FFCP PHASE1:Hg19::chr1:95005908..95005937,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C935 | |||
|description=CAGE_peak_at_chr1:95005908..95005937,- | |||
|id=chr1:95005908..95005937,- | |||
|ontology_enrichment_celltype=CL:0002076!4.31e-14!43;CL:0002368!7.94e-10!13;CL:0000066!2.34e-08!254;CL:0000223!1.26e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.29e-25;13!CL:0002076;1.43e-22;42!CL:0002202;3.89e-15;9!CL:0002632;3.89e-15;9!CL:0000244;3.99e-13;4!CL:0000731;3.99e-13;4!CL:0002621;2.16e-10;3!CL:0000307;1.11e-09;3!CL:0002159;2.05e-09;14!CL:0002328;2.08e-09;3!CL:0002251;1.24e-08;20!CL:0000362;9.31e-08;9!CL:0000240;1.52e-07;6!CL:0000311;1.52e-07;6!CL:0000079;1.52e-07;6!CL:0000237;1.52e-07;6!CL:0000317;4.90e-07;2!CL:1000448;4.90e-07;2!CL:0002308;4.90e-07;2!CL:0002140;4.90e-07;2!CL:0002327;9.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.64e-29,42;CL:0002368,1.08e-25,13;CL:0000223,1.97e-19,58;CL:0000066,8.08e-19,253;CL:0002202,2.36e-15,9;CL:0002632,2.36e-15,9;CL:0000244,4.56e-13,4;CL:0000731,4.56e-13,4;CL:0002621,2.32e-10,3;CL:0002328,7.51e-10,3;CL:0002159,1.71e-09,14;CL:0000068,2.22e-09,3;CL:0000069,2.22e-09,3;CL:0000307,2.22e-09,3;CL:0000377,2.22e-09,3;CL:0002251,1.26e-08,20;CL:0000362,8.32e-08,9;CL:0000240,1.21e-07,6;CL:0000311,1.21e-07,6;CL:0000079,1.21e-07,6;CL:0000237,1.21e-07,6;CL:0000036,1.21e-07,6;CL:0000357,1.21e-07,6;CL:0000114,1.21e-07,6;CL:0000317,7.25e-07,2;CL:1000448,7.25e-07,2;CL:0002308,7.25e-07,2;CL:0002140,7.25e-07,2;CL:0002327,8.47e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;5.73e-12;58!CL:0000377;1.11e-09;3!CL:0000357;1.52e-07;6!CL:0000114;1.52e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!5.24e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.69e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.18e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000062!2.58e-10!511;UBERON:0000468!6.53e-08!659;UBERON:0001004!1.32e-07!72;UBERON:0000467!1.44e-07!625;UBERON:0000480!1.83e-07!626;UBERON:0000475!5.29e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.34e-12;12!UBERON:0000365;1.72e-10;5!UBERON:0001949;2.16e-10;3!UBERON:0004815;2.08e-09;3!UBERON:0002031;2.08e-09;3!UBERON:0005911;2.22e-09;36!UBERON:0000344;9.25e-09;20!UBERON:0005910;9.94e-09;6!UBERON:0007196;1.20e-08;15!UBERON:0001558;1.20e-08;15!UBERON:0003729;4.27e-08;13!UBERON:0003929;1.25e-07;7!UBERON:0004807;2.21e-07;22!UBERON:0000485;4.37e-07;7!UBERON:0002419;4.90e-07;2!UBERON:0007771;4.90e-07;2!UBERON:0003297;4.90e-07;2!UBERON:0001821;4.90e-07;2!UBERON:0003487;4.90e-07;2!UBERON:0001820;4.90e-07;2!UBERON:0001911;9.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,7.69e-12,82;UBERON:0004119,1.88e-11,160;UBERON:0000925,1.88e-11,160;UBERON:0006595,1.88e-11,160;UBERON:0000365,1.92e-10,5;UBERON:0001949,2.32e-10,3;UBERON:0004815,7.51e-10,3;UBERON:0002031,7.51e-10,3;UBERON:0007196,9.03e-09,15;UBERON:0001558,9.03e-09,15;UBERON:0000344,1.04e-08,20;UBERON:0005910,1.08e-08,6;UBERON:0005153,1.36e-08,37;UBERON:0003729,5.21e-08,13;UBERON:0001004,1.54e-07,74;UBERON:0002419,7.25e-07,2;UBERON:0007771,7.25e-07,2;UBERON:0003297,7.25e-07,2;UBERON:0001821,7.25e-07,2;UBERON:0003487,7.25e-07,2;UBERON:0001820,7.25e-07,2;UBERON:0005089,7.25e-07,2;UBERON:0005088,7.25e-07,2;UBERON:0001911,8.47e-07,4;UBERON:0005333,8.47e-07,4;UBERON:0008425,8.47e-07,4;UBERON:0005311,8.47e-07,4 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,1.72013755551056,0,0.655324116390517,1.05506791291381,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,4.59710612239464,1.8072355126695,1.84877005083394,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,0.512321413058201,0.709446689665756,0.689491361473237,0,1.35426486594342,0,0,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,3.48251086354301,0.56738522469114,1.86846674698672,0,0.521482918420201,0.217188844705117,1.21079900526674,0.736555271975129,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,1.72852777344,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0,0,0,0.504867548488229,0.184099797284599,0,0,0.302256294682921,0.