FFCP PHASE1:Hg19::chr1:179051160..179051224,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11997 | |||
|TSSclassifier=strong | |||
|UniProt=Q5W0C9,F2Z3J4 | |||
|association_with_transcript=0bp_to_ENST00000352445,ENST00000367625,ENST00000483887_5end | |||
|description=CAGE_peak_1_at_TOR3A_5end | |||
|id=chr1:179051160..179051224,+ | |||
|ontology_enrichment_celltype=CL:0002320!8.44e-16!365;CL:0000134!8.47e-15!358;CL:0000219!3.90e-14!390;CL:0000988!6.63e-14!182;CL:0000012!1.86e-13!682;CL:0000037!1.42e-12!172;CL:0000566!1.42e-12!172;CL:0000548!1.84e-12!679;CL:0000004!1.84e-12!679;CL:0000255!1.84e-12!679;CL:0000723!3.17e-12!436;CL:0000048!4.03e-12!430;CL:0000034!4.94e-12!444;CL:0000063!6.94e-12!578;CL:0002087!1.82e-11!119;CL:0002032!1.98e-11!165;CL:0000837!1.98e-11!165;CL:0000144!3.44e-11!625;CL:0002371!3.84e-11!591;CL:0002031!4.57e-10!124;CL:0000945!8.65e-10!24;CL:0000826!8.65e-10!24;CL:0000738!7.87e-09!140;CL:0000003!1.13e-08!722;CL:0002194!1.45e-07!63;CL:0000576!1.45e-07!63;CL:0000040!1.45e-07!63;CL:0000559!1.45e-07!63;CL:0002009!2.62e-07!65;CL:0000763!5.03e-07!112;CL:0000049!5.03e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.96e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,5.19e-15,361;CL:0000134,4.88e-14,354;CL:0000219,2.19e-13,386;CL:0000988,3.03e-13,177;CL:0000037,4.05e-12,168;CL:0000723,1.73e-11,433;CL:0000048,2.18e-11,427;CL:0000034,2.67e-11,441;CL:0002087,5.00e-11,115;CL:0002032,5.47e-11,161;CL:0000837,5.47e-11,161;CL:0000945,8.65e-10,24;CL:0000826,8.65e-10,24;CL:0002031,1.22e-09,120;CL:0000738,2.01e-08,136;CL:0002194,3.64e-07,59;CL:0000576,3.64e-07,59;CL:0000040,3.64e-07,59;CL:0000559,3.64e-07,59;CL:0002009,6.56e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!4.39e-08!51;DOID:0060083!4.39e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.39e-08,51;DOID:0060083,4.39e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002384!9.47e-16!375;UBERON:0002405!1.25e-07!115;UBERON:0001474!1.26e-07!86;UBERON:0002371!2.39e-07!80;UBERON:0004765!4.36e-07!101;UBERON:0001434!4.36e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.84e-15,371;UBERON:0002405,1.47e-07,93;UBERON:0001474,3.17e-07,82;UBERON:0002371,6.00e-07,76;UBERON:0004765,8.23e-07,90;UBERON:0001434,8.69e-07,100 | |||
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| |||
|short_description=p1@TOR3A | |||
}} |
Revision as of 22:29, 10 January 2014
Short description: | p1@TOR3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TOR3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000352445, ENST00000367625, ENST00000483887_5end |
EntrezGene: | TOR3A |
HGNC: | 11997 |
UniProt: | Q5W0C9F2Z3J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 5.19e-15 | 361 |
mesenchymal cell | 4.88e-14 | 354 |
motile cell | 2.19e-13 | 386 |
hematopoietic cell | 3.03e-13 | 177 |
hematopoietic stem cell | 4.05e-12 | 168 |
somatic stem cell | 1.73e-11 | 433 |
multi fate stem cell | 2.18e-11 | 427 |
stem cell | 2.67e-11 | 441 |
nongranular leukocyte | 5.00e-11 | 115 |
hematopoietic oligopotent progenitor cell | 5.47e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.47e-11 | 161 |
lymphocyte of B lineage | 8.65e-10 | 24 |
pro-B cell | 8.65e-10 | 24 |
hematopoietic lineage restricted progenitor cell | 1.22e-09 | 120 |
leukocyte | 2.01e-08 | 136 |
monopoietic cell | 3.64e-07 | 59 |
monocyte | 3.64e-07 | 59 |
monoblast | 3.64e-07 | 59 |
promonocyte | 3.64e-07 | 59 |
macrophage dendritic cell progenitor | 6.56e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.84e-15 | 371 |
immune system | 1.47e-07 | 93 |
bone element | 3.17e-07 | 82 |
bone marrow | 6.00e-07 | 76 |
skeletal element | 8.23e-07 | 90 |
skeletal system | 8.69e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.39e-08 | 51 |
immune system cancer | 4.39e-08 | 51 |