FFCP PHASE1:Hg19::chr10:3954205..3954224,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3015 | |||
|description=CAGE_peak_at_chr10:3954205..3954224,+ | |||
|id=chr10:3954205..3954224,+ | |||
|ontology_enrichment_celltype=CL:0000244!2.05e-10!4;CL:0000731!2.05e-10!4;CL:0002076!2.15e-09!43;CL:0002541!4.14e-08!3;CL:0000622!5.17e-07!5;CL:0002621!6.98e-07!3;CL:0002623!8.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.85e-26;4!CL:0000731;3.85e-26;4!CL:0002541;1.05e-19;3!CL:0000039;9.70e-09;7!CL:0000586;9.70e-09;7!CL:0002368;1.32e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.73e-26,4;CL:0000731,3.73e-26,4;CL:0002541,9.54e-20,3;CL:0000039,9.09e-09,7;CL:0000586,9.09e-09,7;CL:0002368,1.45e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.18e-14;4!UBERON:0007284;5.18e-14;4!UBERON:0004140;1.25e-07;1!UBERON:0010226;1.61e-07;1!UBERON:0000358;2.14e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.51e-07;1!DOID:10165;3.51e-07;1!DOID:1798;3.51e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.66e-07,1;DOID:10165,2.66e-07,1;DOID:1798,2.66e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.34e-12!115;UBERON:0000161!1.83e-09!35;UBERON:0005631!7.24e-09!14;UBERON:0000158!7.24e-09!14;UBERON:0000365!2.77e-08!5;UBERON:0000476!4.14e-08!3;UBERON:0000920!4.14e-08!3;UBERON:0000166!9.99e-08!21;UBERON:0003978!1.18e-07!3;UBERON:0009751!1.18e-07!3;UBERON:0000946!1.18e-07!3;UBERON:0002523!1.18e-07!3;UBERON:0005983!1.18e-07!3;UBERON:0002165!1.18e-07!3;UBERON:0002062!1.18e-07!3;UBERON:0007280!1.18e-07!3;UBERON:0001896!2.40e-07!3;UBERON:0005290!2.40e-07!3;UBERON:0010096!2.40e-07!3;UBERON:0001949!6.98e-07!3;UBERON:0005910!7.31e-07!6;UBERON:0006947!9.87e-07!3;UBERON:0004054!9.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.89e-21;5!UBERON:0003124;1.05e-19;3!UBERON:0000920;1.05e-19;3!UBERON:0003978;1.73e-18;3!UBERON:0000946;1.73e-18;3!UBERON:0005910;1.71e-17;6!UBERON:0002133;1.08e-12;2!UBERON:0007100;3.74e-11;25!UBERON:0001896;3.45e-09;3!UBERON:0005290;3.45e-09;3!UBERON:0004151;5.62e-09;3!UBERON:0000486;8.51e-09;12!UBERON:0002084;1.61e-07;1!UBERON:0002146;1.61e-07;1!UBERON:0002082;1.61e-07;1!UBERON:0005623;1.61e-07;1!UBERON:0000996;3.51e-07;1!UBERON:0002135;3.51e-07;1!UBERON:0002134;3.51e-07;1!UBERON:0002426;3.51e-07;1!UBERON:0003831;3.51e-07;1!UBERON:0003898;3.51e-07;1!UBERON:0004830;3.51e-07;1!UBERON:0005208;3.51e-07;1!UBERON:0003830;3.51e-07;1!UBERON:0005175;3.51e-07;1!UBERON:0001774;3.51e-07;1!UBERON:0004145;3.51e-07;1!UBERON:0005946;3.51e-07;1!UBERON:0001103;3.51e-07;1!UBERON:0005965;3.51e-07;1!UBERON:0002078;3.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.75e-21,5;UBERON:0000920,9.54e-20,3;UBERON:0003978,1.73e-18,3;UBERON:0009751,1.73e-18,3;UBERON:0000946,1.73e-18,3;UBERON:0002523,1.73e-18,3;UBERON:0005983,1.73e-18,3;UBERON:0002165,1.73e-18,3;UBERON:0002062,1.73e-18,3;UBERON:0007280,1.73e-18,3;UBERON:0005910,1.68e-17,6;UBERON:0002133,1.01e-12,2;UBERON:0007100,2.93e-10,27;UBERON:0001896,3.67e-09,3;UBERON:0005290,3.67e-09,3;UBERON:0010096,3.67e-09,3;UBERON:0004151,5.29e-09,3;UBERON:0003124,9.57e-09,7;UBERON:0004797,3.20e-08,7;UBERON:0002084,1.61e-07,1;UBERON:0002082,1.61e-07,1;UBERON:0010226,1.61e-07,1;UBERON:0002146,1.72e-07,1;UBERON:0005623,1.72e-07,1;UBERON:0002426,2.83e-07,1;UBERON:0003831,2.83e-07,1;UBERON:0003898,2.83e-07,1;UBERON:0004830,2.83e-07,1;UBERON:0003830,2.83e-07,1;UBERON:0005175,2.83e-07,1;UBERON:0001774,2.83e-07,1;UBERON:0001103,2.83e-07,1;UBERON:0010084,2.83e-07,1;UBERON:0002134,3.20e-07,1;UBERON:0005208,3.20e-07,1;UBERON:0005946,3.20e-07,1;UBERON:0005965,3.20e-07,1;UBERON:0002078,3.20e-07,1;UBERON:0002135,3.62e-07,1;UBERON:0000996,4.09e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.573609190778008,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.42675371031213,1.1240175325762,0.904760751704678,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,2.47927373041467,2.88285101047659,3.1903178123646,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,8.6101074534246,6.73885902670502,8.86860307073351,15.6211912140732,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,7.83917274919404,4.39812457607883,6.84478443108651,6.38002319463839,3.48070854927077,12.7928346244472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,3.20824593616357,1.43574604915363,0.798716001995964,6.00916467391199,3.34757186162809,4.16537529417703,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0138643698305,2.44043913381075,0.248385611765534,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83334686136996,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0,0,0.23806443146374,0,0.186224142887574,0,0,0,0.435433495793923,0.684466602170562,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,2.34640942403454,0.244482888365733,0,1.33151354837103,0,0 | |||
|short_description=p@chr10:3954205..3954224,+ | |||
}} |
Revision as of 01:28, 11 January 2014
Short description: | p@chr10:3954205..3954224, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3954205..3954224, + |
Coexpression cluster: | C3015_Urothelial_chorionic_medulla_choriocarcinoma_Small_pancreatic_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.73e-26 | 4 |
urothelial cell | 3.73e-26 | 4 |
chorionic membrane mesenchymal stem cell | 9.54e-20 | 3 |
germ line cell | 9.09e-09 | 7 |
germ cell | 9.09e-09 | 7 |
respiratory epithelial cell | 1.45e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.66e-07 | 1 |
endocrine pancreas cancer | 2.66e-07 | 1 |
pancreatic endocrine carcinoma | 2.66e-07 | 1 |