FFCP PHASE1:Mm9::chr2:125860703..125860716,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14178|HGNC=|UniProt=P36363,Q544I6|association_with_transcript=0bp_to_ENSMUST00000110442,uc008mdj.2_5end|description=CAGE_peak_9_at_Fgf7_5end|id=chr2:125860703..125860716,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,5.70e-30,3;CL:0000359,5.70e-30,3;CL:0002539,5.70e-30,3;CL:0000514,5.70e-30,3;CL:0000217,1.59e-20,2;CL:0000328,1.59e-20,2;CL:0002573,1.59e-20,2;CL:0002376,1.59e-20,2;CL:0000218,1.59e-20,2;CL:0000692,1.59e-20,2;CL:0002377,1.59e-20,2;CL:0002375,1.59e-20,2;CL:0000680,2.24e-15,6;CL:0000187,2.24e-15,6;CL:0000056,2.24e-15,6;CL:0000215,4.93e-14,3;CL:0000222,2.80e-13,7;CL:0000355,1.79e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!7.74e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.70e-30,3;UBERON:0004237,5.70e-30,3;UBERON:0004695,5.70e-30,3;UBERON:0002111,5.70e-30,3;UBERON:0004178,5.70e-30,3;UBERON:0000947,1.10e-22,4;UBERON:0001637,1.10e-22,4;UBERON:0004573,1.10e-22,4;UBERON:0003509,1.10e-22,4;UBERON:0004571,1.10e-22,4;UBERON:0010191,1.10e-22,4;UBERON:0004572,1.10e-22,4;UBERON:0000055,2.64e-18,5;UBERON:0007500,2.64e-18,5;UBERON:0001981,2.64e-18,5;UBERON:0002049,2.64e-18,5;UBERON:0007798,2.64e-18,5;UBERON:0004537,2.64e-18,5;UBERON:0006965,2.64e-18,5;UBERON:0001134,1.79e-10,9;UBERON:0002036,1.79e-10,9;UBERON:0002385,1.79e-10,9;UBERON:0000486,1.79e-10,9;UBERON:0007503,1.79e-10,9;UBERON:0001015,1.79e-10,9;UBERON:0002329,1.79e-10,9;UBERON:0003082,1.79e-10,9;UBERON:0003059,1.79e-10,9;UBERON:0007282,1.79e-10,9;UBERON:0004290,1.79e-10,9;UBERON:0009618,1.79e-10,9;UBERON:0000383,1.73e-09,10;UBERON:0007524,1.11e-08,11;UBERON:0003077,1.11e-08,11;UBERON:0007285,1.11e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.73717714292689,1.46837401729345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,1.06016670666458,6.57472572929034,0,0,0,0,0,0,0,2.38602451609281,1.03914401841148,1.41335829804136,0.281686839553361,5.13305909657271,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0,0.586058432961016,0.983609672260053,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.588795680537589,0.685738504770831,0.177475806159338,0,0,0.282328141245992,0.25384382367503,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.463735671240843|short_description=p9@Fgf7}} | ||
|EntrezGene=14178 | |||
|HGNC= | |||
|UniProt=P36363,Q544I6 | |||
|association_with_transcript=0bp_to_ENSMUST00000110442,uc008mdj.2_5end | |||
|description=CAGE_peak_9_at_Fgf7_5end | |||
|id=chr2:125860703..125860716,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.70e-30,3;CL:0000359,5.70e-30,3;CL:0002539,5.70e-30,3;CL:0000514,5.70e-30,3;CL:0000217,1.59e-20,2;CL:0000328,1.59e-20,2;CL:0002573,1.59e-20,2;CL:0002376,1.59e-20,2;CL:0000218,1.59e-20,2;CL:0000692,1.59e-20,2;CL:0002377,1.59e-20,2;CL:0002375,1.59e-20,2;CL:0000680,2.24e-15,6;CL:0000187,2.24e-15,6;CL:0000056,2.24e-15,6;CL:0000215,4.93e-14,3;CL:0000222,2.80e-13,7;CL:0000355,1.79e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!7.74e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.70e-30,3;UBERON:0004237,5.70e-30,3;UBERON:0004695,5.70e-30,3;UBERON:0002111,5.70e-30,3;UBERON:0004178,5.70e-30,3;UBERON:0000947,1.10e-22,4;UBERON:0001637,1.10e-22,4;UBERON:0004573,1.10e-22,4;UBERON:0003509,1.10e-22,4;UBERON:0004571,1.10e-22,4;UBERON:0010191,1.10e-22,4;UBERON:0004572,1.10e-22,4;UBERON:0000055,2.64e-18,5;UBERON:0007500,2.64e-18