNhs11200.1396-42A317.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I719.16
ovary, embryo E18.CNhs11040.505-44H716.03
ovary, neonate N00.CNhs11217.1299-22I433.39
oviduct, adult pregnant day01.CNhs10500.988-6G617.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G841.53
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C75.30
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B99.58
pituitary gland, embryo E16.CNhs11036.449-43F610.17
pituitary gland, embryo E17.CNhs11039.1265-44F511.35
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C317.31
skin, neonate N00.CNhs11124.650-25G416.15
skin, neonate N03.CNhs11215.662-22H320.20
skin, neonate N06.CNhs11097.693-20I518.26
skin, neonate N10.CNhs11108.762-6C412.31
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C926.89
spleen, adult.CNhs10465.25-2G26.15
spleen, embryo E16.CNhs11035.461-43C110.94
spleen, embryo E18.CNhs11011.1271-21F27.96
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.54
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E310.76
stomach, embryo E15.CNhs10603.1252-16G814.64
stomach, embryo E16.CNhs11022.459-17D413.82
stomach, embryo E17.CNhs11006.1035-18D514.43
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B817.80
stomach, neonate N07.CNhs11210.718-18A926.70
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I110.76
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F57.77
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I59.17
testis, embryo E18.CNhs11027.503-18G510.81
testis, neonate N00.CNhs11189.1300-22B712.56
testis, neonate N07.CNhs11222.726-26I415.62
testis, neonate N10.CNhs11204.763-44D99.44
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C56.24
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G46.56
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D35.64
thymus, neonate N10.CNhs11194.748-24E45.04
thymus, neonate N20.CNhs11186.820-7A25.17
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B419.50
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E436.90
uterus, adult pregnant day19.CNhs10497.590-15F511.45
uterus, adult.CNhs10509.92-27E514.10
vagina, adult.CNhs10502.89-27D520.36
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C912.37
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D210.94
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.94
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.63
whole body, embryo E17.5.CNhs10513.490-9F915.82
whole body, embryo E17.CNhs10517.475-3I516.74
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C214.40
whole body, neonate N01.CNhs10576.659-23C612.82
whole body, neonate N06.CNhs10515.692-21D121.84
whole body, neonate N10.CNhs10518.761-6B415.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.60e-1392
cardiovascular system4.86e-1323
circulatory system4.86e-1323
anatomical conduit1.08e-11122
tube7.30e-11114
primary circulatory organ3.50e-1018
heart3.50e-1018
primitive heart tube3.50e-1018
primary heart field3.50e-1018
anterior lateral plate mesoderm3.50e-1018
heart tube3.50e-1018
heart primordium3.50e-1018
cardiac mesoderm3.50e-1018
cardiogenic plate3.50e-1018
heart rudiment3.50e-1018
splanchnic layer of lateral plate mesoderm1.39e-0733
ectoderm-derived structure4.30e-0795
ectoderm4.30e-0795
presumptive ectoderm4.30e-0795
brain grey matter4.95e-0729
regional part of telencephalon4.95e-0729
telencephalon4.95e-0729
regional part of nervous system5.31e-0754
central nervous system5.92e-0773
anterior neural tube7.67e-0740







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