FFCP PHASE1:Mm9::chr6:29476684..29476685,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27056|HGNC=|MCL_coexpression_id=38|UniProt=Q3U169|association_with_transcript=-47bp_to_uc009bdu.1,uc009bdv.1_5end|description=CAGE_peak_6_at_Irf5_5end|id=chr6:29476684..29476685,+|ontology_enrichment_celltype=CL:0000988!8.37e-07!32;CL:0002032!8.37e-07!32;CL:0000037!8.37e-07!32;CL:0000566!8.37e-07!32;CL:0000837!8.37e-07!32|ontology_enrichment_celltype_v019_2=CL:0002092,3.35e-23,3;CL:0002540,3.35e-23,3;CL:0002476,3.44e-16,2;CL:0000839,1.63e-09,13;CL:0002194,1.48e-08,4;CL:0000766,1.48e-08,4;CL:0000234,1.48e-08,4;CL:0000576,1.48e-08,4;CL:0000235,1.48e-08,4;CL:0000864,1.48e-08,4;CL:0002009,1.48e-08,4;CL:0000040,1.48e-08,4;CL:0000559,1.48e-08,4;CL:0000763,8.99e-08,16;CL:0002320,1.48e-07,46;CL:0000134,1.48e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.56e-12!48;UBERON:0002405!6.84e-11!70;UBERON:0002390!1.53e-10!45;UBERON:0003061!1.53e-10!45;UBERON:0002371!4.22e-09!16;UBERON:0002204!5.82e-09!32;UBERON:0001474!1.27e-08!22;UBERON:0004765!1.27e-08!22;UBERON:0001434!1.27e-08!22;UBERON:0003081!5.03e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.52e-22,16;UBERON:0001474,2.65e-16,22;UBERON:0004765,2.65e-16,22;UBERON:0001434,2.65e-16,22;UBERON:0002204,4.45e-11,32;UBERON:0002390,9.78e-08,45;UBERON:0003061,9.78e-08,45;UBERON:0002384,1.48e-07,46;UBERON:0002193,3.21e-07,48;UBERON:0002405,3.21e-07,48|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0.140788722151667,0.468129052643987,0,0.239316476986009,0,0,0.333109761815663,0.202475267389826,0,2.36596624018678,1.09691546884591,0,0.0850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0.838913030288682,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,3.5995988691256,1.97773272513395,2.1314403448383,0.599200221036809,0.768436610643109,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0.479260498023681,0,0.381210681219194,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.403367049246685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0.486405680325106,0,1.43768206527355,0.744281895337007,0,1.01031551178845,0.538192240565737,0,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,3.01582567878545,2.17562273527484,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0.683483523191411,0.412773735926445,0.185194527369712,0.753473828018764,0.820165366326151,0.915112692826091,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.324016022465404,0,0,0.539457385539283,0.247960367176008,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0,0,0,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0.231867835620421|short_description=p6@Irf5}} | ||
|EntrezGene=27056 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt=Q3U169 | |||
|association_with_transcript=-47bp_to_uc009bdu.1,uc009bdv.1_5end | |||
|description=CAGE_peak_6_at_Irf5_5end | |||
|id=chr6:29476684..29476685,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.37e-07!32;CL:0002032!8.37e-07!32;CL:0000037!8.37e-07!32;CL:0000566!8.37e-07!32;CL:0000837!8.37e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.35e-23,3;CL:0002540,3.35e-23,3;CL:0002476,3.44e-16,2;CL:0000839,1.63e-09,13;CL:0002194,1.48e-08,4;CL:0000766,1.48e-08,4;CL:0000234,1.48e-08,4;CL:0000576,1.48e-08,4;CL:0000235,1.48e-08,4;CL:0000864,1.48e-08,4;CL:0002009,1.48e-08,4;CL:0000040,1.48e-08,4;CL:0000559,1.48e-08,4;CL:0000763,8.99e-08,16;CL:0002320,1.48e-07,46;CL:0000134,1.48e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.56e-12!48;UBERON:0002405!6.84e-11!70;UBERON:0002390!1.53e-10!45;UBERON:0003061!1.53e-10!45;UBERON:0002371!4.22e-09!16;UBERON:0002204!5.82e-09!32;UBERON:0001474!1.27e-08!22;UBERON:0004765!1.27e-08!22;UBERON:0001434!1.27e-08!22;UBERON:0003081!5.03e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.52e-22,16;UBERON:0001474,2.65e-16,22;UBERON:0004765,2.65e-16,22;UBERON:0001434,2.65e-16,22;UBERON:0002204,4.45e-11,32;UBERON:0002390,9.78e-08,45;UBERON:0003061,9.78e-08,45;UBERON:0002384,1.48e-07,46;UBERON:0002193,3.21e-07,48;UBERON:0002405,3.21e-07,48 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0.140788722151667,0.468129052643987,0,0.239316476986009,0,0,0.333109761815663,0.202475267389826,0,2.36596624018678,1.09691546884591,0,0.0850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0.838913030288682,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,3.5995988691256,1.97773272513395,2.1314403448383,0.599200221036809,0.768436610643109,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0.479260498023681,0,0.381210681219194,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.403367049246685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0.486405680325106,0,1.43768206527355,0.744281895337007,0,1.01031551178845,0.538192240565737,0,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,3.01582567878545,2.17562273527484,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0.683483523191411,0.412773735926445,0.185194527369712,0.753473828018764,0.820165366326151,0.915112692826091,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.324016022465404,0,0,0.539457385539283,0.247960367176008,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0,0,0,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p6@Irf5 | |||
}} |
Revision as of 09:33, 14 September 2013
Short description: | p6@Irf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Irf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | -47bp_to_uc009bdu.1, uc009bdv.1_5end |
EntrezGene: | Irf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.35e-23 | 3 |
mesenchymal stem cell of the bone marrow | 3.35e-23 | 3 |
bone marrow macrophage | 3.44e-16 | 2 |
myeloid lineage restricted progenitor cell | 1.63e-09 | 13 |
monopoietic cell | 1.48e-08 | 4 |
myeloid leukocyte | 1.48e-08 | 4 |
phagocyte | 1.48e-08 | 4 |
monocyte | 1.48e-08 | 4 |
macrophage | 1.48e-08 | 4 |
tissue-resident macrophage | 1.48e-08 | 4 |
macrophage dendritic cell progenitor | 1.48e-08 | 4 |
monoblast | 1.48e-08 | 4 |
promonocyte | 1.48e-08 | 4 |
myeloid cell | 8.99e-08 | 16 |
connective tissue cell | 1.48e-07 | 46 |
mesenchymal cell | 1.48e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.52e-22 | 16 |
bone element | 2.65e-16 | 22 |
skeletal element | 2.65e-16 | 22 |
skeletal system | 2.65e-16 | 22 |
musculoskeletal system | 4.45e-11 | 32 |
hematopoietic system | 9.78e-08 | 45 |
blood island | 9.78e-08 | 45 |
connective tissue | 1.48e-07 | 46 |
hemolymphoid system | 3.21e-07 | 48 |
immune system | 3.21e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.