FFCP PHASE1:Hg19::chr7:106101158..106101197,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C373|description=CAGE_peak_at_chr7:106101158..106101197,-|id=chr7:106101158..106101197,-|ontology_enrichment_celltype=CL:0002057!5.19e-23!42;CL:0000860!3.43e-21!45;CL:0000557!7.56e-15!71;CL:0002009!7.88e-15!65;CL:0002194!1.19e-13!63;CL:0000576!1.19e-13!63;CL:0000040!1.19e-13!63;CL:0000559!1.19e-13!63;CL:0000839!1.92e-13!70;CL:0000766!4.67e-12!76;CL:0000763!7.73e-08!112;CL:0000049!7.73e-08!112|ontology_enrichment_celltype_v019=CL:0000860;6.98e-33;33!CL:0002057;6.98e-33;33!CL:0000473;7.14e-22;39!CL:0000234;7.14e-22;39!CL:0000576;1.53e-17;48!CL:0002535;3.43e-09;2!CL:0000766;8.85e-08;69|ontology_enrichment_celltype_v019_2=CL:0000860,1.57e-28,42;CL:0002057,1.57e-28,42;CL:0000473,6.95e-25,48;CL:0000234,6.95e-25,48;CL:0002194,9.02e-20,59;CL:0000576,9.02e-20,59;CL:0000040,9.02e-20,59;CL:0000559,9.02e-20,59;CL:0002009,4.13e-19,61;CL:0000839,1.25e-17,66;CL:0000557,2.32e-17,67;CL:0000766,4.03e-16,72;CL:0000763,1.56e-10,108;CL:0000049,1.56e-10,108;CL:0002087,7.58e-10,115;CL:0002031,2.10e-09,120;CL:0002535,3.43e-09,2;CL:0000738,3.34e-08,136;CL:0002032,8.51e-07,161;CL:0000837,8.51e-07,161|ontology_enrichment_development_v019=CL:0002057;3.75e-21;42!UBERON:0008814;4.70e-09;2!UBERON:0010056;4.70e-09;2|ontology_enrichment_disease=DOID:1749!1.75e-09!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.10e-12!80;UBERON:0001474!1.71e-11!86;UBERON:0004765!2.36e-10!101;UBERON:0001434!2.36e-10!101;UBERON:0002390!5.11e-09!102;UBERON:0003061!5.11e-09!102;UBERON:0002405!1.83e-08!115;UBERON:0002193!7.73e-08!112|ontology_enrichment_uberon_v019=UBERON:0006955;3.43e-09;2!UBERON:0004801;3.43e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-15,76;UBERON:0001474,4.36e-14,82;UBERON:0004765,8.86e-13,90;UBERON:0002405,2.40e-12,93;UBERON:0002390,1.11e-11,98;UBERON:0003061,1.11e-11,98;UBERON:0001434,1.96e-11,100;UBERON:0002193,1.56e-10,108;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,6.32923263108731,2.0492856522328,4.96612682766029,0,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0,0.56738522469114,1.24564449799115,2.51248665256743,1.5644487552606,6.08128765174327,0,1.10483290796269,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91419068741876,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979923974143776,21.0683279924574,0,0,0,0,0,0,0,0,0,0,0,0,0.64127056201227,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,2.45076461410769,0.983617892129413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,3.46576998451015,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.407016343054873,0,0,0,0,0,0,0,0,0|short_description=p@chr7:106101158..106101197,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_at_chr7:106101158..106101197,- | |||
|id=chr7:106101158..106101197,- | |||
|ontology_enrichment_celltype=CL:0002057!5.19e-23!42;CL:0000860!3.43e-21!45;CL:0000557!7.56e-15!71;CL:0002009!7.88e-15!65;CL:0002194!1.19e-13!63;CL:0000576!1.19e-13!63;CL:0000040!1.19e-13!63;CL:0000559!1.19e-13!63;CL:0000839!1.92e-13!70;CL:0000766!4.67e-12!76;CL:0000763!7.73e-08!112;CL:0000049!7.73e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.98e-33;33!CL:0002057;6.98e-33;33!CL:0000473;7.14e-22;39!CL:0000234;7.14e-22;39!CL:0000576;1.53e-17;48!CL:0002535;3.43e-09;2!CL:0000766;8.85e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