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FFCP PHASE1:Mm9::chr6:29162405..29162427,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:29162405..29162427,+|id=chr6:29162405..29162427,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,5.26e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0007811,8.59e-25,36;UBERON:0000153,4.69e-20,43;UBERON:0002370,2.84e-18,23;UBERON:0000974,2.84e-18,23;UBERON:0004807,2.84e-18,23;UBERON:0005058,2.84e-18,23;UBERON:0003351,2.84e-18,23;UBERON:0009113,2.84e-18,23;UBERON:0003295,2.84e-18,23;UBERON:0009722,2.84e-18,23;UBERON:0005562,2.84e-18,23;UBERON:0007690,2.84e-18,23;UBERON:0006562,2.15e-17,24;UBERON:0003408,2.15e-17,24;UBERON:0001557,2.15e-17,24;UBERON:0001042,2.15e-17,24;UBERON:0008814,2.15e-17,24;UBERON:0009145,2.15e-17,24;UBERON:0000072,3.78e-15,27;UBERON:0004177,6.54e-14,29;UBERON:0005057,6.54e-14,29;UBERON:0000077,6.42e-13,35;UBERON:0000970,3.03e-11,9;UBERON:0000019,3.03e-11,9;UBERON:0000047,3.03e-11,9;UBERON:0010312,3.03e-11,9;UBERON:0004088,3.03e-11,9;UBERON:0002104,3.03e-11,9;UBERON:0001456,3.03e-11,9;UBERON:0003072,3.03e-11,9;UBERON:0004128,3.03e-11,9;UBERON:0003071,3.03e-11,9;UBERON:0001444,4.53e-09,11;UBERON:0000065,4.94e-09,41;UBERON:0001004,9.40e-09,42;UBERON:0003929,2.69e-08,55;UBERON:0000020,2.96e-08,12;UBERON:0001032,2.96e-08,12;UBERON:0004456,2.96e-08,12;UBERON:0002390,5.44e-08,45;UBERON:0003061,5.44e-08,45;UBERON:0000033,1.45e-07,13;UBERON:0005085,1.45e-07,13;UBERON:0002193,2.52e-07,48;UBERON:0002405,2.52e-07,48;UBERON:0002410,5.26e-07,9|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,2.111830832275,3.97909694747389,0.171217968225505,0,0.513602189793617,1.13646523144697,0,0,0,0.157731082679119,0,0,0.425216450755349,0.198581902401771,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0.866554859253824,0.166234645358492,1.22501613757421,0,0,0,2.94115744015507,0,0.485510353031154,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,0,0.725827286159344,0.405017814995072,0,0,0.220868540951614,0.489963196859816,0.191690942036473,0,0,0,0,0.659431438650969,0.640413505216868,0.52091337055676,0,0,0.763991238884051,0.589257170947335,0.284743361598206,0.372798891650601,0,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,1.02258193546835,0.259786004602869,0.70667914902068,0.281686839553361,2.56652954828636,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0,0.608930956624282,0,0,0.23517741427141,0,0,1.87979163995885,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.479260498023681,2.39961092397363,0.254140454146129,0.599162557619291,0.457500602818626,0.628271760564322,0,0,0.62336413367868,0.324482526135515,0,0.124406970610093,0,0.420883711772948,0.780722657776222,1.14951052216736,0.540186389416048,2.56198190320716,2.04109497453984,4.35586648968489,3.46696380870997,5.43277078551933,0,0,0.703804496655795,0.43839146485515,0,0,0,0,0.702213187313235,0.772043721344145,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0.438599962275997,0.439100230582101,0.536825675041487,0.210289948564127,0.92614151141356,0,0,0.639864751605702,0.696710015581316,0.128867461322093,0.201683524623343,0.667134131534611,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.379419222745544,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,0.797273843287435,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0.631016438832513,1.17131623288992,1.29254038639679,0.477937595905104,1.55959071857676,2.26461224631066,1.21443210502468,0.876767573733936,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,0.535106452806212,0.987294123612726,0,0.469343416127421,0.21183207086382,0.220528398054962,0,0,0.180938774784468,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,2.03974115992626,1.6794174278839,0.552799895217695,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,3.16011120628178,0,0,0.129920822977795,0.179026695667481,1.39076948346885,0.721172697119813,0.886137163047463,2.1202954489111,1.21930890648,2.31900225814733,2.33898913775406,2.79014340756955,3.27255326108393,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0,0.187283014939765,0.320125762024346,0.402048282689293,0,0,0.38581844092741,0.824171801606613,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0.309873682371932,0.385813221962283,0.749431733813838,0.467863216890817,0.429742108096597,0.956441660344217,0,0.231867835620421|short_description=p@chr6:29162405..29162427,+}}
|EntrezGene=NA
|HGNC=
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr6:29162405..29162427,+
|id=chr6:29162405..29162427,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000107,5.26e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0007811,8.59e-25,36;UBERON:0000153,4.69e-20,43;UBERON:0002370,2.84e-18,23;UBERON:0000974,2.84e-18,23;UBERON:0004807,2.84e-18,23;UBERON:0005058,2.84e-18,23;UBERON:0003351,2.84e-18,23;UBERON:0009113,2.84e-18,23;UBERON:0003295,2.84e-18,23;UBERON:0009722,2.84e-18,23;UBERON:0005562,2.84e-18,23;UBERON:0007690,2.84e-18,23;UBERON:0006562,2.15e-17,24;UBERON:0003408,2.15e-17,24;UBERON:0001557,2.15e-17,24;UBERON:0001042,2.15e-17,24;UBERON:0008814,2.15e-17,24;UBERON:0009145,2.15e-17,24;UBERON:0000072,3.78e-15,27;UBERON:0004177,6.54e-14,29;UBERON:0005057,6.54e-14,29;UBERON:0000077,6.42e-13,35;UBERON:0000970,3.03e-11,9;UBERON:0000019,3.03e-11,9;UBERON:0000047,3.03e-11,9;UBERON:0010312,3.03e-11,9;UBERON:0004088,3.03e-11,9;UBERON:0002104,3.03e-11,9;UBERON:0001456,3.03e-11,9;UBERON:0003072,3.03e-11,9;UBERON:0004128,3.03e-11,9;UBERON:0003071,3.03e-11,9;UBERON:0001444,4.53e-09,11;UBERON:0000065,4.94e-09,41;UBERON:0001004,9.40e-09,42;UBERON:0003929,2.69e-08,55;UBERON:0000020,2.96e-08,12;UBERON:0001032,2.96e-08,12;UBERON:0004456,2.96e-08,12;UBERON:0002390,5.44e-08,45;UBERON:0003061,5.44e-08,45;UBERON:0000033,1.45e-07,13;UBERON:0005085,1.45e-07,13;UBERON:0002193,2.52e-07,48;UBERON:0002405,2.52e-07,48;UBERON:0002410,5.26e-07,9
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,2.111830832275,3.97909694747389,0.171217968225505,0,0.513602189793617,1.13646523144697,0,0,0,0.157731082679119,0,0,0.425216450755349,0.198581902401771,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0.866554859253824,0.166234645358492,1.22501613757421,0,0,0,2.94115744015507,0,0.485510353031154,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,0,0.725827286159344,0.405017814995072,0,0,0.220868540951614,0.489963196859816,0.191690942036473,0,0,0,0,0.659431438650969,0.640413505216868,0.52091337055676,0,0,0.763991238884051,0.589257170947335,0.284743361598206,0.372798891650601,0,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,1.02258193546835,0.259786004602869,0.70667914902068,0.281686839553361,2.56652954828636,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0,0.608930956624282,0,0,0.23517741427141,0,0,1.87979163995885,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.479260498023681,2.39961092397363,0.254140454146129,0.599162557619291,0.457500602818626,0.628271760564322,0,0,0.62336413367868,0.324482526135515,0,0.124406970610093,0,0.420883711772948,0.780722657776222,1.14951052216736,0.540186389416048,2.56198190320716,2.04109497453984,4.35586648968489,3.46696380870997,5.43277078551933,0,0,0.703804496655795,0.43839146485515,0,0,0,0,0.702213187313235,0.772043721344145,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0.438599962275997,0.439100230582101,0.536825675041487,0.210289948564127,0.92614151141356,0,0,0.639864751605702,0.696710015581316,0.128867461322093,0.201683524623343,0.667134131534611,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.379419222745544,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,0.797273843287435,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0.631016438832513,1.17131623288992,1.29254038639679,0.477937595905104,1.55959071857676,2.26461224631066,1.21443210502468,0.876767573733936,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,0.535106452806212,0.987294123612726,0,0.469343416127421,0.21183207086382,0.220528398054962,0,0,0.180938774784468,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,2.03974115992626,1.6794174278839,0.552799895217695,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,3.16011120628178,0,0,0.129920822977795,0.179026695667481,1.39076948346885,0.721172697119813,0.886137163047463,2.1202954489111,1.21930890648,2.31900225814733,2.33898913775406,2.79014340756955,3.27255326108393,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0,0.187283014939765,0.320125762024346,0.402048282689293,0,0,0.38581844092741,0.824171801606613,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0.309873682371932,0.385813221962283,0.749431733813838,0.467863216890817,0.429742108096597,0.956441660344217,0,0.231867835620421
|short_description=p@chr6:29162405..29162427,+
}}

