FFCP PHASE1:Mm9::chr7:147404157..147404185,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=244233|HGNC=|MCL_coexpression_id=784|UniProt=G5E858,Q8CGY7,Q8BIC8|association_with_transcript=0bp_to_ENSMUST00000026531,ENSMUST00000084460,NM_172909,uc009khi.2,uc009khj.2,uc009khk.1_5end|description=CAGE_peak_1_at_Cd163l1_5end|id=chr7:147404157..147404185,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000625,2.44e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!5.82e-13!23;UBERON:0000974!5.82e-13!23;UBERON:0004807!5.82e-13!23;UBERON:0005058!5.82e-13!23;UBERON:0003351!5.82e-13!23;UBERON:0009113!5.82e-13!23;UBERON:0003295!5.82e-13!23;UBERON:0009722!5.82e-13!23;UBERON:0005562!5.82e-13!23;UBERON:0007690!5.82e-13!23;UBERON:0006562!2.78e-12!24;UBERON:0003408!2.78e-12!24;UBERON:0001557!2.78e-12!24;UBERON:0001042!2.78e-12!24;UBERON:0008814!2.78e-12!24;UBERON:0009145!2.78e-12!24;UBERON:0004177!3.46e-11!29;UBERON:0000065!1.17e-10!41;UBERON:0000072!1.49e-10!27;UBERON:0001004!2.66e-10!42;UBERON:0000063!2.03e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.31e-20,23;UBERON:0000974,7.31e-20,23;UBERON:0004807,7.31e-20,23;UBERON:0005058,7.31e-20,23;UBERON:0003351,7.31e-20,23;UBERON:0009113,7.31e-20,23;UBERON:0003295,7.31e-20,23;UBERON:0009722,7.31e-20,23;UBERON:0005562,7.31e-20,23;UBERON:0007690,7.31e-20,23;UBERON:0006562,5.16e-19,24;UBERON:0003408,5.16e-19,24;UBERON:0001557,5.16e-19,24;UBERON:0001042,5.16e-19,24;UBERON:0008814,5.16e-19,24;UBERON:0009145,5.16e-19,24;UBERON:0000072,7.63e-17,27;UBERON:0004177,1.21e-15,29;UBERON:0005057,1.21e-15,29;UBERON:0000077,7.27e-13,35;UBERON:0007811,1.72e-12,36;UBERON:0002193,1.23e-11,48;UBERON:0002405,1.23e-11,48;UBERON:0000065,6.81e-11,41;UBERON:0001004,1.28e-10,42;UBERON:0000153,2.34e-10,43;UBERON:0002390,7.21e-10,45;UBERON:0003061,7.21e-10,45;UBERON:0000029,2.06e-08,1;UBERON:0001097,2.06e-08,1;UBERON:0003968,2.06e-08,1;UBERON:0001467,2.06e-08,1;UBERON:0003929,5.95e-08,55;UBERON:0002368,3.13e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3191684369009,14.1047886135025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0,0.520455980298408,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.180938774784468,0.238744688006273,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,13.7853146397312,13.660557302922,10.0039033692902,7.87717460936918,4.56967115996909,2.40390899039938,2.80610101631697,1.11063094942962,0.685861259894999,0.504130925684203,0,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p1@Cd163l1}} | ||
|EntrezGene=244233 | |||
|HGNC= | |||
|MCL_coexpression_id=784 | |||
|UniProt=G5E858,Q8CGY7,Q8BIC8 | |||
|association_with_transcript=0bp_to_ENSMUST00000026531,ENSMUST00000084460,NM_172909,uc009khi.2,uc009khj.2,uc009khk.1_5end | |||
|description=CAGE_peak_1_at_Cd163l1_5end | |||
|id=chr7:147404157..147404185,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.44e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.82e-13!23;UBERON:0000974!5.82e-13!23;UBERON:0004807!5.82e-13!23;UBERON:0005058!5.82e-13!23;UBERON:0003351!5.82e-13!23;UBERON:0009113!5.82e-13!23;UBERON:0003295!5.82e-13!23;UBERON:0009722!5.82e-13!23;UBERON:0005562!5.82e-13!23;UBERON:0007690!5.82e-13!23;UBERON:0006562!2.78e-12!24;UBERON:0003408!2.78e-12!24;UBERON:0001557!2.78e-12!24;UBERON:0001042!2.78e-12!24;UBERON:0008814!2.78e-12!24;UBERON:0009145!2.78e-12!24;UBERON:0004177!3.