FFCP PHASE1:Hg19::chr1:94658920..94658925,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:94658920..94658925,- | |||
|id=chr1:94658920..94658925,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;3.44e-18;1!CL:0002372;3.44e-18;1!CL:0002149;6.00e-12;6!CL:0002255;6.00e-12;6!CL:0000322;6.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.16e-18,1;CL:0002372,3.16e-18,1;CL:0002149,7.08e-12,6;CL:0002255,7.08e-12,6;CL:0000322,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.02e-17;4!UBERON:0007284;2.02e-17;4!UBERON:0009847;8.62e-07;3!UBERON:0003353;8.62e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;6.00e-12;6!DOID:3910;9.06e-10;2!DOID:3307;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.08e-12,6;DOID:3910,9.46e-10,2;DOID:3307,1.03e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;7.19e-23;3!UBERON:0000946;7.19e-23;3!UBERON:0002146;8.72e-18;1!UBERON:0002134;8.72e-18;1!UBERON:0005208;8.72e-18;1!UBERON:0005623;8.72e-18;1!UBERON:0004145;8.72e-18;1!UBERON:0005946;8.72e-18;1!UBERON:0005965;8.72e-18;1!UBERON:0002078;8.72e-18;1!UBERON:0004903;9.06e-10;2!UBERON:0002173;9.06e-10;2!UBERON:0002186;9.06e-10;2!UBERON:0002081;1.44e-09;2!UBERON:0002133;1.44e-09;2!UBERON:0010313;1.57e-07;10!UBERON:0004821;6.32e-07;3!UBERON:0007499;6.32e-07;3!UBERON:0003215;6.32e-07;3!UBERON:0010368;6.32e-07;3!UBERON:0009911;6.32e-07;3!UBERON:0002299;6.32e-07;3!UBERON:0006524;6.32e-07;3!UBERON:0008874;6.32e-07;3!UBERON:0002169;6.32e-07;3!UBERON:0004894;6.32e-07;3!UBERON:0004151;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.00e-22,3;UBERON:0009751,1.00e-22,3;UBERON:0000946,1.00e-22,3;UBERON:0002523,1.00e-22,3;UBERON:0005983,1.00e-22,3;UBERON:0002165,1.00e-22,3;UBERON:0002062,1.00e-22,3;UBERON:0007280,1.00e-22,3;UBERON:0002134,1.03e-17,1;UBERON:0005208,1.03e-17,1;UBERON:0005946,1.03e-17,1;UBERON:0005965,1.03e-17,1;UBERON:0002078,1.03e-17,1;UBERON:0002146,1.22e-17,1;UBERON:0005623,1.22e-17,1;UBERON:0004797,2.58e-10,7;UBERON:0004903,9.46e-10,2;UBERON:0002173,9.46e-10,2;UBERON:0002186,9.46e-10,2;UBERON:0002081,1.57e-09,2;UBERON:0002133,1.57e-09,2;UBERON:0010227,1.57e-09,2;UBERON:0010313,1.73e-07,10;UBERON:0002342,1.73e-07,10;UBERON:0005062,1.73e-07,10;UBERON:0004821,6.50e-07,3;UBERON:0003215,6.50e-07,3;UBERON:0010368,6.50e-07,3;UBERON:0009911,6.50e-07,3;UBERON:0002299,6.50e-07,3;UBERON:0006524,6.50e-07,3;UBERON:0008874,6.50e-07,3;UBERON:0002169,6.50e-07,3;UBERON:0004894,6.50e-07,3;UBERON:0004151,9.12e-07,3;UBERON:0004145,9.12e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0.665188192387692,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0,0.367663080345869,0,0.357198913136319,0.673588117878509,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0.538842688278752,0.326923806226917,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0.280901613404497,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.245976877086227,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,2.85273810081437,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0.770243085573222,0.307007349452259,0.275673144969061,0.107420244868274,0.290033387828457,0.170453254832202,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0.140669416410513,0.222617410045812,0,7.17826387635178,0,0.276283915531148,0,0.102268682502155,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0.945550727071745,0,0,0,0,0.120596438625408,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,0.179515288819544,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,1.13843818411917,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0.859930162358083,0,0,0,0,0.529536760149002,0,0.274083849293502,0.397429223405979,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0.558564802544508,1.3749625440701,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0.575745591958336,0.714695326373367,0,0.5085370753095,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.37494122388632,0,0,0.705797459094515,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0.176689145945881,0.192914038270915,0,0.512483037175893,0,0.607719912354764,0,0,0.132864840313363,0,0,0.737318726261158,0.845248493434508,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0,0,0.781078098613847,0,0,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,1.66847102838104,0.156986185701028,0,0,0.913158720509496,0.215927591218621,0,0.0714765441766563,0,0.348724276104376,0,0,0,0,0,0,0.118332000730565,0,0,1.60374807980835,0,0.955538938977433,0.782988022584546,0,0,0,0,0,0.485710993059139,0,0,0,0,0.219881033490858,0.150962843566674,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,0,1.76447435857846,0.401206833445841,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0,0.0620747142958579,0.560659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| |||
|short_description=p@chr1:94658920..94658925,- | |||
}} |
Revision as of 19:38, 10 January 2014
Short description: | p@chr1:94658920..94658925, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94658920..94658925, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.16e-18 | 1 |
myotube | 3.16e-18 | 1 |
epithelial cell of uterus | 7.08e-12 | 6 |
stromal cell of endometrium | 7.08e-12 | 6 |
pneumocyte | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 1.00e-22 | 3 |
cardiac mesenchyme | 1.00e-22 | 3 |
cardial valve | 1.00e-22 | 3 |
tunica intima | 1.00e-22 | 3 |
heart layer | 1.00e-22 | 3 |
endocardium | 1.00e-22 | 3 |
endocardial cushion | 1.00e-22 | 3 |
presumptive endocardium | 1.00e-22 | 3 |
tricuspid valve | 1.03e-17 | 1 |
right atrium valve | 1.03e-17 | 1 |
outflow tract of atrium | 1.03e-17 | 1 |
outflow part of right atrium | 1.03e-17 | 1 |
right cardiac atrium | 1.03e-17 | 1 |
pulmonary valve | 1.22e-17 | 1 |
semi-lunar valve | 1.22e-17 | 1 |
blood vessel layer | 2.58e-10 | 7 |
bronchoalveolar duct junction | 9.46e-10 | 2 |
alveolar duct | 9.46e-10 | 2 |
bronchiole | 9.46e-10 | 2 |
cardiac atrium | 1.57e-09 | 2 |
atrioventricular valve | 1.57e-09 | 2 |
future cardiac atrium | 1.57e-09 | 2 |
neural crest-derived structure | 1.73e-07 | 10 |
neural crest | 1.73e-07 | 10 |
neural fold | 1.73e-07 | 10 |
pulmonary alveolus epithelium | 6.50e-07 | 3 |
alveolus | 6.50e-07 | 3 |
pulmonary lobule | 6.50e-07 | 3 |
lobule | 6.50e-07 | 3 |
alveolus of lung | 6.50e-07 | 3 |
alveolar system | 6.50e-07 | 3 |
pulmonary acinus | 6.50e-07 | 3 |
alveolar sac | 6.50e-07 | 3 |
alveolar wall | 6.50e-07 | 3 |
cardiac chamber | 9.12e-07 | 3 |
outflow tract | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.08e-12 | 6 |
lung adenocarcinoma | 9.46e-10 | 2 |
teratoma | 1.03e-09 | 2 |