FFCP PHASE1:Mm9::chr4:133742934..133743005,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70012|HGNC=|MCL_coexpression_id=156|UniProt=Q8C1L6,A2A9K2,Q8BMK0,A2A9K3|association_with_transcript=0bp_to_ENSMUST00000132120,ENSMUST00000137388,ENSMUST00000141384,NM_144527,uc008ved.2,uc008vee.2,uc008vef.2_5end|description=CAGE_peak_1_at_Ccdc21_5end|id=chr4:133742934..133743005,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!9.49e-23!147;UBERON:0005057!1.06e-13!51;UBERON:0000466!3.88e-11!79;UBERON:0000926!6.16e-11!193;UBERON:0004120!6.16e-11!193;UBERON:0006603!6.16e-11!193;UBERON:0002553!7.71e-11!39;UBERON:0003886!8.10e-11!38;UBERON:0001041!1.81e-10!92;UBERON:0002323!1.99e-10!37;UBERON:0004458!1.99e-10!37;UBERON:0004177!7.45e-10!29;UBERON:0000949!9.73e-10!72;UBERON:0000077!1.96e-09!97;UBERON:0002405!3.67e-09!70;UBERON:0002530!1.25e-08!65;UBERON:0003101!3.45e-08!16;UBERON:0000079!3.45e-08!16;UBERON:0003135!8.55e-08!15;UBERON:0002368!1.22e-07!60;UBERON:0000473!2.03e-07!14;UBERON:0003408!2.64e-07!24;UBERON:0002370!2.67e-07!23;UBERON:0000974!2.67e-07!23;UBERON:0004807!2.67e-07!23;UBERON:0005058!2.67e-07!23;UBERON:0003351!2.67e-07!23;UBERON:0009113!2.67e-07!23;UBERON:0003295!2.67e-07!23;UBERON:0009722!2.67e-07!23;UBERON:0005562!2.67e-07!23;UBERON:0007690!2.67e-07!23;UBERON:0000991!4.35e-07!18;UBERON:0005564!4.35e-07!18;UBERON:0006562!4.79e-07!24;UBERON:0001557!4.79e-07!24;UBERON:0001042!4.79e-07!24;UBERON:0008814!4.79e-07!24;UBERON:0009145!4.79e-07!24;UBERON:0000464!5.19e-07!57;UBERON:0004176!6.12e-07!17;UBERON:0009196!6.12e-07!17;UBERON:0009117!6.12e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001048,5.31e-19,134;UBERON:0002553,7.71e-11,39;UBERON:0003886,8.10e-11,38;UBERON:0002323,1.99e-10,37;UBERON:0004458,1.99e-10,37;UBERON:0004177,7.45e-10,29;UBERON:0005057,7.45e-10,29;UBERON:0000949,9.73e-10,72;UBERON:0002530,1.25e-08,65;UBERON:0001041,2.71e-08,80;UBERON:0003101,3.45e-08,16;UBERON:0000079,3.45e-08,16;UBERON:0003135,8.55e-08,15;UBERON:0002368,1.22e-07,60;UBERON:0007811,1.38e-07,36;UBERON:0000473,2.03e-07,14;UBERON:0000153,2.15e-07,43;UBERON:0003408,2.64e-07,24;UBERON:0002370,2.67e-07,23;UBERON:0000974,2.67e-07,23;UBERON:0004807,2.67e-07,23;UBERON:0005058,2.67e-07,23;UBERON:0003351,2.67e-07,23;UBERON:0009113,2.67e-07,23;UBERON:0003295,2.67e-07,23;UBERON:0009722,2.67e-07,23;UBERON:0005562,2.67e-07,23;UBERON:0007690,2.67e-07,23;UBERON:0000077,2.83e-07,35;UBERON:0000991,4.35e-07,18;UBERON:0005564,4.35e-07,18;UBERON:0006562,4.79e-07,24;UBERON:0001557,4.79e-07,24;UBERON:0001042,4.79e-07,24;UBERON:0008814,4.79e-07,24;UBERON:0009145,4.79e-07,24;UBERON:0004176,6.12e-07,17;UBERON:0009196,6.12e-07,17;UBERON:0009117,6.12e-07,17;UBERON:0000926,7.76e-07,120;UBERON:0004120,7.76e-07,120;UBERON:0006603,7.76e-07,120|phase1_expression=11.0502704502308,2.09385244583617,2.72999543633722,0.60492842261366,2.50447864973174,11.4157904900085,8.41005506143892,11.879345756625,31.8182512062767,31.3646465271471,19.8612843141586,21.9373437237175,14.2096605842901,10.4030278878607,34.9765249906446,45.5569351627108,84.6469872535057,14.8267217718372,15.4939309974485,16.5511964201232,36.0583550240536,22.1418821177974,19.5899841854202,5.11975752938901,5.04700418347774,1.14846392823004,2.58457197695445,4.30942465371778,3.42042155021473,3.02436155711917,7.53883736228036,43.1820857952549,28.2929802288902,63.3926724061755,11.8429164098023,11.470190529736,10.4126371693808,7.53356935326434,7.813353445238,9.94695113550217,3.52938892818609,6.14740936462601,8.25367600152961,3.9028013572429,3.