FFCP PHASE1:Mm9::chr8:11006242..11006246,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=310|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:11006242..11006246,-|id=chr8:11006242..11006246,-|ontology_enrichment_celltype=CL:0002453!4.54e-13!8;CL:0000333!3.60e-10!10;CL:0000095!3.60e-10!10;CL:0000243!3.60e-10!10;CL:0000123!3.60e-10!10;CL:0000125!3.60e-10!10;CL:0000030!3.60e-10!10;CL:0000339!3.60e-10!10;CL:0000128!2.57e-09!6;CL:0000126!2.57e-09!6;CL:0000127!2.57e-09!6|ontology_enrichment_celltype_v019_2=CL:0002453,2.24e-66,8;CL:0000333,3.55e-53,10;CL:0000095,3.55e-53,10;CL:0000243,3.55e-53,10;CL:0000123,3.55e-53,10;CL:0000125,3.55e-53,10;CL:0000030,3.55e-53,10;CL:0000339,3.55e-53,10;CL:0000128,1.19e-45,6;CL:0000126,1.19e-45,6;CL:0000127,1.19e-45,6;CL:0000878,1.40e-22,2;CL:0002605,1.40e-22,2;CL:0000129,1.40e-22,2;CL:0002604,1.40e-22,2;CL:0002319,1.80e-12,43;CL:0000221,3.45e-12,44;CL:0000133,3.45e-12,44;CL:0002194,8.11e-12,4;CL:0000766,8.11e-12,4;CL:0000234,8.11e-12,4;CL:0000576,8.11e-12,4;CL:0000235,8.11e-12,4;CL:0000864,8.11e-12,4;CL:0002009,8.11e-12,4;CL:0000040,8.11e-12,4;CL:0000559,8.11e-12,4;CL:0000219,6.33e-10,54;CL:0002321,1.24e-07,70;CL:0000473,3.77e-07,7;CL:0000557,3.77e-07,7;CL:0002603,6.68e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.59e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001954,3.77e-07,7;UBERON:0003022,3.77e-07,7;UBERON:0002421,3.77e-07,7;UBERON:0000349,3.77e-07,7;UBERON:0002600,3.77e-07,7;UBERON:0001016,4.09e-07,75;UBERON:0001911,8.63e-07,2;UBERON:0000076,8.63e-07,2;UBERON:0005333,8.63e-07,2;UBERON:0008425,8.63e-07,2;UBERON:0005311,8.63e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,1.31811709640683,1.36100929351998,1.25987779462826,5.75010257459886,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,2.39680088414724,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.690739927463582,0.144649058581512,0,0,1.47529281905711,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.360586348559907,0,0.201932899896295,0.228620419965,0.604957110821043,0.0974578807397524,0.384847366561318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.382576664137687,0,0|short_description=p@chr8:11006242..11006246,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=310 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:11006242..11006246,- | |||
|id=chr8:11006242..11006246,- | |||
|ontology_enrichment_celltype=CL:0002453!4.54e-13!8;CL:0000333!3.60e-10!10;CL:0000095!3.60e-10!10;CL:0000243!3.60e-10!10;CL:0000123!3.60e-10!10;CL:0000125!3.60e-10!10;CL:0000030!3.60e-10!10;CL:0000339!3.60e-10!10;CL:0000128!2.57e-09!6;CL:0000126!2.57e-09!6;CL:0000127!2.57e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.24e-66,8;CL:0000333,3.55e-53,10;CL:0000095,3.55e-53,10;CL:0000243,3.55e-53,10;CL:0000123,3.55e-53,10;CL:0000125,3.55e-53,10;CL:0000030,3.55e-53,10;CL:0000339,3.55e-53,10;CL:0000128,1.19e-45,6;CL:0000126,1.19e-45,6;CL:0000127,1.19e-45,6;CL:0000878,1.40e-22,2;CL:0002605,1.40e-22,2;CL:0000129,1.40e-22,2;CL:0002604,1.40e-22,2;CL:0002319,1.80e-12,43;CL:0000221,3.45e-12,44;CL:0000133,3.45e-12,44;CL:0002194,8.11e-12,4;CL:0000766