169560592310488,3.28543450377605,5.45492241181669,3.15485054927904,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,1.75600456653801,1.1240175325762,1.91005047582099,1.20364978706088,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,3.69560682037491,3.68615252830205,1.52249488594842,1.16253575405585,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,1.08524321078289,0,0,0.710783897485092,0.791951872933429,0,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,1.07057393278297,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.306923946576125,0,0.512556597022804,0.511707249066704,0.321707842287215,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,7.21823293091825,1.19705285616665,1.26295892981067,0.364182336013434,0,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0.256450125116389,0,0,0.103041011647722,0,0,1.14853107599234,5.20048196829217,1.6068392984416,0,0.154048617114644,0,0.413509717453592,0.214840489736547,0,0,0,4.46269271474641,4.80475168412765,2.4246415373971,1.11273558941105,0,0.94443704049192,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0,0,0,0,2.40389234321312,0,0,0,0,0,0,0.202910376962704,0,0,0.573645408816206,0.196498082026242,0,0,0,0,0,0,1.05844323998063,3.35151137767894,2.17781969722645,0,2.58303223602738,5.05414427002877,3.10401107475673,3.21612760289743,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0.622079175323615,1.43789361835723,0.537063524026827,0.511572370226872,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0.69169171316418,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0.789168805698781,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0.867798691675654,0.489961987071888,1.21882889212564,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.961905843018405,0.426905989478705,0.19980960958213,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0.684526894459965,0,1.71906176567983,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0.335434687599266,0,0,0.105600336519406,0,1.15149118391667,0,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0.226624183040251,0,0,0.646414781807753,0.66116300871345,0,0,0.213574825135389,0.78602152549833,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0,0,1.46431517882356,0.1251909307065,0.573409195690071,0,0.18628920882415,0,0.249960815924213,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0.797525143673985,0.521745061811734,0.150257608997218,2.28483127301277,1.62748293281865,0.727394636810238,0.107410557042488,0,2.3885753321917,1.20008329398946,0,0,0,0.770479321629213,0.214441591374926,0,0.680117776536817,0,1.22368352253234,0,0,0,0,0.38582807654183,0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| |||
|short_description=p@chr1:95005908..95005937,- | |||
}} |
Revision as of 19:39, 10 January 2014
Short description: | p@chr1:95005908..95005937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:95005908..95005937, - |
Coexpression cluster: | C935_Small_Mallassezderived_Gingival_normal_mucinous_Urothelial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 7.69e-12 | 82 |
endoderm-derived structure | 1.88e-11 | 160 |
endoderm | 1.88e-11 | 160 |
presumptive endoderm | 1.88e-11 | 160 |
urothelium | 1.92e-10 | 5 |
gingival epithelium | 2.32e-10 | 3 |
lower respiratory tract epithelium | 7.51e-10 | 3 |
epithelium of bronchus | 7.51e-10 | 3 |
tracheobronchial tree | 9.03e-09 | 15 |
lower respiratory tract | 9.03e-09 | 15 |
mucosa | 1.04e-08 | 20 |
transitional epithelium | 1.08e-08 | 6 |
epithelial bud | 1.36e-08 | 37 |
mouth mucosa | 5.21e-08 | 13 |
respiratory system | 1.54e-07 | 74 |
skin gland | 7.25e-07 | 2 |
epidermis gland | 7.25e-07 | 2 |
gland of integumental system | 7.25e-07 | 2 |
sebaceous gland | 7.25e-07 | 2 |
skin sebaceous gland | 7.25e-07 | 2 |
sweat gland | 7.25e-07 | 2 |
sweat gland placode | 7.25e-07 | 2 |
sebaceous gland placode | 7.25e-07 | 2 |
mammary gland | 8.47e-07 | 4 |
mammary bud | 8.47e-07 | 4 |
mammary ridge | 8.47e-07 | 4 |
mammary placode | 8.47e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.18e-09 | 14 |