FFCP PHASE1:Hg19::chr1:149114613..149114640,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42995 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000455938_5end | |||
|coexpression_cluster_id=C1248 | |||
|description=CAGE_peak_1_at_PFN1P12_5end | |||
|id=chr1:149114613..149114640,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.69e-20!42;CL:0000860!3.91e-18!45;CL:0000839!1.11e-14!70;CL:0000557!4.88e-14!71;CL:0002009!2.71e-13!65;CL:0002194!2.30e-12!63;CL:0000576!2.30e-12!63;CL:0000040!2.30e-12!63;CL:0000559!2.30e-12!63;CL:0000766!3.49e-11!76;CL:0000763!1.28e-10!112;CL:0000049!1.28e-10!112;CL:0002031!1.36e-10!124;CL:0000738!8.79e-10!140;CL:0002032!1.66e-08!165;CL:0000837!1.66e-08!165;CL:0000037!2.92e-08!172;CL:0000566!2.92e-08!172;CL:0002087!5.95e-08!119;CL:0000988!5.19e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.77e-29;33!CL:0002057;3.77e-29;33!CL:0000473;8.72e-23;39!CL:0000234;8.72e-23;39!CL:0000576;2.25e-18;48!CL:0000766;6.80e-13;69!CL:0000197;7.77e-09;6!CL:0000098;7.77e-09;6!CL:0002167;7.77e-09;6!CL:0000453;1.81e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.46e-34,48;CL:0000234,8.46e-34,48;CL:0000860,2.25e-33,42;CL:0002057,2.25e-33,42;CL:0000839,1.53e-29,66;CL:0000557,1.43e-28,67;CL:0002009,1.92e-26,61;CL:0002194,1.39e-24,59;CL:0000576,1.39e-24,59;CL:0000040,1.39e-24,59;CL:0000559,1.39e-24,59;CL:0000766,1.54e-24,72;CL:0000763,2.53e-24,108;CL:0000049,2.53e-24,108;CL:0002031,6.36e-13,120;CL:0002032,4.94e-12,161;CL:0000837,4.94e-12,161;CL:0000738,9.22e-12,136;CL:0000037,6.07e-11,168;CL:0000988,1.09e-09,177;CL:0000197,8.85e-09,6;CL:0000098,8.85e-09,6;CL:0002167,8.85e-09,6;CL:0000453,1.83e-08,5;CL:0002087,3.30e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-23;42!CL:0000049;6.37e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.76e-12!80;UBERON:0001474!8.17e-11!86;UBERON:0004765!5.96e-10!101;UBERON:0001434!5.96e-10!101;UBERON:0002390!5.73e-09!102;UBERON:0003061!5.73e-09!102;UBERON:0002193!4.18e-08!112;UBERON:0001737!4.23e-08!9;UBERON:0002204!4.40e-08!167;UBERON:0002405!2.39e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.35e-14;9!UBERON:0001557;5.35e-14;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.15e-25,76;UBERON:0001474,2.09e-22,82;UBERON:0004765,7.74e-22,90;UBERON:0002405,2.50e-20,93;UBERON:0001434,2.70e-18,100;UBERON:0002390,1.22e-16,98;UBERON:0003061,1.22e-16,98;UBERON:0002193,1.15e-15,108;UBERON:0001737,5.94e-14,9;UBERON:0002204,2.85e-13,167;UBERON:0003081,3.89e-07,203 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0.662794751455832,2.01697543935533,3.01347264011988,6.57279081348636,4.87932798790507,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0.152826811495903,0.164201178899891,0.314843125254717,0,0,7.27635779585557,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,1.45398238779565,4.91238726795452,1.94067248950253,1.39457422143411,3.28934310417461,4.95530193432166,2.8769239232215,1.5369642391746,3.78371567821736,0.689491361473237,2.5819387343353,0,1.88242339542605,4.91231070104122,2.02251136000576,2.14258724659632,4.17207735198922,3.83602275479425,0.329851300186716,1.19678194572979,2.13112375266347,1.45104619314292,6.24123747160254,1.86846674698672,1.50749199154046,4.69334626578181,3.25783267057675,4.84319602106695,3.68277635987565,2.21523671208619,6.5489138756702,3.4016687994407,5.66078342872615,1.12328631146495,3.60424542819615,3.37523732063868,0.855038231223746,3.38158351238453,6.02791707423292,0,0.546138611262131,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,2.63384084775077,0,0,0,3.67810289859492,0.32592226663359,0.946895611469467,3.89653456815823,3.34231370655521,2.3568472597987,4.2091439970888,4.60366568400527,2.81800903396485,1.95089021339817,2.46656856905514,3.03985019564433,3.47763702882063,0.593146252648242,2.1403266247177,5.22677619024884,3.51258962362455,0,0.68725489096526,3.28925599625354,0.95569624297229,0.651083453856419,0.950452044448374,0.752875595388864,0.511946444617674,0,0.473554504088034,0.821127996921047,0,0,0,0,0,3.58015173161885,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0.728590576585084,0,0,0,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.794455084879313,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0.936480230490962,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0,0.103052529238439,0,0,0.675105328965065,0,0,