FFCP PHASE1:Mm9::chr6:70676471..70676482,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=192|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:70676471..70676482,+|id=chr6:70676471..70676482,+|ontology_enrichment_celltype=CL:0000553!1.76e-11!6;CL:0000556!1.76e-11!6;CL:0000050!2.75e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,2.35e-22,6;CL:0000556,2.35e-22,6;CL:0000050,1.01e-14,9;CL:0002027,7.46e-12,3;CL:0002006,7.46e-12,3;CL:0002024,7.46e-12,3;CL:0000839,5.20e-10,13;CL:0000763,5.10e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.75e-14!51;UBERON:0002465!8.09e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.36e-12,3;UBERON:0007023,1.23e-09,51;UBERON:0002193,4.14e-09,48;UBERON:0002405,4.14e-09,48;UBERON:0001962,6.99e-09,2;UBERON:0001961,6.99e-09,2;UBERON:0001744,6.99e-09,2;UBERON:0001155,3.49e-08,2;UBERON:0000059,3.49e-08,2;UBERON:0002371,5.10e-08,16;UBERON:0001474,1.56e-07,22;UBERON:0004765,1.56e-07,22;UBERON:0001434,1.56e-07,22|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,10.3264026162855,15.3881203216268,3.49780939064073,17.9813434254195,16.7279608999001,7.21462408056651,0.425216450755349,0,0,29.1186209484,17.2056960800378,0,0,0,0.950117097281869,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,5.36904339384756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,41.9479371508418,0.148442139064825,0,0,0,0,0,0,0,0.86759614151947,2.65383165584962,0,0,0,1.86391761218122,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,1.32167513193519,1.58670339998127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,2.87536413054709,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,3.98235415019888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0,0,21.5297309805294,0,0,0.941842285023455,1.23024804948923,1.14389086603261,0,0.69975726161829,0,0.954670618015114,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,1.54551675225752,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr6:70676471..70676482,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=192 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:70676471..70676482,+ | |||
|id=chr6:70676471..70676482,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.76e-11!6;CL:0000556!1.76e-11!6;CL:0000050!2.75e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.35e-22,6;CL:0000556,2.35e-22,6;CL:0000050,1.01e-14,9;CL:0002027,7.46e-12,3;CL:0002006,7.46e-12,3;CL:0002024,7.46e-12,3;CL:0000839,5.20e-10,13;CL:0000763,5.10e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-14!51;UBERON:0002465!8.09e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.36e-12,3;UBERON:0007023,1.23e-09,51;UBERON:0002193,4.14e-09,48;UBERON:0002405,4.14e-09,48;UBERON:0001962,6.99e-09,2;UBERON:0001961,6.99e-09,2;UBERON:0001744,6.99e-09,2;UBERON:0001155,3.49e-08,2;UBERON:0000059,3.49e-08,2;UBERON:0002371,5.10e-08,16;UBERON:0001474,1.56e-07,22;UBERON:0004765,1.56e-07,22;UBERON:0001434,1.56e-07,22 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,10.3264026162855,15.3881203216268,3.49780939064073,17.9813434254195,16.7279608999001,7.21462408056651,0.425216450755349,0,0,29.1186209484,17.2056960800378,0,0,0,0.950117097281869,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,5.36904339384756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,41.9479371508418,0.148442139064825,0,0,0,0,0,0,0,0.86759614151947,2.65383165584962,0,0,0,1.86391761218122,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,1.32167513193519,1.58670339998127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,2.87536413054709,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,3.98235415019888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0,0,0,0,21.5297309805294,0,0,0.941842285023455,1.23024804948923,1.14389086603261,0,0.69975726161829,0,0.954670618015114,0,0,0,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,1.54551675225752,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr6:70676471..70676482,+ | |||
}} |
Revision as of 10:30, 14 September 2013
Short description: | p@chr6:70676471..70676482, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:70676471..70676482, + |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.35e-22 | 6 |
megakaryocyte | 2.35e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 1.01e-14 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 7.46e-12 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.46e-12 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.46e-12 | 3 |
myeloid lineage restricted progenitor cell | 5.20e-10 | 13 |
myeloid cell | 5.10e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.36e-12 | 3 |
adult organism | 1.23e-09 | 51 |
hemolymphoid system | 4.14e-09 | 48 |
immune system | 4.14e-09 | 48 |
gut-associated lymphoid tissue | 6.99e-09 | 2 |
mucosa-associated lymphoid tissue | 6.99e-09 | 2 |
lymphoid tissue | 6.99e-09 | 2 |
colon | 3.49e-08 | 2 |
large intestine | 3.49e-08 | 2 |
bone marrow | 5.10e-08 | 16 |
bone element | 1.56e-07 | 22 |
skeletal element | 1.56e-07 | 22 |
skeletal system | 1.56e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.