FFCP PHASE1:Hg19::chr7:8302207..8302231,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3382|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5343|TSSclassifier=S|UniProt=E7ENI6|association_with_transcript=10bp_to_ENST00000407906_5end|description=CAGE_peak_3_at_ICA1_5end|id=chr7:8302207..8302231,-|ontology_enrichment_celltype=CL:0000066!2.69e-08!254;CL:0000039!6.43e-08!7;CL:0000586!6.43e-08!7;CL:0002076!1.34e-07!43|ontology_enrichment_celltype_v019=CL:0000039;1.68e-09;7!CL:0000586;1.68e-09;7!CL:0002231;3.73e-08;3|ontology_enrichment_celltype_v019_2=CL:0000039,2.00e-09,7;CL:0000586,2.00e-09,7;CL:0000066,2.14e-08,253;CL:0002231,4.32e-08,3|ontology_enrichment_development_v019=UBERON:0009117;5.06e-09;10!UBERON:0005564;5.06e-09;10|ontology_enrichment_disease=DOID:305!1.07e-14!106;DOID:0050687!4.55e-11!143;DOID:299!5.26e-10!25|ontology_enrichment_disease_v019=DOID:299;4.65e-18;25!DOID:5093;1.26e-11;4!DOID:1612;1.26e-11;4!DOID:305;2.11e-09;106!DOID:3119;8.39e-09;14!DOID:0050615;1.40e-07;16|ontology_enrichment_disease_v019_2=DOID:305,4.44e-20,106;DOID:299,2.76e-18,25;DOID:0050687,4.34e-17,143;DOID:5093,1.34e-11,4;DOID:1612,1.34e-11,4;DOID:3119,5.88e-09,14;DOID:162,9.61e-09,235;DOID:14566,2.31e-08,239;DOID:0050615,1.78e-07,16|ontology_enrichment_uberon=UBERON:0007023!5.35e-23!115;UBERON:0001049!1.20e-13!57;UBERON:0005068!1.20e-13!57;UBERON:0006241!1.20e-13!57;UBERON:0007135!1.20e-13!57;UBERON:0002616!8.19e-13!59;UBERON:0004119!6.13e-12!169;UBERON:0000925!6.13e-12!169;UBERON:0006595!6.13e-12!169;UBERON:0003080!6.49e-12!42;UBERON:0004921!7.89e-12!129;UBERON:0004185!7.89e-12!129;UBERON:0000464!1.53e-11!104;UBERON:0002780!2.72e-11!41;UBERON:0001890!2.72e-11!41;UBERON:0006240!2.72e-11!41;UBERON:0001007!3.34e-11!155;UBERON:0001555!3.34e-11!155;UBERON:0007026!3.34e-11!155;UBERON:0002020!4.05e-11!34;UBERON:0003528!4.05e-11!34;UBERON:0001869!4.19e-11!32;UBERON:0001893!6.45e-11!34;UBERON:0000481!1.48e-10!347;UBERON:0000062!2.27e-10!511;UBERON:0002791!2.70e-10!33;UBERON:0000955!9.43e-10!69;UBERON:0006238!9.43e-10!69;UBERON:0000466!1.25e-09!126;UBERON:0000077!2.64e-09!130;UBERON:0003135!2.81e-09!11;UBERON:0001017!8.40e-09!82;UBERON:0003101!1.61e-08!22;UBERON:0000079!1.61e-08!22;UBERON:0000073!1.64e-08!94;UBERON:0001016!1.64e-08!94;UBERON:0000064!1.69e-08!219;UBERON:0005743!1.79e-08!86;UBERON:0000922!1.85e-08!612;UBERON:0005153!2.54e-08!37;UBERON:0004111!3.04e-08!241;UBERON:0005409!4.68e-08!35;UBERON:0001950!5.43e-08!20;UBERON:0002619!6.63e-08!22;UBERON:0000468!1.08e-07!659;UBERON:0002048!1.98e-07!22;UBERON:0000117!1.98e-07!22;UBERON:0000171!1.98e-07!22;UBERON:0000170!1.98e-07!22;UBERON:0005597!1.98e-07!22;UBERON:0000118!1.98e-07!22;UBERON:0000160!2.72e-07!27;UBERON:0000475!3.75e-07!365;UBERON:0003075!3.95e-07!86;UBERON:0007284!3.95e-07!86;UBERON:0005178!4.25e-07!34;UBERON:0002224!4.25e-07!34;UBERON:0000473!4.96e-07!8;UBERON:0000033!6.70e-07!123;UBERON:0003056!6.71e-07!61;UBERON:0000153!6.90e-07!129;UBERON:0007811!6.90e-07!129;UBERON:0002308!7.47e-07!9;UBERON:0000125!7.47e-07!9;UBERON:0005181!9.66e-07!35;UBERON:0005156!9.77e-07!59;UBERON:0000990!9.77e-07!59|ontology_enrichment_uberon_v019=UBERON:0003101;6.31e-12;22!UBERON:0000079;6.31e-12;22!UBERON:0000473;1.84e-11;8!UBERON:0003135;7.44e-11;11!UBERON:0000