FFCP PHASE1:Mm9::chr7:31204787..31204795,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23900|HGNC=|MCL_coexpression_id=3|UniProt=Q9QUJ0|association_with_transcript=76bp_to_ENSMUST00000079384_5end|description=CAGE_peak_2_at_Hcst_5end|id=chr7:31204787..31204795,-|ontology_enrichment_celltype=CL:0000988!2.43e-11!32;CL:0002032!2.43e-11!32;CL:0000037!2.43e-11!32;CL:0000566!2.43e-11!32;CL:0000837!2.43e-11!32;CL:0000791!7.12e-11!9;CL:0000789!7.12e-11!9;CL:0002420!7.12e-11!9;CL:0002419!7.12e-11!9;CL:0000790!7.12e-11!9;CL:0000838!4.79e-10!12;CL:0000542!3.68e-09!13;CL:0000051!3.68e-09!13;CL:0000624!4.87e-09!8;CL:0000084!1.10e-08!11;CL:0000827!1.10e-08!11;CL:0000893!1.39e-08!6;CL:0002489!1.39e-08!6;CL:0000898!1.39e-08!6;CL:0000809!1.39e-08!6;CL:0000810!1.39e-08!6;CL:0000895!1.39e-08!6;CL:0000808!1.39e-08!6;CL:0000894!1.39e-08!6;CL:0000806!1.39e-08!6;CL:0000807!1.39e-08!6;CL:0000805!1.39e-08!6;CL:0002425!1.39e-08!6;CL:0002436!1.39e-08!6;CL:0002427!1.39e-08!6;CL:0002428!1.39e-08!6;CL:0002429!1.39e-08!6;CL:0002433!1.39e-08!6;CL:0002431!1.39e-08!6;CL:0002432!1.39e-08!6;CL:0000738!1.79e-08!17;CL:0002087!1.79e-08!17;CL:0002031!6.26e-08!25;CL:0002320!7.83e-07!46;CL:0000134!7.83e-07!46|ontology_enrichment_celltype_v019_2=CL:0000625,1.03e-09,1;CL:0000355,1.46e-09,9;CL:0000791,3.45e-09,9;CL:0000789,3.45e-09,9;CL:0002420,3.45e-09,9;CL:0002419,3.45e-09,9;CL:0000790,3.45e-09,9;CL:0000084,1.27e-07,11;CL:0000827,1.27e-07,11;CL:0000838,4.93e-07,12|ontology_enrichment_disease=DOID:0060100!5.37e-08!3;DOID:4045!5.37e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.53e-27,3;DOID:4045,2.53e-27,3;DOID:0050686,4.99e-14,6|ontology_enrichment_uberon=UBERON:0002390!6.44e-09!45;UBERON:0003061!6.44e-09!45;UBERON:0004177!1.20e-08!29;UBERON:0002193!4.06e-08!48;UBERON:0002384!7.83e-07!46;UBERON:0002405!8.32e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.83025338797167,4.21316147379588,0,0.0797721589953364,0.171200729931206,0.437102012094987,0,0.202475267389826,0,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,12.1374172913703,9.37602413428561,11.5175223674236,16.4704816648684,18.442228093878,8.73918635456076,0,0,0,0,0,0,0,0,0,0.167782606057736,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Hcst}} | ||
|EntrezGene=23900 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q9QUJ0 | |||
|association_with_transcript=76bp_to_ENSMUST00000079384_5end | |||
|description=CAGE_peak_2_at_Hcst_5end | |||
|id=chr7:31204787..31204795,- | |||
|ontology_enrichment_celltype=CL:0000988!2.43e-11!32;CL:0002032!2.43e-11!32;CL:0000037!2.43e-11!32;CL:0000566!2.43e-11!32;CL:0000837!2.43e-11!32;CL:0000791!7.12e-11!9;CL:0000789!7.12e-11!9;CL:0002420!7.12e-11!9;CL:0002419!7.12e-11!9;CL:0000790!7.12e-11!9;CL:0000838!4.79e-10!12;CL:0000542!3.68e-09!13;CL:0000051!3.68e-09!13;CL:0000624!4.87e-09!8;CL:0000084!1.10e-08!11;CL:0000827!1.10e-08!11;CL:0000893!1.39e-08!6;CL:0002489!1.39e-08!6;CL:0000898!1.39e-08!6;CL:0000809!1.39e-08!6;CL:0000810!1.39e-08!6;CL:0000895!1.39e-08!6;CL:0000808!1.39e-08!6;CL:0000894!1.39e-08!6;CL:0000806!1.39e-08!6;CL:0000807!1.39e-08!6;CL:0000805!1.39e-08!6;CL:0002425!1.39e-08!6;CL:0002436!1.39e-08!6;CL:0002427!1.39e-