FFCP PHASE1:Mm9::chr2:26300630..26300636,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227648|HGNC=|UniProt=|association_with_transcript=83bp_to_ENSMUST00000155252_5end|description=CAGE_peak_3_at_Sec16a_5end|id=chr2:26300630..26300636,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000624,1.45e-18,8;CL:0000791,1.68e-16,9;CL:0000789,1.68e-16,9;CL:0002420,1.68e-16,9;CL:0002419,1.68e-16,9;CL:0000790,1.68e-16,9;CL:0000893,4.28e-16,6;CL:0002489,4.28e-16,6;CL:0000898,4.28e-16,6;CL:0000809,4.28e-16,6;CL:0000810,4.28e-16,6;CL:0000895,4.28e-16,6;CL:0000808,4.28e-16,6;CL:0000894,4.28e-16,6;CL:0000806,4.28e-16,6;CL:0000807,4.28e-16,6;CL:0000805,4.28e-16,6;CL:0002425,4.28e-16,6;CL:0002436,4.28e-16,6;CL:0002427,4.28e-16,6;CL:0002428,4.28e-16,6;CL:0002429,4.28e-16,6;CL:0002433,4.28e-16,6;CL:0002431,4.28e-16,6;CL:0002432,4.28e-16,6;CL:0000084,1.69e-13,11;CL:0000827,1.69e-13,11;CL:0000838,2.28e-12,12;CL:0000542,2.06e-11,13;CL:0000051,2.06e-11,13;CL:0000738,1.05e-08,17;CL:0002087,1.05e-08,17;CL:0000213,1.83e-07,1;CL:0002078,1.83e-07,1;CL:0000115,1.83e-07,1;CL:0002262,1.83e-07,1;CL:1000398,1.83e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.12e-08,24;UBERON:0002394,1.83e-07,1;UBERON:0001281,1.83e-07,1;UBERON:0000353,1.83e-07,1;UBERON:0003497,1.83e-07,1;UBERON:0003909,1.83e-07,1;UBERON:0003928,1.83e-07,1;UBERON:0003835,1.83e-07,1;UBERON:0003513,1.83e-07,1;UBERON:0001280,1.83e-07,1;UBERON:0004647,1.83e-07,1;UBERON:0002294,1.83e-07,1;UBERON:0001173,1.83e-07,1;UBERON:0004912,1.83e-07,1;UBERON:0005171,1.83e-07,1;UBERON:0001044,2.79e-07,1;UBERON:0001736,2.79e-07,1;UBERON:0003293,2.79e-07,1;UBERON:0003294,2.79e-07,1;UBERON:0001829,2.79e-07,1;UBERON:0010047,2.79e-07,1;UBERON:0000167,2.79e-07,1;UBERON:0006298,2.79e-07,1|phase1_expression=0.480446541314382,0,0.454999239389536,0.30246421130683,0.500895729946347,0,0.233612640595526,0.774739940649458,2.53419699873,5.61754863172784,0.171217968225505,0.0797721589953364,1.19840510951844,1.31130603628496,0,0.404950534779652,0.699561878128147,0.473193248037357,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.816677425049476,0.418531630736908,0.7813353445238,1.0470474879476,4.70585190424811,1.36609096991689,0.971020706062307,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0,0.279972843250725,0,0.335565212115473,2.17608642603403,0.336093799142464,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0.0958454710182364,0.919218786610021,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.377857800533928,3.76823835312181,0,0,0.539703191637817,0,1.34408066129201,0.280888840263504,0,0,0,0.14084341977668,0,0,7.11066703153331,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.741584903203122,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,0.11981512450592,0.599902730993408,0.381210681219194,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.324482526135515,0.101839363850316,0.622034853050465,1.26361379216837,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.351902248327898,0,0,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0.243206428637567,0,0,0.268412837520744,0,0.308713837137853,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.585400943573396,0,0.221464689648775,0.318909537314974,0,0,0.289298117163023,0,0,0.491764273019036,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.704015124191131,0.21183207086382,0.441056796109924,0.32977250588296,0,0.120625849856312,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0.559805809294632,0.552799895217695,0,0,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.247960367176008,0,0,1.86401793926078,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0,0.419437377702843,0.483168241652012,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0.628839487883947,0,0,0,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0,0.231867835620421|short_description=p3@Sec16a}} | ||
|EntrezGene=227648 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=83bp_to_ENSMUST00000155252_5end | |||
|description=CAGE_peak_3_at_Sec16a_5end | |||