,5;UBERON:0001981,2.64e-18,5;UBERON:0002049,2.64e-18,5;UBERON:0007798,2.64e-18,5;UBERON:0004537,2.64e-18,5;UBERON:0006965,2.64e-18,5;UBERON:0001134,1.79e-10,9;UBERON:0002036,1.79e-10,9;UBERON:0002385,1.79e-10,9;UBERON:0000486,1.79e-10,9;UBERON:0007503,1.79e-10,9;UBERON:0001015,1.79e-10,9;UBERON:0002329,1.79e-10,9;UBERON:0003082,1.79e-10,9;UBERON:0003059,1.79e-10,9;UBERON:0007282,1.79e-10,9;UBERON:0004290,1.79e-10,9;UBERON:0009618,1.79e-10,9;UBERON:0000383,1.73e-09,10;UBERON:0007524,1.11e-08,11;UBERON:0003077,1.11e-08,11;UBERON:0007285,1.11e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.73717714292689,1.46837401729345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,1.06016670666458,6.57472572929034,0,0,0,0,0,0,0,2.38602451609281,1.03914401841148,1.41335829804136,0.281686839553361,5.13305909657271,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0,0.586058432961016,0.983609672260053,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.588795680537589,0.685738504770831,0.177475806159338,0,0,0.282328141245992,0.25384382367503,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p9@Fgf7 | |||
}} |
Revision as of 21:56, 13 September 2013
Short description: | p9@Fgf7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Fgf7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000110442, uc008mdj.2_5end |
EntrezGene: | Fgf7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.70e-30 | 3 |
vascular associated smooth muscle cell | 5.70e-30 | 3 |
aortic smooth muscle cell | 5.70e-30 | 3 |
smooth muscle myoblast | 5.70e-30 | 3 |
insulating cell | 1.59e-20 | 2 |
myelin accumulating cell | 1.59e-20 | 2 |
Schwann cell | 1.59e-20 | 2 |
non-myelinating Schwann cell | 1.59e-20 | 2 |
myelinating Schwann cell;;Schwann cell | 1.59e-20 | 2 |
terminal Schwann cell | 1.59e-20 | 2 |
immature Schwann cell | 1.59e-20 | 2 |
Schwann cell precursor | 1.59e-20 | 2 |
muscle precursor cell | 2.24e-15 | 6 |
muscle cell | 2.24e-15 | 6 |
myoblast | 2.24e-15 | 6 |
barrier cell | 4.93e-14 | 3 |
mesodermal cell | 2.80e-13 | 7 |
multi-potent skeletal muscle stem cell | 1.79e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.70e-30 | 3 |
blood vessel smooth muscle | 5.70e-30 | 3 |
arterial system smooth muscle | 5.70e-30 | 3 |
artery smooth muscle tissue | 5.70e-30 | 3 |
aorta smooth muscle tissue | 5.70e-30 | 3 |
aorta | 1.10e-22 | 4 |
artery | 1.10e-22 | 4 |
systemic artery | 1.10e-22 | 4 |
arterial blood vessel | 1.10e-22 | 4 |
systemic arterial system | 1.10e-22 | 4 |
aortic system | 1.10e-22 | 4 |
arterial system | 1.10e-22 | 4 |
vessel | 2.64e-18 | 5 |
epithelial tube open at both ends | 2.64e-18 | 5 |
blood vessel | 2.64e-18 | 5 |
vasculature | 2.64e-18 | 5 |
vascular system | 2.64e-18 | 5 |
blood vasculature | 2.64e-18 | 5 |
vascular cord | 2.64e-18 | 5 |
skeletal muscle tissue | 1.79e-10 | 9 |
striated muscle tissue | 1.79e-10 | 9 |
muscle tissue | 1.79e-10 | 9 |
multilaminar epithelium | 1.79e-10 | 9 |
epithelial vesicle | 1.79e-10 | 9 |
musculature | 1.79e-10 | 9 |
somite | 1.79e-10 | 9 |
myotome | 1.79e-10 | 9 |
presomitic mesoderm | 1.79e-10 | 9 |
presumptive segmental plate | 1.79e-10 | 9 |
dermomyotome | 1.79e-10 | 9 |
trunk paraxial mesoderm | 1.79e-10 | 9 |
musculature of body | 1.73e-09 | 10 |
dense mesenchyme tissue | 1.11e-08 | 11 |
paraxial mesoderm | 1.11e-08 | 11 |
presumptive paraxial mesoderm | 1.11e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.