FFCP PHASE1:Hg19::chrX:64917108..64917119,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C89|description=CAGE_peak_at_chrX:64917108..64917119,+|id=chrX:64917108..64917119,+|ontology_enrichment_celltype=CL:0000838!2.15e-11!52;CL:0000542!4.32e-11!53;CL:0000051!4.32e-11!53;CL:0000945!1.26e-10!24;CL:0000826!1.26e-10!24;CL:0000037!2.40e-10!172;CL:0000566!2.40e-10!172;CL:0002032!2.76e-10!165;CL:0000837!2.76e-10!165;CL:0000988!2.80e-09!182;CL:0000817!5.10e-09!3|ontology_enrichment_celltype_v019=CL:0000785;2.78e-26;1!CL:0000819;2.78e-26;1!CL:0000817;4.61e-26;1!CL:0002127;9.79e-26;1!CL:0000911;9.79e-26;1!CL:0000814;9.79e-26;1!CL:0000236;1.17e-08;13!CL:0000542;3.00e-07;53|ontology_enrichment_celltype_v019_2=CL:0000817,4.66e-34,3;CL:0000819,2.78e-26,1;CL:0002127,7.62e-26,1;CL:0000914,7.62e-26,1;CL:0000911,7.62e-26,1;CL:0000814,7.62e-26,1;CL:0002042,7.62e-26,1;CL:0002039,7.62e-26,1;CL:0002040,7.62e-26,1;CL:0002041,7.62e-26,1;CL:0000785,7.30e-14,2;CL:0000955,7.30e-14,2;CL:0000818,7.30e-14,2;CL:0000954,7.30e-14,2;CL:0000816,7.30e-14,2;CL:0000893,1.21e-13,2;CL:0002489,1.21e-13,2;CL:0000809,1.21e-13,2;CL:0000808,1.21e-13,2;CL:0000894,1.21e-13,2;CL:0000806,1.21e-13,2;CL:0000807,1.21e-13,2;CL:0000805,1.21e-13,2;CL:0002425,1.21e-13,2;CL:0000236,4.19e-08,14;CL:0000838,4.81e-08,52;CL:0000542,6.71e-08,53;CL:0000051,6.71e-08,53|ontology_enrichment_development_v019=CL:0000954;7.30e-14;2!CL:0002425;1.37e-13;2!CL:0000051;3.00e-07;53|ontology_enrichment_disease=DOID:2531!1.33e-32!51;DOID:0060083!1.33e-32!51;DOID:1240!5.66e-24!39;DOID:8692!2.02e-17!31;DOID:0060058!4.62e-12!10;DOID:0050686!2.20e-11!137;DOID:162!8.95e-07!235|ontology_enrichment_disease_v019=DOID:0060073;2.78e-26;1!DOID:8675;2.78e-26;1!DOID:2531;6.90e-14;51!DOID:0060083;6.90e-14;51!DOID:1240;7.10e-12;39!DOID:5409;1.31e-07;4|ontology_enrichment_disease_v019_2=DOID:0060073,2.78e-26,1;DOID:8675,2.78e-26,1;DOID:2531,1.60e-17,51;DOID:0060083,1.60e-17,51;DOID:1240,5.03e-16,39;DOID:0050686,8.52e-09,137;DOID:5409,1.31e-07,4|ontology_enrichment_uberon=UBERON:0004177!1.31e-12!7;UBERON:0002370!1.51e-10!4;UBERON:0005058!1.51e-10!4;UBERON:0009113!1.51e-10!4;UBERON:0003295!1.51e-10!4;UBERON:0005562!1.51e-10!4;UBERON:0003351!5.21e-07!6|ontology_enrichment_uberon_v019=UBERON:0002346;1.59e-07;4!UBERON:0000923;1.59e-07;4!UBERON:0010316;1.59e-07;4!UBERON:0005291;1.59e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.80e-07,4;UBERON:0005058,1.80e-07,4;UBERON:0009113,1.80e-07,4;UBERON:0003295,1.80e-07,4;UBERON:0005562,1.80e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.46480320348181,0.995184627411951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59684583357601,0.213425530045242,0.318852545457645,1.1974762285969,0,0.423347165447766,0,0.561594356226918,0.228234679033192,0.313359791546046,0,2.37008488922245,0.1605880751037,0,0,0,0.307240764308458,0.671028323677248,0.667396566847634,0.586164286206121,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0,0,0,0,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,4.56136973039165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0.360299883542404,0,0,0,0,0,0.508039992394707,0,0,0.482259445395058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.553394539744923,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.746842107858986,0,0,0,0,0,0,0,0,0,2.7157204792644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.345701962667338,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9926903729199,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chrX:64917108..64917119,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_at_chrX:64917108..64917119,+ | |||
|id=chrX:64917108..64917119,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.15e-11!52;CL:0000542!4.32e-11!53;CL:0000051!4.32e-11!53;CL:0000945!1.26e-10!24;CL:0000826!1.26e-10!24;CL:0000037!2.40e-10!172;CL:0000566!2.40e-10!172;CL:0002032!2.76e-10!165;CL:0000837!2.76e-10!165;CL:0000988!2.80e-09!182;CL:0000817!5.10e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.78e-26;1!CL:0000819;2.78e-26;1!CL:0000817;4.61e-26;1!CL:0002127;9.79e-26;1!CL:0000911;9.79e-26;1!CL:0000814;9.79e-26;1!CL:0000236;1.17e-08;13!CL:0000542;3.00e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,4.66e-34,3;CL:0000819,2.78e-26,1;CL:0002127,7.62e-26,1;CL:0000914,7.62e-26,1;CL:0000911,7.62e-26,1;CL:0000814,7.62e-26,1;CL:0002042,7.62e-26,1;CL:0002039,7.62e-26,1;CL:0002040,7.62e-26,1;CL:0002041