46e-11!29;UBERON:0000065!1.17e-10!41;UBERON:0000072!1.49e-10!27;UBERON:0001004!2.66e-10!42;UBERON:0000063!2.03e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.31e-20,23;UBERON:0000974,7.31e-20,23;UBERON:0004807,7.31e-20,23;UBERON:0005058,7.31e-20,23;UBERON:0003351,7.31e-20,23;UBERON:0009113,7.31e-20,23;UBERON:0003295,7.31e-20,23;UBERON:0009722,7.31e-20,23;UBERON:0005562,7.31e-20,23;UBERON:0007690,7.31e-20,23;UBERON:0006562,5.16e-19,24;UBERON:0003408,5.16e-19,24;UBERON:0001557,5.16e-19,24;UBERON:0001042,5.16e-19,24;UBERON:0008814,5.16e-19,24;UBERON:0009145,5.16e-19,24;UBERON:0000072,7.63e-17,27;UBERON:0004177,1.21e-15,29;UBERON:0005057,1.21e-15,29;UBERON:0000077,7.27e-13,35;UBERON:0007811,1.72e-12,36;UBERON:0002193,1.23e-11,48;UBERON:0002405,1.23e-11,48;UBERON:0000065,6.81e-11,41;UBERON:0001004,1.28e-10,42;UBERON:0000153,2.34e-10,43;UBERON:0002390,7.21e-10,45;UBERON:0003061,7.21e-10,45;UBERON:0000029,2.06e-08,1;UBERON:0001097,2.06e-08,1;UBERON:0003968,2.06e-08,1;UBERON:0001467,2.06e-08,1;UBERON:0003929,5.95e-08,55;UBERON:0002368,3.13e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3191684369009,14.1047886135025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0,0.520455980298408,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.180938774784468,0.238744688006273,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,13.7853146397312,13.660557302922,10.0039033692902,7.87717460936918,4.56967115996909,2.40390899039938,2.80610101631697,1.11063094942962,0.685861259894999,0.504130925684203,0,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p1@Cd163l1 | |||
}} |
Revision as of 12:13, 14 September 2013
Short description: | p1@Cd163l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd163l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:784 |
Association with transcript: | 0bp_to_ENSMUST00000026531, ENSMUST00000084460, NM_172909, uc009khi.2, uc009khj.2, uc009khk.1_5end |
EntrezGene: | Cd163l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.44e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.31e-20 | 23 |
neck | 7.31e-20 | 23 |
respiratory system epithelium | 7.31e-20 | 23 |
hemolymphoid system gland | 7.31e-20 | 23 |
pharyngeal epithelium | 7.31e-20 | 23 |
thymic region | 7.31e-20 | 23 |
pharyngeal gland | 7.31e-20 | 23 |
entire pharyngeal arch endoderm | 7.31e-20 | 23 |
thymus primordium | 7.31e-20 | 23 |
early pharyngeal endoderm | 7.31e-20 | 23 |
pharynx | 5.16e-19 | 24 |
gland of gut | 5.16e-19 | 24 |
upper respiratory tract | 5.16e-19 | 24 |
chordate pharynx | 5.16e-19 | 24 |
pharyngeal arch system | 5.16e-19 | 24 |
pharyngeal region of foregut | 5.16e-19 | 24 |
segment of respiratory tract | 7.63e-17 | 27 |
hemopoietic organ | 1.21e-15 | 29 |
immune organ | 1.21e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 7.27e-13 | 35 |
craniocervical region | 1.72e-12 | 36 |
hemolymphoid system | 1.23e-11 | 48 |
immune system | 1.23e-11 | 48 |
respiratory tract | 6.81e-11 | 41 |
respiratory system | 1.28e-10 | 42 |
anterior region of body | 2.34e-10 | 43 |
hematopoietic system | 7.21e-10 | 45 |
blood island | 7.21e-10 | 45 |
lymph node | 2.06e-08 | 1 |
axillary lymph node | 2.06e-08 | 1 |
peripheral lymph node | 2.06e-08 | 1 |
shoulder | 2.06e-08 | 1 |
gut epithelium | 5.95e-08 | 55 |
endocrine gland | 3.13e-07 | 60 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.