08!6;CL:0002428!1.39e-08!6;CL:0002429!1.39e-08!6;CL:0002433!1.39e-08!6;CL:0002431!1.39e-08!6;CL:0002432!1.39e-08!6;CL:0000738!1.79e-08!17;CL:0002087!1.79e-08!17;CL:0002031!6.26e-08!25;CL:0002320!7.83e-07!46;CL:0000134!7.83e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.03e-09,1;CL:0000355,1.46e-09,9;CL:0000791,3.45e-09,9;CL:0000789,3.45e-09,9;CL:0002420,3.45e-09,9;CL:0002419,3.45e-09,9;CL:0000790,3.45e-09,9;CL:0000084,1.27e-07,11;CL:0000827,1.27e-07,11;CL:0000838,4.93e-07,12 | |||
|ontology_enrichment_disease=DOID:0060100!5.37e-08!3;DOID:4045!5.37e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.53e-27,3;DOID:4045,2.53e-27,3;DOID:0050686,4.99e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.44e-09!45;UBERON:0003061!6.44e-09!45;UBERON:0004177!1.20e-08!29;UBERON:0002193!4.06e-08!48;UBERON:0002384!7.83e-07!46;UBERON:0002405!8.32e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.46e-09,9;UBERON:0002036,1.46e-09,9;UBERON:0002385,1.46e-09,9;UBERON:0000486,1.46e-09,9;UBERON:0007503,1.46e-09,9;UBERON:0001015,1.46e-09,9;UBERON:0002329,1.46e-09,9;UBERON:0003082,1.46e-09,9;UBERON:0003059,1.46e-09,9;UBERON:0007282,1.46e-09,9;UBERON:0004290,1.46e-09,9;UBERON:0009618,1.46e-09,9;UBERON:0000383,1.16e-08,10;UBERON:0007524,6.32e-08,11;UBERON:0003077,6.32e-08,11;UBERON:0007285,6.32e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.83025338797167,4.21316147379588,0,0.0797721589953364,0.171200729931206,0.437102012094987,0,0.202475267389826,0,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,12.1374172913703,9.37602413428561,11.5175223674236,16.4704816648684,18.442228093878,8.73918635456076,0,0,0,0,0,0,0,0,0,0.167782606057736,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Hcst | |||
}} |
Revision as of 13:12, 14 September 2013
Short description: | p2@Hcst |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hcst_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 76bp_to_ENSMUST00000079384_5end |
EntrezGene: | Hcst |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.03e-09 | 1 |
multi-potent skeletal muscle stem cell | 1.46e-09 | 9 |
mature alpha-beta T cell | 3.45e-09 | 9 |
alpha-beta T cell | 3.45e-09 | 9 |
immature T cell | 3.45e-09 | 9 |
mature T cell | 3.45e-09 | 9 |
immature alpha-beta T cell | 3.45e-09 | 9 |
T cell | 1.27e-07 | 11 |
pro-T cell | 1.27e-07 | 11 |
lymphoid lineage restricted progenitor cell | 4.93e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.46e-09 | 9 |
striated muscle tissue | 1.46e-09 | 9 |
muscle tissue | 1.46e-09 | 9 |
multilaminar epithelium | 1.46e-09 | 9 |
epithelial vesicle | 1.46e-09 | 9 |
musculature | 1.46e-09 | 9 |
somite | 1.46e-09 | 9 |
myotome | 1.46e-09 | 9 |
presomitic mesoderm | 1.46e-09 | 9 |
presumptive segmental plate | 1.46e-09 | 9 |
dermomyotome | 1.46e-09 | 9 |
trunk paraxial mesoderm | 1.46e-09 | 9 |
musculature of body | 1.16e-08 | 10 |
dense mesenchyme tissue | 6.32e-08 | 11 |
paraxial mesoderm | 6.32e-08 | 11 |
presumptive paraxial mesoderm | 6.32e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.53e-27 | 3 |
muscle cancer | 2.53e-27 | 3 |
organ system cancer | 4.99e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.