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FFCP PHASE1:Mm9::chr8:94881639..94881650,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=54352|HGNC=|UniProt=Q9JKQ4|association_with_transcript=-44bp_to_ENSMUST00000034184,NM_018826,uc009mub.1_5end|description=CAGE_peak_5_at_Irx5_5end|id=chr8:94881639..94881650,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000120,3.46e-08,3;CL:0002293,3.46e-08,3;CL:0000068,7.68e-07,3;CL:0002202,7.68e-07,3;CL:0000069,7.68e-07,3;CL:0002632,7.68e-07,3;CL:0002368,7.68e-07,3;CL:0000307,7.68e-07,3;CL:0000377,7.68e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.90e-12!17;UBERON:0005181!2.90e-12!17;UBERON:0002224!2.90e-12!17;UBERON:0000915!2.90e-12!17;UBERON:0008947!2.90e-12!17;UBERON:0003258!2.90e-12!17;UBERON:0005153!6.60e-12!17;UBERON:0005085!8.74e-11!13;UBERON:0002048!2.83e-10!14;UBERON:0000117!2.83e-10!14;UBERON:0000171!2.83e-10!14;UBERON:0000170!2.83e-10!14;UBERON:0005597!2.83e-10!14;UBERON:0000118!2.83e-10!14;UBERON:0000020!5.83e-08!12;UBERON:0001032!5.83e-08!12;UBERON:0004456!5.83e-08!12;UBERON:0000970!1.45e-07!9;UBERON:0000019!1.45e-07!9;UBERON:0000047!1.45e-07!9;UBERON:0004088!1.45e-07!9;UBERON:0002104!1.45e-07!9;UBERON:0001456!1.45e-07!9;UBERON:0003072!1.45e-07!9;UBERON:0003071!1.45e-07!9;UBERON:0004128!1.45e-07!9;UBERON:0001444!4.00e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005085,2.03e-23,13;UBERON:0000033,5.61e-19,13;UBERON:0000020,3.59e-17,12;UBERON:0001032,3.59e-17,12;UBERON:0004456,3.59e-17,12;UBERON:0001444,5.92e-15,11;UBERON:0000970,8.37e-15,9;UBERON:0000019,8.37e-15,9;UBERON:0000047,8.37e-15,9;UBERON:0010312,8.37e-15,9;UBERON:0004088,8.37e-15,9;UBERON:0002104,8.37e-15,9;UBERON:0001456,8.37e-15,9;UBERON:0003072,8.37e-15,9;UBERON:0004128,8.37e-15,9;UBERON:0003071,8.37e-15,9;UBERON:0005178,4.20e-12,17;UBERON:0005181,4.20e-12,17;UBERON:0002224,4.20e-12,17;UBERON:0000915,4.20e-12,17;UBERON:0008947,4.20e-12,17;UBERON:0003258,4.20e-12,17;UBERON:0000153,2.01e-11,43;UBERON:0001048,9.22e-11,134;UBERON:0005153,2.00e-10,17;UBERON:0007811,1.61e-09,36;UBERON:0005157,1.37e-08,20;UBERON:0001004,5.07e-08,42;UBERON:0002048,8.12e-08,14;UBERON:0000117,8.12e-08,14;UBERON:0000171,8.12e-08,14;UBERON:0000170,8.12e-08,14;UBERON:0005597,8.12e-08,14;UBERON:0000118,8.12e-08,14;UBERON:0000065,4.42e-07,41;UBERON:0003126,7.68e-07,3;UBERON:0001005,7.68e-07,3;UBERON:0007196,7.68e-07,3;UBERON:0001558,7.68e-07,3|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,2.02316460859598,1.5869729378161,1.90149421051854,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,1.31886287730194,0.548925861614458,1.04182674111352,0.279182999001381,1.68828783009504,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0.681721290312231,0.519572009205738,0.70667914902068,1.40843419776681,1.28326477414318,2.54805239706646,7.11066703153331,1.08245520505607,1.52015919285059,1.01104889002957,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0.247194967734374,0,0,1.13236794963186,1.10420759230197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,1.05220927943237,1.43132487258974,1.14951052216736,1.0803727788321,0.60281927134286,1.2246569847239,2.43416068541215,1.78033276663485,1.55222022443409,0.215567992932842,1.51284864134255,1.05570674498369,1.09597866213787,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,1.24275463521301,0.703578179943289,0.36012412292203,0.946978942340841,0.393528463494808,0.308534225774757,0.232533944750408,0,0,0.493679549740441,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.420814919341911,0.632365371242573,