FFCP PHASE1:Hg19::chr1:186275818..186275880,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C287 | |||
|description=CAGE_peak_at_chr1:186275818..186275880,+ | |||
|id=chr1:186275818..186275880,+ | |||
|ontology_enrichment_celltype=CL:0002570!6.22e-08!8;CL:0000153!1.01e-07!9;CL:0000447!1.01e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.54e-16;9!CL:0000447;1.54e-16;9!CL:0000138;4.21e-13;6!CL:0002570;1.42e-12;8!CL:0000135;8.20e-10;3!CL:0000388;8.20e-10;3!CL:0002521;1.73e-09;3!CL:0000327;1.92e-09;15!CL:0000499;3.68e-09;28!CL:0000569;7.95e-07;4!CL:0002549;8.90e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.65e-16,9;CL:0000447,1.65e-16,9;CL:0000058,4.54e-13,6;CL:0000138,4.54e-13,6;CL:0002570,1.32e-12,8;CL:0000135,8.45e-10,3;CL:0000388,8.45e-10,3;CL:0002521,1.57e-09,3;CL:0000327,2.00e-09,15;CL:0000499,3.83e-09,28;CL:0002549,8.16e-07,2;CL:0000569,8.47e-07,4;CL:0000011,8.47e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.44e-07;2!CL:0000011;7.95e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-13!115;UBERON:0001013!2.79e-10!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.31e-19;14!UBERON:0007846;8.20e-10;3!UBERON:0000043;8.20e-10;3!UBERON:0007845;8.20e-10;3!UBERON:0002072;1.48e-09;5!UBERON:0002190;1.73e-09;3!UBERON:0007100;1.90e-07;25!UBERON:0005090;6.94e-07;2!UBERON:0001630;6.94e-07;2!UBERON:0000948;8.38e-07;22!UBERON:0005629;8.90e-07;2!UBERON:0005358;8.90e-07;2!UBERON:0001886;8.90e-07;2!UBERON:0004086;8.90e-07;2!UBERON:0005282;8.90e-07;2!UBERON:0005281;8.90e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.72e-19,14;UBERON:0007846,8.45e-10,3;UBERON:0000043,8.45e-10,3;UBERON:0007845,8.45e-10,3;UBERON:0002072,1.52e-09,5;UBERON:0002190,1.57e-09,3;UBERON:0007023,3.56e-08,114;UBERON:0005090,7.69e-07,2;UBERON:0001630,7.69e-07,2;UBERON:0005629,8.16e-07,2;UBERON:0005358,8.16e-07,2;UBERON:0001886,8.16e-07,2;UBERON:0004086,8.16e-07,2;UBERON:0005282,8.16e-07,2;UBERON:0005281,8.16e-07,2;UBERON:0007100,9.02e-07,27 | |||
|phase1_expression=0.726713517082227,5.78071414505655,0.563817616383885,0,0.893922188854576,0,5.06599756336621,111.182697723122,1.82829939739887,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0.501559486172034,0,0,0,0.111410456885174,0,0,0.541607727530031,2.81800903396485,3.25148368899696,0.164437904603676,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0,28.1922538859962,2.00535164254356,99.3647120071251,105.773030957796,110.466115558698,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,2.8757911252537,11.5235184896,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0.8231480226628,0,226.891512331077,143.492773634933,80.9382172153524,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22651376278,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.799783929456456,0,0,0,0,0,0,1.30303176000821,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.981531933753119,0.500170521059677,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,4.50342662164303,0.343143423810856,0,0,0.106727557803444,0,0,0.907170879989041,0.496215615637554,0,0.280660094433074,0.640695746278505,0,0,0,0,3.01854933032316,7.63782550928425,0,7.08883308605751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2314702696017,0,0,0,0,0,0,0,1.07452572308291,0,0.322260734604821,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,43.9103881419141,55.9801318031833,0,0,0,0,0,12.9918445071955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,18.7530469468024,0,0,0,0,0,0,0.994147647766298,0,0,0,0,15.9398390600856,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,2.90799823828566,0.185536196323703,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85760885457012,0,0,0,0,0.202203398942031,11.236087062183,0,0,0,0,0,0,0,6.8241505998767,0,0,0,0,0,0,0.284609546029793,0,0,0,0,3.84398670132466,0,0.870806981601766,0.584714536689484,0.246346371159628,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90995361781156,2.7499250881402,0.717873024576814,0.998395002494955,6.86761677018513,0.223171457441873,1.14211903227435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,8.5763439164804,0,0,0,0,0,0,0,0,0,63.4571171826097,7.95041333473328,0.129282956361551,0,0,0,1.60181118851542,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,25.5225712936555,1.63599316893057,15.5345641220732,0.189403005275089,1.76097531226803,18.6860356535273,1.14420034198462,1.51230923763239,24.2482032909138,0.147855149989634,0,0,0,10.7823614038622,0,0,0,0,0,0.181848659202559,0,0,0,0,3.77735275701072,3.36749488765919,0,0,0.428883182749851,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.40341013740704,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,1.09651553371436,4.96211178389294,0.175871244359621,0,0,0,3.64179362541979,0,0.177404740325278,0,0.171488009437418,0.135939465953663,0.131545547125698,0,0,0.313972371402056,0.157115589916002,0,0,0,0,2.35872595782966,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,3.23714418593947,6.05710560451857,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.594092800654172,5.4945244585842,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,34.6631721473564,7.7872781182282,0,0,0,0,0,0,0,1.51557396436479,0.267964130156178,0,0,5.97055149322747,0.23806443146374,0,0.248298857183432,0,0.445530107947154,0,3.70118471424834,0,0.0673520530145875,1.57788851863888,0.332660356546013,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,5.63566622054873,0 | |||
|short_description=p@chr1:186275818..186275880,+ | |||
}} |
Revision as of 22:53, 10 January 2014
Short description: | p@chr1:186275818..186275880, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186275818..186275880, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.65e-16 | 9 |
carbohydrate secreting cell | 1.65e-16 | 9 |
chondroblast | 4.54e-13 | 6 |
chondrocyte | 4.54e-13 | 6 |
mesenchymal stem cell of adipose | 1.32e-12 | 8 |
fibrocyte | 8.45e-10 | 3 |
tendon cell | 8.45e-10 | 3 |
subcutaneous fat cell | 1.57e-09 | 3 |
extracellular matrix secreting cell | 2.00e-09 | 15 |
stromal cell | 3.83e-09 | 28 |
fibroblast of choroid plexus | 8.16e-07 | 2 |
cardiac mesenchymal cell | 8.47e-07 | 4 |
migratory trunk neural crest cell | 8.47e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.72e-19 | 14 |
dense regular connective tissue | 8.45e-10 | 3 |
tendon | 8.45e-10 | 3 |
regular connective tissue | 8.45e-10 | 3 |
hypodermis | 1.52e-09 | 5 |
subcutaneous adipose tissue | 1.57e-09 | 3 |
adult organism | 3.56e-08 | 114 |
muscle structure | 7.69e-07 | 2 |
muscle organ | 7.69e-07 | 2 |
vascular plexus | 8.16e-07 | 2 |
ventricle of nervous system | 8.16e-07 | 2 |
choroid plexus | 8.16e-07 | 2 |
brain ventricle | 8.16e-07 | 2 |
ventricular system of brain | 8.16e-07 | 2 |
ventricular system of central nervous system | 8.16e-07 | 2 |
primary circulatory organ | 9.02e-07 | 27 |