54819259268301,3.48738829107195,3.12956537739216,12.8634842264463,9.00713349211335,7.19390626574849,9.79904951377538,4.31257693094915,15.268217151254,15.2326049822382,18.4851589528355,6.17422646486273,6.5902691185914,3.6097046459421,9.3065571995415,9.52183762689659,13.3104594736298,7.79342423759004,8.00365316500025,3.5995988691256,1.97773272513395,0,6.2916023208865,3.45796474789399,10.7837196800817,9.45041568321835,9.46462326081219,6.56997264128748,10.6016899656774,10.656699531701,12.6516021744072,11.0306254393203,7.70811166995721,10.9811110753261,5.52983519722476,13.9799464994005,11.9848813119157,12.5019208933622,7.81712397203867,7.87867654044352,8.40390362772456,7.66034322231536,8.11518580554887,12.1159639786445,10.6016670666458,13.6028808192214,9.85539261585705,7.74381489283248,13.599426674155,12.9528765993076,10.3964226791627,11.2006721774334,14.6062196937022,10.5666799998396,5.45550609666024,7.42013106471715,9.01397886570755,12.8326477414318,5.09610479413291,14.2213340630666,8.65964164044856,7.09407623330276,9.60496445528088,12.2176751299394,24.081223179187,12.0238132642508,14.2257967948231,12.1786191324856,11.5307748628029,12.3592565253151,15.6392980490487,8.04266184509923,17.0564527736718,8.09756398751505,31.8459798701955,18.1178871941098,24.7342500675641,28.1227646818429,9.31958806090611,9.36898550436951,14.0329293565015,6.64188343542338,16.4146720573111,17.3971791988088,20.7124470129095,8.53806644607489,11.4375150704657,7.79056983099759,10.2556348913443,8.69432554923124,8.93488591606108,11.5191296778108,12.6280811174392,22.2688477392066,24.0086620511991,10.5220927943237,16.6554166992261,14.2539304748753,17.4660265911189,21.701493768343,20.2748767470957,28.6974733438064,21.8325018224168,22.7658966250334,15.5208954911646,17.0195472151037,13.724187684788,13.1517439456545,14.4584569597311,13.5818344943645,12.7584924572925,16.9179126795719,16.1509033082044,10.5512641917033,21.8805894534606,13.4631752148076,16.1822981386956,19.9868888221726,16.5721314909647,23.0214151144462,19.2833891109223,23.0208605302904,22.2666923161684,19.4998121753173,16.6205448412615,14.7750717671186,11.6739085746032,9.21059920779594,12.953456802172,11.541752013392,11.3556572224629,11.6282211988591,4.62586296177317,5.81791246659797,17.0630600428187,14.8631469990681,14.0465532841082,14.117846723634,14.8993289376063,13.5060194539917,10.9141684155238,6.42325923423642,8.29406189040889,7.95825888164603,7.99352757188393,9.88701349519644,6.48414149624083,8.16479220342906,14.9837641752935,17.2515254040691,5.63538678365402,13.6446389656361,11.2492442557223,10.5905088034381,11.5722862937391,10.1851002105925,10.047918581848,10.1185674415876,21.3445891502747,25.0267658574141,21.8180484575655,26.9834534861824,30.8347384510524,33.2824480458335,29.0273471030819,33.6604480817448,43.9386464560346,26.3578956660558,25.8782771749238,26.7941482321322,26.5232022147376,31.8249386213361,14.8899853223187,26.0519501536218,11.0851914099963,14.7803301180978,20.0446921023692,14.7678224624414,19.4792906079457,15.0755631697634,14.2826184531608,13.8544889979037,15.6058792665129,13.0664166892777,11.4807433433391,8.68475567993411,9.32498902075836,9.69148692496127,4.52373851817817,6.52686820582452,17.7035138286853,15.452457793065,7.38532713943843,8.08760637486202,9.01642199571715,15.1482556322624,11.6738041184015,10.5418460960092,14.4333676480975,10.5146271099123,11.8083297263669,12.1722908239198,14.5731852602962,9.9366991689846,10.6727700045561,16.708708453934,14.7617688616599,16.5601011410547,12.3794089108718,