|id=chr2:26300630..26300636,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.45e-18,8;CL:0000791,1.68e-16,9;CL:0000789,1.68e-16,9;CL:0002420,1.68e-16,9;CL:0002419,1.68e-16,9;CL:0000790,1.68e-16,9;CL:0000893,4.28e-16,6;CL:0002489,4.28e-16,6;CL:0000898,4.28e-16,6;CL:0000809,4.28e-16,6;CL:0000810,4.28e-16,6;CL:0000895,4.28e-16,6;CL:0000808,4.28e-16,6;CL:0000894,4.28e-16,6;CL:0000806,4.28e-16,6;CL:0000807,4.28e-16,6;CL:0000805,4.28e-16,6;CL:0002425,4.28e-16,6;CL:0002436,4.28e-16,6;CL:0002427,4.28e-16,6;CL:0002428,4.28e-16,6;CL:0002429,4.28e-16,6;CL:0002433,4.28e-16,6;CL:0002431,4.28e-16,6;CL:0002432,4.28e-16,6;CL:0000084,1.69e-13,11;CL:0000827,1.69e-13,11;CL:0000838,2.28e-12,12;CL:0000542,2.06e-11,13;CL:0000051,2.06e-11,13;CL:0000738,1.05e-08,17;CL:0002087,1.05e-08,17;CL:0000213,1.83e-07,1;CL:0002078,1.83e-07,1;CL:0000115,1.83e-07,1;CL:0002262,1.83e-07,1;CL:1000398,1.83e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.12e-08,24;UBERON:0002394,1.83e-07,1;UBERON:0001281,1.83e-07,1;UBERON:0000353,1.83e-07,1;UBERON:0003497,1.83e-07,1;UBERON:0003909,1.83e-07,1;UBERON:0003928,1.83e-07,1;UBERON:0003835,1.83e-07,1;UBERON:0003513,1.83e-07,1;UBERON:0001280,1.83e-07,1;UBERON:0004647,1.83e-07,1;UBERON:0002294,1.83e-07,1;UBERON:0001173,1.83e-07,1;UBERON:0004912,1.83e-07,1;UBERON:0005171,1.83e-07,1;UBERON:0001044,2.79e-07,1;UBERON:0001736,2.79e-07,1;UBERON:0003293,2.79e-07,1;UBERON:0003294,2.79e-07,1;UBERON:0001829,2.79e-07,1;UBERON:0010047,2.79e-07,1;UBERON:0000167,2.79e-07,1;UBERON:0006298,2.79e-07,1 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0.30246421130683,0.500895729946347,0,0.233612640595526,0.774739940649458,2.53419699873,5.61754863172784,0.171217968225505,0.0797721589953364,1.19840510951844,1.31130603628496,0,0.404950534779652,0.699561878128147,0.473193248037357,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.816677425049476,0.418531630736908,0.7813353445238,1.0470474879476,4.70585190424811,1.36609096991689,0.971020706062307,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0,0.279972843250725,0,0.335565212115473,2.17608642603403,0.336093799142464,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0.0958454710182364,0.919218786610021,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.377857800533928,3.76823835312181,0,0,0.539703191637817,0,1.34408066129201,0.280888840263504,0,0,0,0.14084341977668,0,0,7.11066703153331,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.741584903203122,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,0.11981512450592,0.599902730993408,0.381210681219194,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.324482526135515,0.101839363850316,0.622034853050465,1.26361379216837,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.351902248327898,0,0,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0.243206428637567,0,0,0.268412837520744,0,0.308713837137853,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.585400943573396,0,0.221464689648775,0.318909537314974,0,0,0.289298117163023,0,0,0.491764273019036,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.704015124191131,0.21183207086382,0.441056796109924,0.32977250588296,0,0.120625849856312,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0.559805809294632,0.552799895217695,0,0,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.247960367176008,0,0,1.86401793926078,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0,0.419437377702843,0.483168241652012,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0.628839487883947,0,0,0,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p3@Sec16a | |||
}} |
Revision as of 23:31, 13 September 2013
Short description: | p3@Sec16a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sec16a_5end |
Coexpression cluster: | NA |
Association with transcript: | 83bp_to_ENSMUST00000155252_5end |
EntrezGene: | Sec16a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of gut | 1.12e-08 | 24 |
bile duct | 1.83e-07 | 1 |
hepatic sinusoid | 1.83e-07 | 1 |
parenchyma | 1.83e-07 | 1 |
abdomen blood vessel | 1.83e-07 | 1 |
sinusoid | 1.83e-07 | 1 |
digestive system duct | 1.83e-07 | 1 |
abdominal segment blood vessel | 1.83e-07 | 1 |
trunk blood vessel | 1.83e-07 | 1 |
liver parenchyma | 1.83e-07 | 1 |
liver lobule | 1.83e-07 | 1 |
biliary system | 1.83e-07 | 1 |
biliary tree | 1.83e-07 | 1 |
biliary bud | 1.83e-07 | 1 |
hepatic duct | 1.83e-07 | 1 |
saliva-secreting gland | 2.79e-07 | 1 |
submandibular gland | 2.79e-07 | 1 |
gland of oral region | 2.79e-07 | 1 |
gland of foregut | 2.79e-07 | 1 |
major salivary gland | 2.79e-07 | 1 |
oral gland | 2.79e-07 | 1 |
oral cavity | 2.79e-07 | 1 |
submandibular gland primordium | 2.79e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.