,8.11e-12,4;CL:0000234,8.11e-12,4;CL:0000576,8.11e-12,4;CL:0000235,8.11e-12,4;CL:0000864,8.11e-12,4;CL:0002009,8.11e-12,4;CL:0000040,8.11e-12,4;CL:0000559,8.11e-12,4;CL:0000219,6.33e-10,54;CL:0002321,1.24e-07,70;CL:0000473,3.77e-07,7;CL:0000557,3.77e-07,7;CL:0002603,6.68e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.59e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001954,3.77e-07,7;UBERON:0003022,3.77e-07,7;UBERON:0002421,3.77e-07,7;UBERON:0000349,3.77e-07,7;UBERON:0002600,3.77e-07,7;UBERON:0001016,4.09e-07,75;UBERON:0001911,8.63e-07,2;UBERON:0000076,8.63e-07,2;UBERON:0005333,8.63e-07,2;UBERON:0008425,8.63e-07,2;UBERON:0005311,8.63e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,1.31811709640683,1.36100929351998,1.25987779462826,5.75010257459886,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,2.39680088414724,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.690739927463582,0.144649058581512,0,0,1.47529281905711,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.360586348559907,0,0.201932899896295,0.228620419965,0.604957110821043,0.0974578807397524,0.384847366561318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr8:11006242..11006246,- | |||
}} |
Revision as of 14:41, 14 September 2013
Short description: | p@chr8:11006242..11006246, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:11006242..11006246, - |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.24e-66 | 8 |
migratory neural crest cell | 3.55e-53 | 10 |
neuron associated cell | 3.55e-53 | 10 |
glial cell (sensu Vertebrata) | 3.55e-53 | 10 |
neuron associated cell (sensu Vertebrata) | 3.55e-53 | 10 |
glial cell | 3.55e-53 | 10 |
glioblast | 3.55e-53 | 10 |
glioblast (sensu Vertebrata) | 3.55e-53 | 10 |
oligodendrocyte | 1.19e-45 | 6 |
macroglial cell | 1.19e-45 | 6 |
astrocyte | 1.19e-45 | 6 |
central nervous system macrophage | 1.40e-22 | 2 |
astrocyte of the cerebral cortex | 1.40e-22 | 2 |
microglial cell | 1.40e-22 | 2 |
astrocyte of the hippocampus | 1.40e-22 | 2 |
neural cell | 1.80e-12 | 43 |
ectodermal cell | 3.45e-12 | 44 |
neurectodermal cell | 3.45e-12 | 44 |
monopoietic cell | 8.11e-12 | 4 |
myeloid leukocyte | 8.11e-12 | 4 |
phagocyte | 8.11e-12 | 4 |
monocyte | 8.11e-12 | 4 |
macrophage | 8.11e-12 | 4 |
tissue-resident macrophage | 8.11e-12 | 4 |
macrophage dendritic cell progenitor | 8.11e-12 | 4 |
monoblast | 8.11e-12 | 4 |
promonocyte | 8.11e-12 | 4 |
motile cell | 6.33e-10 | 54 |
embryonic cell | 1.24e-07 | 70 |
defensive cell | 3.77e-07 | 7 |
granulocyte monocyte progenitor cell | 3.77e-07 | 7 |
astrocyte of the cerebellum | 6.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.59e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Ammon's horn | 3.77e-07 | 7 |
lobe parts of cerebral cortex | 3.77e-07 | 7 |
hippocampal formation | 3.77e-07 | 7 |
limbic system | 3.77e-07 | 7 |
limbic lobe | 3.77e-07 | 7 |
nervous system | 4.09e-07 | 75 |
mammary gland | 8.63e-07 | 2 |
external ectoderm | 8.63e-07 | 2 |
mammary bud | 8.63e-07 | 2 |
mammary ridge | 8.63e-07 | 2 |
mammary placode | 8.63e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.