.57e-28,42;CL:0002057,1.57e-28,42;CL:0000473,6.95e-25,48;CL:0000234,6.95e-25,48;CL:0002194,9.02e-20,59;CL:0000576,9.02e-20,59;CL:0000040,9.02e-20,59;CL:0000559,9.02e-20,59;CL:0002009,4.13e-19,61;CL:0000839,1.25e-17,66;CL:0000557,2.32e-17,67;CL:0000766,4.03e-16,72;CL:0000763,1.56e-10,108;CL:0000049,1.56e-10,108;CL:0002087,7.58e-10,115;CL:0002031,2.10e-09,120;CL:0002535,3.43e-09,2;CL:0000738,3.34e-08,136;CL:0002032,8.51e-07,161;CL:0000837,8.51e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-21;42!UBERON:0008814;4.70e-09;2!UBERON:0010056;4.70e-09;2 | |||
|ontology_enrichment_disease=DOID:1749!1.75e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-12!80;UBERON:0001474!1.71e-11!86;UBERON:0004765!2.36e-10!101;UBERON:0001434!2.36e-10!101;UBERON:0002390!5.11e-09!102;UBERON:0003061!5.11e-09!102;UBERON:0002405!1.83e-08!115;UBERON:0002193!7.73e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.43e-09;2!UBERON:0004801;3.43e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-15,76;UBERON:0001474,4.36e-14,82;UBERON:0004765,8.86e-13,90;UBERON:0002405,2.40e-12,93;UBERON:0002390,1.11e-11,98;UBERON:0003061,1.11e-11,98;UBERON:0001434,1.96e-11,100;UBERON:0002193,1.56e-10,108;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,6.32923263108731,2.0492856522328,4.96612682766029,0,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0,0.56738522469114,1.24564449799115,2.51248665256743,1.5644487552606,6.08128765174327,0,1.10483290796269,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91419068741876,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979923974143776,21.0683279924574,0,0,0,0,0,0,0,0,0,0,0,0,0.64127056201227,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,2.45076461410769,0.983617892129413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,3.46576998451015,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:106101158..106101197,- | |||
}} |
Revision as of 22:37, 13 September 2013
Short description: | p@chr7:106101158..106101197, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:106101158..106101197, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.57e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-28 | 42 |
defensive cell | 6.95e-25 | 48 |
phagocyte | 6.95e-25 | 48 |
monopoietic cell | 9.02e-20 | 59 |
monocyte | 9.02e-20 | 59 |
monoblast | 9.02e-20 | 59 |
promonocyte | 9.02e-20 | 59 |
macrophage dendritic cell progenitor | 4.13e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.25e-17 | 66 |
granulocyte monocyte progenitor cell | 2.32e-17 | 67 |
myeloid leukocyte | 4.03e-16 | 72 |
myeloid cell | 1.56e-10 | 108 |
common myeloid progenitor | 1.56e-10 | 108 |
nongranular leukocyte | 7.58e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.10e-09 | 120 |
epithelial cell of cervix | 3.43e-09 | 2 |
leukocyte | 3.34e-08 | 136 |
hematopoietic oligopotent progenitor cell | 8.51e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.51e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.03e-15 | 76 |
bone element | 4.36e-14 | 82 |
skeletal element | 8.86e-13 | 90 |
immune system | 2.40e-12 | 93 |
hematopoietic system | 1.11e-11 | 98 |
blood island | 1.11e-11 | 98 |
skeletal system | 1.96e-11 | 100 |
hemolymphoid system | 1.56e-10 | 108 |
uterine epithelium | 3.43e-09 | 2 |
cervix epithelium | 3.43e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.