8.57844639457184,22.5666735177937,12.624593080059,10.2790009368015,21.1237689326606,18.8993211443695,23.6725063916824,23.2585463851399,21.0849563096953,16.0423820273125,23.0706833293146,14.7586052004998,21.6584640821192,11.234506989875,19.2665370613502,11.5129228566652,10.9311887866112,12.0591358876746,12.1290795969408,8.06290200950393,9.74287837166718,11.2642419870581,10.3797714723272,24.6991805821557,7.58476763530808,9.84933002845024,11.2785169615651,8.47543642422269,8.53532678674319,10.2018292820448,8.34413859047294,31.6111129476027,16.717336305021,21.6677597022563,47.4688511651821,45.3824836033804,40.0361803111415,15.8079939894285,13.2953879707475,16.5839968565309,5.72802370809068,12.6534397432454,16.6721963044016,12.5286195353289,12.9634743528971,13.7568415160092,13.8910276776365,11.7367907129977,4.4498510137285,8.03612834409116,14.9121435140862,147.687549935258,22.2779653605528,22.9987301735366,54.6407839246774,37.7146684554975,35.1428741020819,24.0582339223796,35.0249795230226,60.6087010780609,149.298986670472,117.516242553209,56.5659905924439,13.7853146397312,17.7689955895151,25.2046396576922,36.8794993075012,47.8822065022848,46.8762253127879,39.7284828099613,53.2093191226738,53.4971782718099,61.5039729334727,60.618801820126,65.135416790503,75.5024788092935,12.6969014824518,27.30427226501,16.776491185972,14.4380770073107,6.37525660306228,12.5747258552292,6.77661009788881,8.1459984050045,20.5644562654499,6.21227026878773,7.36520378411483,9.16632821503035,8.07709957015332,5.48066015816514,12.0863023582352,5.40018000185445,9.45674526770863,5.89085131679466,9.31968561153276,14.6340160093689,19.9512436700516,14.6830900948555,12.8846560046196,12.367176595051,12.685202083051,16.0017644017163,15.658664350156,19.8969909946925,11.6240717411347,14.1948407938534,15.0901073108861,14.7017166727715,14.9818856627394,15.1055283353263,8.09699275181225,13.0949288317687,15.4327376370964,14.835092428919,13.9838974127677,14.4005086001874,19.5223386775271,11.921809497366,13.5172167468066,14.8692821056222,13.7921810863433,14.451309856949,15.7841826862706,16.1606895476576,10.1005608898393,14.4734722111492,13.8891320149544,13.9138554677694,16.5782420068984,15.8183421004536,12.4905288968973,11.2287172053796,16.7599422157673,12.8163182486125,11.0295709559758,15.9988806578091|short_description=p1@Ccdc21}} | ||
|EntrezGene=70012 | |||
|HGNC= | |||
|MCL_coexpression_id=156 | |||
|UniProt=Q8C1L6,A2A9K2,Q8BMK0,A2A9K3 | |||
|association_with_transcript=0bp_to_ENSMUST00000132120,ENSMUST00000137388,ENSMUST00000141384,NM_144527,uc008ved.2,uc008vee.2,uc008vef.2_5end | |||
|description=CAGE_peak_1_at_Ccdc21_5end | |||
|id=chr4:133742934..133743005,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!9.49e-23!147;UBERON:0005057!1.06e-13!51;UBERON:0000466!3.88e-11!79;UBERON:0000926!6.16e-11!193;UBERON:0004120!6.16e-11!193;UBERON:0006603!6.16e-11!193;UBERON:0002553!7.71e-11!39;UBERON:0003886!8.10e-11!38;UBERON:0001041!1.81e-10!92;UBERON:0002323!1.99e-10!37;UBERON:0004458!1.99e-10!37;UBERON:0004177!7.45e-10!29;UBERON:0000949!9.73e-10!72;UBERON:0000077!1.96e-09!97;UBERON:0002405!3.67e-09!70;UBERON:0002530!1.25e-08!65;UBERON:0003101!3.45e-08!16;UBERON:0000079!3.45e-08!16;UBERON:0003135!8.55e-08!15;UBERON:0002368!1.22e-07!60;UBERON:0000473!2.03e-07!14;UBERON:0003408!2.64e-07!24;UBERON:0002370!2.67e-07!23;UBERON:0000974!2.67e-07!23;UBERON:0004807!2.67e-07!23;UBERON:0005058!2.67e-07!23;UBERON:0003351!2.67e-07!23;UBERON:0009113!2.67e-07!23;UBERON:0003295!2.67e-07!23;UBERON:0009722!2.67e-07!23;UBERON:0005562!2.67e-07!23;UBERON:0007690!2.67e-07!23;UBERON:0000991!4.35e-07!18;UBERON:0005564!4.35e-07!18;UBERON:0006562!4.79e-07!24;UBERON:0001557!4.79e-07!24;UBERON:0001042!4.79e-07!24;UBERON:0008814!4.79e-07!24;UBERON:0009145!4.79e-07!24;UBERON:0000464!5.19e-07!57;UBERON:0004176!6.12e-07!17;UBERON:0009196!6.12e-07!17;UBERON:0009117!6.12e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,5.31e-19,134;UBERON:0002553,7.71e-11,39;UBERON:0003886,8.10e-11,38;UBERON:0002323,1.99e-10,37;UBERON:0004458,1.99e-10,37;UBERON:0004177,7.45e-10,29;UBERON:0005057,7.45e-10,29;UBERON:0000949,9.73e-10,72;UBERON:0002530,1.25e-08,65;UBERON:0001041,2.71e-08,80;UBERON:0003101,3.45e-08,16;UBERON:0000079,3.45e-08,16;UBERON:0003135,8.55e-08,15;UBERON:0002368,1.22e-07,60;UBERON:0007811,1.38e-07,36;UBERON:0000473,2.03e-07,14;UBERON:0000153,2.15e-07,43;UBERON:0003408,2.64e-07,24;UBERON:0002370,2.67e-07,23;UBERON:0000974,2.67e-07,23;UBERON:0004807,2.67e-07,23;UBERON:0005058,2.67e-07,23;UBERON:0003351,2.67e-07,23;UBERON:0009113,2.67e-07,23;UBERON:0003295,2.67e-07,23;UBERON:0009722,2.67e-07,23;UBERON:0005562,2.67e-07,23;UBERON:0007690,2.67e-07,23;UBERON:0000077,2.83e-07,35;UBERON:0000991,4.35e-07,18;UBERON:0005564,4.35e-07,18;UBERON:0006562,4.79e-07,24;UBERON:0001557,4.79e-07,24;UBERON:0001042,4.79e-07,24;UBERON:0008814,4.79e-07,24;UBERON:0009145,4.79e-07,24;UBERON:0004176,6.12e-07,17;UBERON:0009196,6.12e-07,17;UBERON:0009117,6.12e-07,17;UBERON:0000926,7.76e-07,120;UBERON:0004120,7.76e-07,120;UBERON:0006603,7.76e-07,120 | |||
|phase1_expression=11.0502704502308,2.09385244583617,2.72999543633722,0.60492842261366,2.50447864973174,11.4157904900085,8.41005506143892,11.879345756625,31.8182512062767,31.3646465271471,19.8612843141586,21.9373437237175,14.2096605842901,10.4030278878607,34.9765249906446,45.5569351627108,84.6469872535057,14.8267217718372,15.4939309974485,16.5511964201232,36.0583550240536,22.1418821177974,19.5899841854202,5.11975752938901,5.04700418347774,1.14846392823004,2.58457197695445,4.30942465371778,3.42042155021473,3.02436155711917,7.53883736228036,43.1820857952549,28.2929802288902,63.3926724061755,11.8429164098023,11.470190529736,10.4126371693808,7.53356935326434,7.813353445238,9.94695113550217,3.52938892818609,6.14740936462601,8.25367600152961,3.9028013572429,3.54819259268301,3.48738829107195,3.12956537739216,12.8634842264463,9.00713349211335,7.19390626574849,9.79904951377538,4.31257693094915,15.268217151254,15.2326049822382,18.4851589528355,6.17422646486273,6.5902691185914,3.6097046459421,9.3065571995415,9.52183762689659,13.3104594736298,7.79342423759004,8.00365316500025,3.5995988691256,1.97773272513395,0,6.2916023208865,3.45796474789399,10.7837196800817,9.45041568321835,9.46462326081219,6.56997264128748,10.6016899656774,10.656699531701,12.6516021744072,11.0306254393203,7.70811166995721,10.9811110753261,5.52983519722476,13.9799464994005,11.9848813119157,12.5019208933622,7.81712397203867,7.87867654044352,8.40390362772456,7.66034322231536,8.11518580554887,12.1159639786445,10.6016670666458,13.6028808192214,9.85539261585705,7.74381489283248,13.599426674155,12.9528765993076,10.3964226791627,11.2006721774334,14.6062196937022,10.5666799998396,5.45550609666024,7.42013106471715,9.01397886570755,12.8326477414318,5.09610479413291,14.2213340630666,8.65964164044856,7.09407623330276,9.60496445528088,12.2176751299394,24.081223179187,12.0238132642508,14.2257967948231,12.1786191324856,11.5307748628029,12.3592565253151,15.6392980490487,8.04266184509923,17.0564527736718,8.09756398751