FFCP PHASE1:Hg19::chr1:203148096..203148127,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr1:203148096..203148127,- | |||
|id=chr1:203148096..203148127,- | |||
|ontology_enrichment_celltype=CL:0000153!1.07e-11!9;CL:0000447!1.07e-11!9;CL:0000667!1.82e-09!6;CL:0000058!1.82e-09!6;CL:0000138!1.82e-09!6;CL:0000499!2.62e-07!27;CL:0000135!3.46e-07!3;CL:0000386!3.46e-07!3;CL:0000388!3.46e-07!3;CL:0000327!5.31e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000153;6.72e-28;9!CL:0000447;6.72e-28;9!CL:0000138;9.33e-22;6!CL:0000327;2.29e-16;15!CL:0000235;4.70e-14;6!CL:0000499;1.07e-13;28!CL:0000214;4.19e-08;3!CL:0000135;5.25e-08;3!CL:0000388;5.25e-08;3!CL:0000182;3.24e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.71e-28,9;CL:0000447,4.71e-28,9;CL:0000058,6.38e-22,6;CL:0000138,6.38e-22,6;CL:0000327,1.86e-16,15;CL:0000235,6.27e-14,6;CL:0000499,8.95e-14,28;CL:0000214,4.20e-08,3;CL:0000151,4.60e-08,36;CL:0000135,4.82e-08,3;CL:0000388,4.82e-08,3;CL:0000182,3.22e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0010115;9.80e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;8.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,8.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.95e-14!115;UBERON:0002298!2.62e-11!8;UBERON:0001049!1.00e-08!57;UBERON:0005068!1.00e-08!57;UBERON:0006241!1.00e-08!57;UBERON:0007135!1.00e-08!57;UBERON:0000073!9.29e-08!94;UBERON:0001016!9.29e-08!94;UBERON:0005743!1.47e-07!86;UBERON:0001017!1.71e-07!82;UBERON:0002308!1.92e-07!9;UBERON:0000125!1.92e-07!9;UBERON:0000043!3.46e-07!3;UBERON:0006331!8.17e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;5.25e-11;2!UBERON:0006331;5.25e-11;2!UBERON:0009662;5.25e-11;2!UBERON:0006915;4.19e-08;3!UBERON:0007616;4.19e-08;3!UBERON:0002217;4.19e-08;3!UBERON:0002018;4.19e-08;3!UBERON:0007846;5.25e-08;3!UBERON:0000043;5.25e-08;3!UBERON:0007845;5.25e-08;3!UBERON:0002298;5.41e-08;6!UBERON:0000988;1.29e-07;3!UBERON:0002363;9.80e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,5.00e-11,2;UBERON:0006331,5.00e-11,2;UBERON:0009662,5.00e-11,2;UBERON:0006915,4.20e-08,3;UBERON:0007616,4.20e-08,3;UBERON:0002217,4.20e-08,3;UBERON:0002018,4.20e-08,3;UBERON:0007846,4.82e-08,3;UBERON:0000043,4.82e-08,3;UBERON:0007845,4.82e-08,3;UBERON:0002298,4.85e-08,6;UBERON:0000988,1.25e-07,3;UBERON:0002363,9.81e-07,1;UBERON:0007645,9.81e-07,1;UBERON:0007647,9.81e-07,1;UBERON:0010115,9.81e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,120.720676896445,10.0267582127178,4.20054904986389,3.1811437882044,1.94653948121054,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89696330006576,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,30.1865502029617,2.22946743433092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,1.27587750330633,1.49801404789436,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.640695746278505,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0,0.0852266274161009,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,6.12212142363226,7.57378253807774,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,1.23408681925858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,1.84344458585075,1.56573275524691,2.0021897005429,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0,5.81104484819706,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,9.35161378501622,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15580235960608,0,1.36905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90517903781507,0,1.42211251997706,2.38018683136842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,1.55300672151593,0,0,0,0,0,0,0,0,0,0,1.10961172300523,0.757612021100357,5.0313580350515,1.77962244319307,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,23.1508812740515,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,1.24329698497822,0,0,0,1.41998400876678,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,1.78227840196252,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,2.60396512716726,18.0248495166253,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.12729431655633,0,0,0,0.0673520530145875,1.2192774916755,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:203148096..203148127,- | |||
}} |
Revision as of 23:27, 10 January 2014
Short description: | p@chr1:203148096..203148127, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203148096..203148127, - |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.71e-28 | 9 |
carbohydrate secreting cell | 4.71e-28 | 9 |
chondroblast | 6.38e-22 | 6 |
chondrocyte | 6.38e-22 | 6 |
extracellular matrix secreting cell | 1.86e-16 | 15 |
macrophage | 6.27e-14 | 6 |
stromal cell | 8.95e-14 | 28 |
synovial cell | 4.20e-08 | 3 |
secretory cell | 4.60e-08 | 36 |
fibrocyte | 4.82e-08 | 3 |
tendon cell | 4.82e-08 | 3 |
hepatocyte | 3.22e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 5.00e-11 | 2 |
brainstem nucleus | 5.00e-11 | 2 |
hindbrain nucleus | 5.00e-11 | 2 |
stratified squamous epithelium | 4.20e-08 | 3 |
layer of synovial tissue | 4.20e-08 | 3 |
synovial joint | 4.20e-08 | 3 |
synovial membrane of synovial joint | 4.20e-08 | 3 |
dense regular connective tissue | 4.82e-08 | 3 |
tendon | 4.82e-08 | 3 |
regular connective tissue | 4.82e-08 | 3 |
brainstem | 4.85e-08 | 6 |
pons | 1.25e-07 | 3 |
dura mater | 9.81e-07 | 1 |
future meninx | 9.81e-07 | 1 |
ectomeninx | 9.81e-07 | 1 |
future dura mater | 9.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 8.34e-07 | 1 |