,7.62e-26,1;CL:0000785,7.30e-14,2;CL:0000955,7.30e-14,2;CL:0000818,7.30e-14,2;CL:0000954,7.30e-14,2;CL:0000816,7.30e-14,2;CL:0000893,1.21e-13,2;CL:0002489,1.21e-13,2;CL:0000809,1.21e-13,2;CL:0000808,1.21e-13,2;CL:0000894,1.21e-13,2;CL:0000806,1.21e-13,2;CL:0000807,1.21e-13,2;CL:0000805,1.21e-13,2;CL:0002425,1.21e-13,2;CL:0000236,4.19e-08,14;CL:0000838,4.81e-08,52;CL:0000542,6.71e-08,53;CL:0000051,6.71e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000954;7.30e-14;2!CL:0002425;1.37e-13;2!CL:0000051;3.00e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!1.33e-32!51;DOID:0060083!1.33e-32!51;DOID:1240!5.66e-24!39;DOID:8692!2.02e-17!31;DOID:0060058!4.62e-12!10;DOID:0050686!2.20e-11!137;DOID:162!8.95e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.78e-26;1!DOID:8675;2.78e-26;1!DOID:2531;6.90e-14;51!DOID:0060083;6.90e-14;51!DOID:1240;7.10e-12;39!DOID:5409;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.78e-26,1;DOID:8675,2.78e-26,1;DOID:2531,1.60e-17,51;DOID:0060083,1.60e-17,51;DOID:1240,5.03e-16,39;DOID:0050686,8.52e-09,137;DOID:5409,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.31e-12!7;UBERON:0002370!1.51e-10!4;UBERON:0005058!1.51e-10!4;UBERON:0009113!1.51e-10!4;UBERON:0003295!1.51e-10!4;UBERON:0005562!1.51e-10!4;UBERON:0003351!5.21e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.59e-07;4!UBERON:0000923;1.59e-07;4!UBERON:0010316;1.59e-07;4!UBERON:0005291;1.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.80e-07,4;UBERON:0005058,1.80e-07,4;UBERON:0009113,1.80e-07,4;UBERON:0003295,1.80e-07,4;UBERON:0005562,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.46480320348181,0.995184627411951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59684583357601,0.213425530045242,0.318852545457645,1.1974762285969,0,0.423347165447766,0,0.561594356226918,0.228234679033192,0.313359791546046,0,2.37008488922245,0.1605880751037,0,0,0,0.307240764308458,0.671028323677248,0.667396566847634,0.586164286206121,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0,0,0,0,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,4.56136973039165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0.360299883542404,0,0,0,0,0,0.508039992394707,0,0,0.482259445395058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.553394539744923,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.746842107858986,0,0,0,0,0,0,0,0,0,2.7157204792644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.345701962667338,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9926903729199,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chrX:64917108..64917119,+ | |||
}} |
Revision as of 12:21, 14 September 2013
Short description: | p@chrX:64917108..64917119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:64917108..64917119, + |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 4.66e-34 | 3 |
B-1 B cell | 2.78e-26 | 1 |
innate effector T cell | 7.62e-26 | 1 |
immature NK T cell | 7.62e-26 | 1 |
effector T cell | 7.62e-26 | 1 |
mature NK T cell | 7.62e-26 | 1 |
immature NK T cell stage IV | 7.62e-26 | 1 |
immature NK T cell stage I | 7.62e-26 | 1 |
immature NK T cell stage II | 7.62e-26 | 1 |
immature NK T cell stage III | 7.62e-26 | 1 |
mature B cell | 7.30e-14 | 2 |
pre-B-II cell | 7.30e-14 | 2 |
transitional stage B cell | 7.30e-14 | 2 |
small pre-B-II cell | 7.30e-14 | 2 |
immature B cell | 7.30e-14 | 2 |
thymocyte | 1.21e-13 | 2 |
double negative thymocyte | 1.21e-13 | 2 |
double-positive, alpha-beta thymocyte | 1.21e-13 | 2 |
DN4 thymocyte | 1.21e-13 | 2 |
DN1 thymic pro-T cell | 1.21e-13 | 2 |
DN2 thymocyte | 1.21e-13 | 2 |
DN3 thymocyte | 1.21e-13 | 2 |
immature single positive thymocyte | 1.21e-13 | 2 |
early T lineage precursor | 1.21e-13 | 2 |
B cell | 4.19e-08 | 14 |
lymphoid lineage restricted progenitor cell | 4.81e-08 | 52 |
lymphocyte | 6.71e-08 | 53 |
common lymphoid progenitor | 6.71e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.80e-07 | 4 |
hemolymphoid system gland | 1.80e-07 | 4 |
thymic region | 1.80e-07 | 4 |
pharyngeal gland | 1.80e-07 | 4 |
thymus primordium | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.78e-26 | 1 |
lymphosarcoma | 2.78e-26 | 1 |
hematologic cancer | 1.60e-17 | 51 |
immune system cancer | 1.60e-17 | 51 |
leukemia | 5.03e-16 | 39 |
organ system cancer | 8.52e-09 | 137 |
lung small cell carcinoma | 1.31e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.