058;7.07e-09;10!UBERON:0005383;1.78e-08;3!UBERON:0005382;1.78e-08;3!UBERON:0004921;4.43e-08;33!UBERON:0005409;1.17e-07;22!UBERON:0001052;6.97e-07;4!UBERON:0003133;8.28e-07;44!UBERON:0000007;8.92e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003101,1.07e-11,22;UBERON:0000079,1.07e-11,22;UBERON:0000473,2.51e-11,8;UBERON:0003135,1.23e-10,11;UBERON:0005383,6.17e-09,3;UBERON:0005382,6.17e-09,3;UBERON:0005156,1.18e-08,59;UBERON:0000990,1.18e-08,59;UBERON:0011216,1.95e-08,223;UBERON:0004921,1.87e-07,118;UBERON:0001052,5.29e-07,4;UBERON:0000369,8.74e-07,4;UBERON:0002435,8.74e-07,4;UBERON:0000204,8.74e-07,4;UBERON:0010082,8.74e-07,4;UBERON:0005409,8.99e-07,25;UBERON:0000007,9.62e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,1.34171076742555,0.530119073285941,1.16193942869518,0.621966330092223,1.51392510525377,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,1.59884970106048,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,2.37061319387782,2.57545848628462,0,0.234004265139238,0,0.93733833986777,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5343 | |||
|TSSclassifier=S | |||
|UniProt=E7ENI6 | |||
|association_with_transcript=10bp_to_ENST00000407906_5end | |||
|description=CAGE_peak_3_at_ICA1_5end | |||
|id=chr7:8302207..8302231,- | |||
|ontology_enrichment_celltype=CL:0000066!2.69e-08!254;CL:0000039!6.43e-08!7;CL:0000586!6.43e-08!7;CL:0002076!1.34e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.68e-09;7!CL:0000586;1.68e-09;7!CL:0002231;3.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.00e-09,7;CL:0000586,2.00e-09,7;CL:0000066,2.14e-08,253;CL:0002231,4.32e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.06e-09;10!UBERON:0005564;5.06e-09;10 | |||
|ontology_enrichment_disease=DOID:305!1.07e-14!106;DOID:0050687!4.55e-11!143;DOID:299!5.26e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.65e-18;25!DOID:5093;1.26e-11;4!DOID:1612;1.26e-11;4!DOID:305;2.11e-09;106!DOID:3119;8.39e-09;14!DOID:0050615;1.40e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.44e-20,106;DOID:299,2.76e-18,25;DOID:0050687,4.34e-17,143;DOID:5093,1.34e-11,4;DOID:1612,1.34e-11,4;DOID:3119,5.88e-09,14;DOID:162,9.61e-09,235;DOID:14566,2.31e-08,239;DOID:0050615,1.78e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.35e-23!115;UBERON:0001049!1.20e-13!57;UBERON:0005068!1.20e-13!57;UBERON:0006241!1.20e-13!57;UBERON:0007135!1.20e-13!57;UBERON:0002616!8.19e-13!59;UBERON:0004119!6.13e-12!169;UBERON:0000925!6.13e-12!169;UBERON:0006595!6.13e-12!169;UBERON:0003080!6.49e-12!42;UBERON:0004921!7.89e-12!129;UBERON:0004185!7.89e-12!129;UBERON:0000464!1.53e-11!104;UBERON:0002780!2.72e-11!41;UBERON:0001890!2.72e-11!41;UBERON:0006240!2.72e-11!41;UBERON:0001007!3.34e-11!155;UBERON:0001555!3.34e-11!155;UBERON:0007026!3.34e-11!155;UBERON:0002020!4.05e-11!34;UBERON:0003528!4.05e-11!34;UBERON:0001869!4.19e-11!32;UBERON:0001893!6.45e-11!34;UBERON:0000481!1.48e-10!347;UBERON:0000062!2.27e-10!511;UBERON:0002791!2.70e-10!33;UBERON:0000955!9.43e-10!69;UBERON:0006238!9.43e-10!69;UBERON:0000466!1.25e-09!126;UBERON:0000077!2.64e-09!130;UBERON:0003135!2.81e-09!11;UBERON:0001017!8.40e-09!82;UBERON:0003101!1.61e-08!22;UBERON:0000079!1.61e-08!22;UBERON:0000073!1.64e-08!94;UBERON:0001016!1.64e-08!94;UBERON:0000064!1.69