0,3.23292113637624,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0.207322110030741,5.2987378683882,6.56959246336494,0,1.28648187638577,0,0,0,3.31259040111563,4.88895601226495,6.26628677697053,2.97793726377464,6.53638332277218,4.74541238222193,3.23595139584395,4.31687223275761,7.69494313892781,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0.122988438543114,2.23038153388083,0,0,0.201057944823262,0.0925884451585296,0,0,0,2.55046890945169,2.34817388471643,0,2.77791307545966,1.14152491340759,0,0,0,0,0.297262324577456,0,4.87148171776693,3.68615252830205,0.179117045405697,0,0,0,1.93706554829097,1.65862492432618,1.29707958075265,1.64115163454294,2.47641787739459,0,0,3.4214489204541,0,0.901029173531752,2.28661146104463,0,0,0,0,0,6.762422020448,0.26593811658487,0,0.771622122786426,0,0,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0,2.43247561282381,5.02257091432126,2.10833939483032,0,0,8.5582143024431,0,0,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,2.07970861530807,2.49800584316026,3.31175071571263,2.22568688486155,0,0,1.03473071292505,0,0,0,0,0,0,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0.248107807818777,1.68808170616869,0.280660094433074,0,0.511707249066704,0,0,0.154209693802656,0.355123450626254,0.328508624055237,0.519254429183621,0,0,0.200506470303285,0.0920809889358963,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.431831832204279,3.08454505380579,0,0,0,0,0,4.16593765627276,3.66009631434861,0,0,0,0,0,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0,0.322260734604821,0,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.893288987462089,0.10115778085555,0.929691098594572,0,0,31.4194251779611,0,0,0.37064843820784,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,4.59126326432643,0,0,0.281695602532241,3.58528380510129,3.7334635584986,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0.0941438007767792,0,1.68471475667626,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0.478278818186467,0,0.383010740264733,0,1.29848776109822,0,0,0,15.038068625404,3.89371088943688,0,0.403599414382095,0,0.343505344755765,0,0,0,0,0,0,4.59774653409171,0,0,0,0,0.121360521749513,0.222886768554957,0,1.90995587790152,4.15750553165694,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0,0,0.885741385813839,0,1.52581736317083,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.957003479195758,2.38153742844842,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,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| |||
|short_description=p1@PFN1P12 | |||
}} |
Revision as of 20:36, 10 January 2014
Short description: | p1@PFN1P12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_PFN1P12_5end |
Coexpression cluster: | C1248_nasal_Smooth_amniotic_Basophils_CD4_Aortic_acute |
Association with transcript: | -14bp_to_ENST00000455938_5end |
EntrezGene: | NA |
HGNC: | 42995 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.46e-34 | 48 |
phagocyte | 8.46e-34 | 48 |
classical monocyte | 2.25e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.25e-33 | 42 |
myeloid lineage restricted progenitor cell | 1.53e-29 | 66 |
granulocyte monocyte progenitor cell | 1.43e-28 | 67 |
macrophage dendritic cell progenitor | 1.92e-26 | 61 |
monopoietic cell | 1.39e-24 | 59 |
monocyte | 1.39e-24 | 59 |
monoblast | 1.39e-24 | 59 |
promonocyte | 1.39e-24 | 59 |
myeloid leukocyte | 1.54e-24 | 72 |
myeloid cell | 2.53e-24 | 108 |
common myeloid progenitor | 2.53e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 6.36e-13 | 120 |
hematopoietic oligopotent progenitor cell | 4.94e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.94e-12 | 161 |
leukocyte | 9.22e-12 | 136 |
hematopoietic stem cell | 6.07e-11 | 168 |
hematopoietic cell | 1.09e-09 | 177 |
receptor cell | 8.85e-09 | 6 |
sensory epithelial cell | 8.85e-09 | 6 |
olfactory epithelial cell | 8.85e-09 | 6 |
Langerhans cell | 1.83e-08 | 5 |
nongranular leukocyte | 3.30e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.15e-25 | 76 |
bone element | 2.09e-22 | 82 |
skeletal element | 7.74e-22 | 90 |
immune system | 2.50e-20 | 93 |
skeletal system | 2.70e-18 | 100 |
hematopoietic system | 1.22e-16 | 98 |
blood island | 1.22e-16 | 98 |
hemolymphoid system | 1.15e-15 | 108 |
larynx | 5.94e-14 | 9 |
musculoskeletal system | 2.85e-13 | 167 |
lateral plate mesoderm | 3.89e-07 | 203 |