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.757965647081939,0.814824882210129,1.35796068620151,2.81628297946203,1.84256883185997,2.61848004974615,1.56106918286239,0.472905432318573,0.8858587585951,2.55127629851979,0.491589944147214,0.863424909329478,1.44649058581512,0,0,3.44234991113325,1.65562047782839,0,0.35163505977661,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0.32977250588296,1.45317984026315,0.482503399425247,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0,0,0.209088296014469,0.436725127492355,0.539457385539283,0.0826534557253359,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,0.919217542250071,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.192075457214608,0.287177344778066,0,0.463537303779422,0.578727661391115,0.412085900803307,0,0,0.177475806159338,0.715308569841963,0.145346416632329,0.376437521661322,0.423073039458382,0,0.263069711437843,0.271608227691724,0.561142271657738,0.949080144993393,0.29551344712669,0,0.154936841185966,0.385813221962283,0.499621155875892,0.233931608445408,0,0.382576664137687,0.882365676478062,0|short_description=p5@Irx5}}
|EntrezGene=54352
|HGNC=
|UniProt=Q9JKQ4
|association_with_transcript=-44bp_to_ENSMUST00000034184,NM_018826,uc009mub.1_5end
|description=CAGE_peak_5_at_Irx5_5end
|id=chr8:94881639..94881650,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000120,3.46e-08,3;CL:0002293,3.46e-08,3;CL:0000068,7.68e-07,3;CL:0002202,7.68e-07,3;CL:0000069,7.68e-07,3;CL:0002632,7.68e-07,3;CL:0002368,7.68e-07,3;CL:0000307,7.68e-07,3;CL:0000377,7.68e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!2.90e-12!17;UBERON:0005181!2.90e-12!17;UBERON:0002224!2.90e-12!17;UBERON:0000915!2.90e-12!17;UBERON:0008947!2.90e-12!17;UBERON:0003258!2.90e-12!17;UBERON:0005153!6.60e-12!17;UBERON:0005085!8.74e-11!13;UBERON:0002048!2.83e-10!14;UBERON:0000117!2.83e-10!14;UBERON:0000171!2.83e-10!14;UBERON:0000170!2.83e-10!14;UBERON:0005597!2.83e-10!14;UBERON:0000118!2.83e-10!14;UBERON:0000020!5.83e-08!12;UBERON:0001032!5.83e-08!12;UBERON:0004456!5.83e-08!12;UBERON:0000970!1.45e-07!9;UBERON:0000019!1.45e-07!9;UBERON:0000047!1.45e-07!9;UBERON:0004088!1.45e-07!9;UBERON:0002104!1.45e-07!9;UBERON:0001456!1.45e-07!9;UBERON:0003072!1.45e-07!9;UBERON:0003071!1.45e-07!9;UBERON:0004128!1.45e-07!9;UBERON:0001444!4.00e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0005085,2.03e-23,13;UBERON:0000033,5.61e-19,13;UBERON:0000020,3.59e-17,12;UBERON:0001032,3.59e-17,12;UBERON:0004456,3.59e-17,12;UBERON:0001444,5.92e-15,11;UBERON:0000970,8.37e-15,9;UBERON:0000019,8.37e-15,9;UBERON:0000047,8.37e-15,9;UBERON:0010312,8.37e-15,9;UBERON:0004088,8.37e-15,9;UBERON:0002104,8.37e-15,9;UBERON:0001456,8.37e-15,9;UBERON:0003072,8.37e-15,9;UBERON:0004128,8.37e-15,9;UBERON:0003071,8.37e-15,9;UBERON:0005178,4.20e-12,17;UBERON:0005181,4.20e-12,17;UBERON:0002224,4.20e-12,17;UBERON:0000915,4.20e-12,17;UBERON:0008947,4.20e-12,17;UBERON:0003258,4.20e-12,17;UBERON:0000153,2.01e-11,43;UBERON:0001048,9.22e-11,134;UBERON:0005153,2.00e-10,17;UBERON:0007811,1.61e-09,36;UBERON:0005157,1.37e-08,20;UBERON:0001004,5.07e-08,42;UBERON:0002048,8.12e-08,14;UBERON:0000117,8.12e-08,14;UBERON:0000171,8.12e-08,14;UBERON:0000170,8.12e-08,14;UBERON:0005597,8.12e-08,14;UBERON:0000118,8.12e-08,14;UBERON:0000065,4.42e-07,41;UBERON:0003126,7.68e-07,3;UBERON:0001005,7.68e-07,3;UBERON:0007196,7.68e-07,3;UBERON:0001558,7.68e-07,3
