FFCP PHASE1:Hg19::chr1:9299865..9299874,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9563 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4795 | |||
|TSSclassifier=strong | |||
|UniProt=O95479 | |||
|association_with_transcript=-28bp_to_CR749282_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_10_at_H6PD_5end | |||
|id=chr1:9299865..9299874,+ | |||
|ontology_enrichment_celltype=CL:0000990!4.86e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002195;7.62e-24;2!CL:0002571;7.62e-24;2!CL:0000840;2.55e-18;5!CL:0000990;2.02e-12;8!CL:0000451;2.90e-10;10!CL:0000182;1.32e-09;12!CL:0002554;3.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.22e-23,2;CL:0002571,1.22e-23,2;CL:0000840,2.33e-18,5;CL:0001029,2.33e-18,5;CL:0000990,1.91e-12,8;CL:0000451,2.76e-10,10;CL:0000182,1.30e-09,12;CL:0002554,3.48e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.01e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.34e-14!19;UBERON:0006925!7.34e-14!19;UBERON:0008836!7.34e-14!19;UBERON:0005057!1.20e-13!26;UBERON:0009854!9.52e-13!23;UBERON:0008835!1.78e-11!22;UBERON:0003894!1.78e-11!22;UBERON:0009856!7.98e-11!26;UBERON:0007499!1.12e-09!25;UBERON:0009497!1.12e-09!25;UBERON:0000015!1.12e-09!25;UBERON:0002423!1.12e-09!25;UBERON:0006235!1.12e-09!25;UBERON:0004161!1.12e-09!25;UBERON:0002368!5.15e-09!35;UBERON:0003929!1.17e-07!54;UBERON:0002365!3.70e-07!31;UBERON:0002330!3.70e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.75e-39;19!UBERON:0006925;8.75e-39;19!UBERON:0002423;2.59e-29;25!UBERON:0002365;3.49e-23;31!UBERON:0002330;3.49e-23;31!UBERON:0002368;5.51e-21;33!UBERON:0000949;7.30e-15;43!UBERON:0005172;4.70e-11;52!UBERON:0005173;4.70e-11;52!UBERON:0002530;4.26e-09;57!UBERON:0002417;7.41e-08;58!UBERON:0000916;7.41e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.91e-39,19;UBERON:0006925,9.91e-39,19;UBERON:0008836,9.91e-39,19;UBERON:0008835,2.34e-33,22;UBERON:0003894,2.34e-33,22;UBERON:0009854,7.06e-32,23;UBERON:0007499,2.85e-29,25;UBERON:0009497,2.85e-29,25;UBERON:0000015,2.85e-29,25;UBERON:0002423,2.85e-29,25;UBERON:0006235,2.85e-29,25;UBERON:0004161,2.85e-29,25;UBERON:0009856,4.06e-28,26;UBERON:0002365,1.83e-23,31;UBERON:0002330,1.83e-23,31;UBERON:0002368,1.07e-20,35;UBERON:0000949,6.38e-16,45;UBERON:0003929,3.95e-13,54;UBERON:0005172,3.95e-13,54;UBERON:0005173,3.95e-13,54;UBERON:0002530,6.03e-12,59;UBERON:0002417,9.86e-12,60;UBERON:0000916,9.86e-12,60;UBERON:0005911,2.38e-08,82;UBERON:0001041,8.09e-08,87 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,3.24547393654683,3.48259474598534,2.79211717089617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,2.73048408581408,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,13.9430538304014,10.8110993834539,8.86184860022106,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,1.00084595560703,1.08524321078289,0.823240336780769,0.325736184293735,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.328508624055237,0,0.232420756919918,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.435050081742686,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0,0.113942055847001,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.511164065356265,0,16.1207457045891,10.6005511129777,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.465788870628778,0.829412415681711,0.797525143673985,0,0,0.761610424337591,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65462722368366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0,0,0,0,0.431855182437243,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.339854229375634,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.12729431655633,0,0,0,0.26940821205835,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p10@H6PD | |||
}} |
Revision as of 16:12, 10 January 2014
Short description: | p10@H6PD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_H6PD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -28bp_to_CR749282_5end |
EntrezGene: | H6PD |
HGNC: | 4795 |
UniProt: | O95479 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.22e-23 | 2 |
hepatic mesenchymal stem cell | 1.22e-23 | 2 |
immature conventional dendritic cell | 2.33e-18 | 5 |
common dendritic progenitor | 2.33e-18 | 5 |
conventional dendritic cell | 1.91e-12 | 8 |
dendritic cell | 2.76e-10 | 10 |
hepatocyte | 1.30e-09 | 12 |
fibroblast of lymphatic vessel | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 9.91e-39 | 19 |
digestive gland | 9.91e-39 | 19 |
liver bud | 9.91e-39 | 19 |
hepatic diverticulum | 2.34e-33 | 22 |
liver primordium | 2.34e-33 | 22 |
digestive tract diverticulum | 7.06e-32 | 23 |
epithelial sac | 2.85e-29 | 25 |
epithelium of foregut-midgut junction | 2.85e-29 | 25 |
anatomical boundary | 2.85e-29 | 25 |
hepatobiliary system | 2.85e-29 | 25 |
foregut-midgut junction | 2.85e-29 | 25 |
septum transversum | 2.85e-29 | 25 |
sac | 4.06e-28 | 26 |
exocrine gland | 1.83e-23 | 31 |
exocrine system | 1.83e-23 | 31 |
endocrine gland | 1.07e-20 | 35 |
endocrine system | 6.38e-16 | 45 |
gut epithelium | 3.95e-13 | 54 |
abdomen element | 3.95e-13 | 54 |
abdominal segment element | 3.95e-13 | 54 |
gland | 6.03e-12 | 59 |
abdominal segment of trunk | 9.86e-12 | 60 |
abdomen | 9.86e-12 | 60 |
endo-epithelium | 2.38e-08 | 82 |
foregut | 8.09e-08 | 87 |