e-08!219;UBERON:0005743!1.79e-08!86;UBERON:0000922!1.85e-08!612;UBERON:0005153!2.54e-08!37;UBERON:0004111!3.04e-08!241;UBERON:0005409!4.68e-08!35;UBERON:0001950!5.43e-08!20;UBERON:0002619!6.63e-08!22;UBERON:0000468!1.08e-07!659;UBERON:0002048!1.98e-07!22;UBERON:0000117!1.98e-07!22;UBERON:0000171!1.98e-07!22;UBERON:0000170!1.98e-07!22;UBERON:0005597!1.98e-07!22;UBERON:0000118!1.98e-07!22;UBERON:0000160!2.72e-07!27;UBERON:0000475!3.75e-07!365;UBERON:0003075!3.95e-07!86;UBERON:0007284!3.95e-07!86;UBERON:0005178!4.25e-07!34;UBERON:0002224!4.25e-07!34;UBERON:0000473!4.96e-07!8;UBERON:0000033!6.70e-07!123;UBERON:0003056!6.71e-07!61;UBERON:0000153!6.90e-07!129;UBERON:0007811!6.90e-07!129;UBERON:0002308!7.47e-07!9;UBERON:0000125!7.47e-07!9;UBERON:0005181!9.66e-07!35;UBERON:0005156!9.77e-07!59;UBERON:0000990!9.77e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;6.31e-12;22!UBERON:0000079;6.31e-12;22!UBERON:0000473;1.84e-11;8!UBERON:0003135;7.44e-11;11!UBERON:0000058;7.07e-09;10!UBERON:0005383;1.78e-08;3!UBERON:0005382;1.78e-08;3!UBERON:0004921;4.43e-08;33!UBERON:0005409;1.17e-07;22!UBERON:0001052;6.97e-07;4!UBERON:0003133;8.28e-07;44!UBERON:0000007;8.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,1.07e-11,22;UBERON:0000079,1.07e-11,22;UBERON:0000473,2.51e-11,8;UBERON:0003135,1.23e-10,11;UBERON:0005383,6.17e-09,3;UBERON:0005382,6.17e-09,3;UBERON:0005156,1.18e-08,59;UBERON:0000990,1.18e-08,59;UBERON:0011216,1.95e-08,223;UBERON:0004921,1.87e-07,118;UBERON:0001052,5.29e-07,4;UBERON:0000369,8.74e-07,4;UBERON:0002435,8.74e-07,4;UBERON:0000204,8.74e-07,4;UBERON:0010082,8.74e-07,4;UBERON:0005409,8.99e-07,25;UBERON:0000007,9.62e-07,2 | |||
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| |||
|short_description=p3@ICA1 | |||
}} |
Revision as of 02:14, 14 September 2013
Short description: | p3@ICA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ICA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000407906_5end |
EntrezGene: | ICA1 |
HGNC: | 5343 |
UniProt: | E7ENI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.00e-09 | 7 |
germ cell | 2.00e-09 | 7 |
epithelial cell | 2.14e-08 | 253 |
epithelial cell of prostate | 4.32e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male organism | 1.07e-11 | 22 |
male reproductive system | 1.07e-11 | 22 |
testis | 2.51e-11 | 8 |
male reproductive organ | 1.23e-10 | 11 |
caudate-putamen | 6.17e-09 | 3 |
dorsal striatum | 6.17e-09 | 3 |
reproductive structure | 1.18e-08 | 59 |
reproductive system | 1.18e-08 | 59 |
organ system subdivision | 1.95e-08 | 223 |
subdivision of digestive tract | 1.87e-07 | 118 |
rectum | 5.29e-07 | 4 |
corpus striatum | 8.74e-07 | 4 |
striatum | 8.74e-07 | 4 |
ventral part of telencephalon | 8.74e-07 | 4 |
future corpus striatum | 8.74e-07 | 4 |
gastrointestinal system | 8.99e-07 | 25 |
pituitary gland | 9.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.44e-20 | 106 |
adenocarcinoma | 2.76e-18 | 25 |
cell type cancer | 4.34e-17 | 143 |
thoracic cancer | 1.34e-11 | 4 |
breast cancer | 1.34e-11 | 4 |
gastrointestinal system cancer | 5.88e-09 | 14 |
cancer | 9.61e-09 | 235 |
disease of cellular proliferation | 2.31e-08 | 239 |
respiratory system cancer | 1.78e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.