Revision as of 09:32, 14 September 2013

Short description:p@chr6:29162405..29162427, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr6:29162405..29162427, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr6:29162405..29162427+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron5.26e-079

Uber anatomy
Ontology termp-valuen
craniocervical region8.59e-2536
anterior region of body4.69e-2043
thymus2.84e-1823
neck2.84e-1823
respiratory system epithelium2.84e-1823
hemolymphoid system gland2.84e-1823
pharyngeal epithelium2.84e-1823
thymic region2.84e-1823
pharyngeal gland2.84e-1823
entire pharyngeal arch endoderm2.84e-1823
thymus primordium2.84e-1823
early pharyngeal endoderm2.84e-1823
pharynx2.15e-1724
gland of gut2.15e-1724
upper respiratory tract2.15e-1724
chordate pharynx2.15e-1724
pharyngeal arch system2.15e-1724
pharyngeal region of foregut2.15e-1724
segment of respiratory tract3.78e-1527
hemopoietic organ6.54e-1429
immune organ6.54e-1429
mixed endoderm/mesoderm-derived structure6.42e-1335
eye3.03e-119
camera-type eye3.03e-119
simple eye3.03e-119
immature eye3.03e-119
ocular region3.03e-119
visual system3.03e-119
face3.03e-119
optic cup3.03e-119
optic vesicle3.03e-119
eye primordium3.03e-119
subdivision of head4.53e-0911
respiratory tract4.94e-0941
respiratory system9.40e-0942
gut epithelium2.69e-0855
sense organ2.96e-0812
sensory system2.96e-0812
entire sense organ system2.96e-0812
hematopoietic system5.44e-0845
blood island5.44e-0845
head1.45e-0713
ectodermal placode1.45e-0713
hemolymphoid system2.52e-0748
immune system2.52e-0748
autonomic nervous system5.26e-079







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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