505,31.8459798701955,18.1178871941098,24.7342500675641,28.1227646818429,9.31958806090611,9.36898550436951,14.0329293565015,6.64188343542338,16.4146720573111,17.3971791988088,20.7124470129095,8.53806644607489,11.4375150704657,7.79056983099759,10.2556348913443,8.69432554923124,8.93488591606108,11.5191296778108,12.6280811174392,22.2688477392066,24.0086620511991,10.5220927943237,16.6554166992261,14.2539304748753,17.4660265911189,21.701493768343,20.2748767470957,28.6974733438064,21.8325018224168,22.7658966250334,15.5208954911646,17.0195472151037,13.724187684788,13.1517439456545,14.4584569597311,13.5818344943645,12.7584924572925,16.9179126795719,16.1509033082044,10.5512641917033,21.8805894534606,13.4631752148076,16.1822981386956,19.9868888221726,16.5721314909647,23.0214151144462,19.2833891109223,23.0208605302904,22.2666923161684,19.4998121753173,16.6205448412615,14.7750717671186,11.6739085746032,9.21059920779594,12.953456802172,11.541752013392,11.3556572224629,11.6282211988591,4.62586296177317,5.81791246659797,17.0630600428187,14.8631469990681,14.0465532841082,14.117846723634,14.8993289376063,13.5060194539917,10.9141684155238,6.42325923423642,8.29406189040889,7.95825888164603,7.99352757188393,9.88701349519644,6.48414149624083,8.16479220342906,14.9837641752935,17.2515254040691,5.63538678365402,13.6446389656361,11.2492442557223,10.5905088034381,11.5722862937391,10.1851002105925,10.047918581848,10.1185674415876,21.3445891502747,25.0267658574141,21.8180484575655,26.9834534861824,30.8347384510524,33.2824480458335,29.0273471030819,33.6604480817448,43.9386464560346,26.3578956660558,25.8782771749238,26.7941482321322,26.5232022147376,31.8249386213361,14.8899853223187,26.0519501536218,11.0851914099963,14.7803301180978,20.0446921023692,14.7678224624414,19.4792906079457,15.0755631697634,14.2826184531608,13.8544889979037,15.6058792665129,13.0664166892777,11.4807433433391,8.68475567993411,9.32498902075836,9.69148692496127,4.52373851817817,6.52686820582452,17.7035138286853,15.452457793065,7.38532713943843,8.08760637486202,9.01642199571715,15.1482556322624,11.6738041184015,10.5418460960092,14.4333676480975,10.5146271099123,11.8083297263669,12.1722908239198,14.5731852602962,9.9366991689846,10.6727700045561,16.708708453934,14.7617688616599,16.5601011410547,12.3794089108718,8.57844639457184,22.5666735177937,12.624593080059,10.2790009368015,21.1237689326606,18.8993211443695,23.6725063916824,23.2585463851399,21.0849563096953,16.0423820273125,23.0706833293146,14.7586052004998,21.6584640821192,11.234506989875,19.2665370613502,11.5129228566652,10.9311887866112,12.0591358876746,12.1290795969408,8.06290200950393,9.74287837166718,11.2642419870581,10.3797714723272,24.6991805821557,7.58476763530808,9.84933002845024,11.2785169615651,8.47543642422269,8.53532678674319,10.2018292820448,8.34413859047294,31.6111129476027,16.717336305021,21.6677597022563,47.4688511651821,45.3824836033804,40.0361803111415,15.8079939894285,13.2953879707475,16.5839968565309,5.72802370809068,12.6534397432454,16.6721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| |||
|short_description=p1@Ccdc21 | |||
}} |
Revision as of 04:04, 14 September 2013
Short description: | p1@Ccdc21 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc21_5end |
Coexpression cluster: | MCL_coexpression_mm9:156 |
Association with transcript: | 0bp_to_ENSMUST00000132120, ENSMUST00000137388, ENSMUST00000141384, NM_144527, uc008ved.2, uc008vee.2, uc008vef.2_5end |
EntrezGene: | Ccdc21 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.