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,2.02316460859598,1.5869729378161,1.90149421051854,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,1.31886287730194,0.548925861614458,1.04182674111352,0.279182999001381,1.68828783009504,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0.681721290312231,0.519572009205738,0.70667914902068,1.40843419776681,1.28326477414318,2.54805239706646,7.11066703153331,1.08245520505607,1.52015919285059,1.01104889002957,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0.247194967734374,0,0,1.13236794963186,1.10420759230197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,1.05220927943237,1.43132487258974,1.14951052216736,1.0803727788321,0.60281927134286,1.2246569847239,2.43416068541215,1.78033276663485,1.55222022443409,0.215567992932842,1.51284864134255,1.05570674498369,1.09597866213787,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,1.24275463521301,0.703578179943289,0.36012412292203,0.946978942340841,0.393528463494808,0.308534225774757,0.232533944750408,0,0,0.493679549740441,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.420814919341911,0.632365371242573,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.757965647081939,0.814824882210129,1.35796068620151,2.81628297946203,1.84256883185997,2.61848004974615,1.56106918286239,0.472905432318573,0.8858587585951,2.55127629851979,0.491589944147214,0.863424909329478,1.44649058581512,0,0,3.44234991113325,1.65562047782839,0,0.35163505977661,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0.32977250588296,1.45317984026315,0.482503399425247,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0,0,0.209088296014469,0.436725127492355,0.539457385539283,0.0826534557253359,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,0.919217542250071,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.192075457214608,0.287177344778066,0,0.463537303779422,0.578727661391115,0.412085900803307,0,0,0.177475806159338,0.715308569841963,0.145346416632329,0.376437521661322,0.423073039458382,0,0.263069711437843,0.271608227691724,0.561142271657738,0.949080144993393,0.29551344712669,0,0.154936841185966,0.385813221962283,0.499621155875892,0.233931608445408,0,0.382576664137687,0.882365676478062,0
|short_description=p5@Irx5
}}

Revision as of 16:27, 14 September 2013

Short description:p5@Irx5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Irx5_5end
Coexpression cluster:NA
Association with transcript: -44bp_to_ENSMUST00000034184, NM_018826, uc009mub.1_5end
EntrezGene:Irx5
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Irx5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectodermal placode2.03e-2313
head5.61e-1913
sense organ3.59e-1712
sensory system3.59e-1712
entire sense organ system3.59e-1712
subdivision of head5.92e-1511
eye8.37e-159
camera-type eye8.37e-159
simple eye8.37e-159
immature eye8.37e-159
ocular region8.37e-159
visual system8.37e-159
face8.37e-159
optic cup8.37e-159
optic vesicle8.37e-159
eye primordium8.37e-159
thoracic cavity element4.20e-1217
thoracic segment organ4.20e-1217
thoracic cavity4.20e-1217
thoracic segment of trunk4.20e-1217
respiratory primordium4.20e-1217
endoderm of foregut4.20e-1217
anterior region of body2.01e-1143
primordium9.22e-11134
epithelial bud2.00e-1017
craniocervical region1.61e-0936
epithelial fold1.37e-0820
respiratory system5.07e-0842
lung8.12e-0814
respiratory tube8.12e-0814
respiration organ8.12e-0814
pair of lungs8.12e-0814
lung primordium8.12e-0814
lung bud8.12e-0814
respiratory tract4.42e-0741
trachea7.68e-073
respiratory airway7.68e-073
tracheobronchial tree7.68e-073
lower respiratory tract7.68e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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