FFCP PHASE1:Mm9::chr4:151490501..151490511,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=85030|HGNC=|MCL_coexpression_id=29|UniProt=|association_with_transcript=0bp_to_ENSMUST00000127111_5end|description=CAGE_peak_5_at_Tnfrsf25_5end|id=chr4:151490501..151490511,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000815,3.07e-86,1;CL:0000792,3.07e-86,1;CL:0000624,2.93e-12,8;CL:0000791,4.56e-11,9;CL:0000789,4.56e-11,9;CL:0002420,4.56e-11,9;CL:0002419,4.56e-11,9;CL:0000790,4.56e-11,9;CL:0000084,2.51e-09,11;CL:0000827,2.51e-09,11;CL:0000838,1.13e-08,12;CL:0000542,4.08e-08,13;CL:0000051,4.08e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.21e-22!23;UBERON:0000974!1.21e-22!23;UBERON:0004807!1.21e-22!23;UBERON:0005058!1.21e-22!23;UBERON:0003351!1.21e-22!23;UBERON:0009113!1.21e-22!23;UBERON:0003295!1.21e-22!23;UBERON:0009722!1.21e-22!23;UBERON:0005562!1.21e-22!23;UBERON:0007690!1.21e-22!23;UBERON:0006562!1.42e-21!24;UBERON:0003408!1.42e-21!24;UBERON:0001557!1.42e-21!24;UBERON:0001042!1.42e-21!24;UBERON:0008814!1.42e-21!24;UBERON:0009145!1.42e-21!24;UBERON:0004177!4.95e-20!29;UBERON:0000072!7.60e-19!27;UBERON:0000063!7.38e-14!35;UBERON:0000065!2.81e-13!41;UBERON:0001004!6.93e-13!42;UBERON:0002193!1.39e-12!48;UBERON:0002390!9.06e-12!45;UBERON:0003061!9.06e-12!45;UBERON:0005057!5.17e-10!51;UBERON:0003929!9.23e-08!55;UBERON:0002405!1.44e-07!70;UBERON:0002368!7.03e-07!60|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,6.06879620175408,0,0,0,0.0797721589953364,0.513602189793617,0.524522414513984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.79472541912506,0.600977247599844,0.886137163047463,0.403865799792591,0.0762068066549998,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p5@Tnfrsf25}} | ||
|EntrezGene=85030 | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000127111_5end | |||
|description=CAGE_peak_5_at_Tnfrsf25_5end | |||
|id=chr4:151490501..151490511,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,3.07e-86,1;CL:0000792,3.07e-86,1;CL:0000624,2.93e-12,8;CL:0000791,4.56e-11,9;CL:0000789,4.56e-11,9;CL:0002420,4.56e-11,9;CL:0002419,4.56e-11,9;CL:0000790,4.56e-11,9;CL:0000084,2.51e-09,11;CL:0000827,2.51e-09,11;CL:0000838,1.13e-08,12;CL:0000542,4.08e-08,13;CL:0000051,4.08e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.21e-22!23;UBERON:0000974!1.21e-22!23;UBERON:0004807!1.21e-22!23;UBERON:0005058!1.21e-22!23;UBERON:0003351!1.21e-22!23;UBERON:0009113!1.21e-22!23;UBERON:0003295!1.21e-22!23;UBERON:0009722!1.21e-22!23;UBERON:0005562!1.21e-22!23;UBERON:0007690!1.21e-22!23;UBERON:0006562!1.42e-21!24;UBERON:0003408!1.42e-21!24;UBERON:0001557!1.42e-21!24;UBERON:0001042!1.42e-21!24;UBERON:0008814!1.42e-21!24;UBERON:0009145!1.42e-21!24;UBERON:0004177!4.95e-20!29;UBERON:0000072!7.60e-19!27;UBERON:0000063!7.38e-14!35;UBERON:0000065!2.81e-13!41;UBERON:0001004!6.93e-13!42;UBERON:0002193!1.39e-12!48;UBERON:0002390!9.06e-12!45;UBERON:0003061!9.06e-12!45;UBERON:0005057!5.17e-10!51;UBERON:0003929!9.23e-08!55;UBERON:0002405!1.44e-07!70;UBERON:0002368!7.03e-07!60 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,6.06879620175408,0,0,0,0.0797721589953364,0.513602189793617,0.524522414513984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.79472541912506,0.600977247599844,0.886137163047463,0.403865799792591,0.0762068066549998,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Tnfrsf25 | |||
}} |
Revision as of 04:34, 14 September 2013
Short description: | p5@Tnfrsf25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tnfrsf25_5end |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | 0bp_to_ENSMUST00000127111_5end |
EntrezGene: | Tnfrsf25 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 3.07e-86 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.07e-86 | 1 |
CD4-positive, alpha-beta T cell | 2.93e-12 | 8 |
mature alpha-beta T cell | 4.56e-11 | 9 |
alpha-beta T cell | 4.56e-11 | 9 |
immature T cell | 4.56e-11 | 9 |
mature T cell | 4.56e-11 | 9 |
immature alpha-beta T cell | 4.56e-11 | 9 |
T cell | 2.51e-09 | 11 |
pro-T cell | 2.51e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.13e-08 | 12 |
lymphocyte | 4.08e-08 | 13 |
common lymphoid progenitor | 4.08e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.