FFCP PHASE1:Hg19::chr11:830411..830427,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-57bp_to_ENST00000526531_5end | |||
|description=CAGE_peak_8_at_EFCAB4A_5end | |||
|id=chr11:830411..830427,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;1.04e-19;4!CL:0002575;2.89e-18;2!CL:0002591;5.30e-10;1!CL:0000306;3.58e-09;4!CL:0002222;3.58e-09;4!CL:0002224;3.58e-09;4!CL:0002322;1.66e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.01e-19,4;CL:0002575,3.16e-18,2;CL:0002591,6.31e-10,1;CL:0000306,3.89e-09,4;CL:0002222,3.89e-09,4;CL:0002224,3.89e-09,4;CL:0002322,1.50e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.30e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.64e-12!90;UBERON:0000119!1.29e-10!312;UBERON:0000924!2.53e-10!173;UBERON:0006601!2.53e-10!173;UBERON:0000483!3.40e-10!309;UBERON:0003075!3.90e-10!86;UBERON:0007284!3.90e-10!86;UBERON:0000020!6.16e-10!23;UBERON:0000970!1.20e-09!20;UBERON:0001032!2.95e-09!24;UBERON:0004456!2.95e-09!24;UBERON:0004121!4.90e-09!169;UBERON:0002104!6.47e-09!21;UBERON:0000019!8.64e-09!19;UBERON:0000047!8.64e-09!19;UBERON:0004088!8.64e-09!19;UBERON:0003072!8.64e-09!19;UBERON:0003071!8.64e-09!19;UBERON:0004128!8.64e-09!19;UBERON:0000153!6.92e-08!129;UBERON:0007811!6.92e-08!129;UBERON:0000033!9.32e-08!123;UBERON:0003056!1.76e-07!61;UBERON:0000073!1.80e-07!94;UBERON:0001016!1.80e-07!94;UBERON:0001456!1.82e-07!21;UBERON:0005743!2.66e-07!86;UBERON:0000063!6.58e-07!97;UBERON:0001801!7.61e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;3.58e-09;4!UBERON:0005389;3.58e-09;4!UBERON:0003891;3.58e-09;4!UBERON:0000484;3.58e-09;4!UBERON:0000965;3.58e-09;4!UBERON:0001803;3.58e-09;4!UBERON:0000970;9.05e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000076,5.76e-10,8;UBERON:0010077,3.89e-09,4;UBERON:0005389,3.89e-09,4;UBERON:0000484,3.89e-09,4;UBERON:0002546,3.89e-09,4;UBERON:0000965,3.89e-09,4;UBERON:0001803,3.89e-09,4;UBERON:0003073,3.89e-09,4;UBERON:0005426,3.89e-09,4;UBERON:0003891,4.40e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0.263766978228454,0.495065411840187,0.994192127183747,0,0,0,0.487932798790507,0.492484232307152,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0.393364276848904,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0,0.378139268656271,0.443458794925128,0.966182642624386,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,1.13061588384802,0,0.825354125820202,0.208994966536811,0.516833518338658,0.71153252537342,0,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0.413303124703062,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,0,0,0,1.70763188581434,0.662648841607426,0.69716365721711,0.207322110030741,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0.201057944823262,0.277765335475589,0,1.03993478527958,1.44331342025273,1.27523445472584,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0,0.2933531432838,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.356857977594324,0,0,0,0,0,0,0.553107505625109,0,2.74121620447837,2.05886054286514,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0.616122696835318,2.35304930753057,0,0.422206515571503,0,0.170093705276516,0,0,0.812839312631559,1.50506932156456,0.254876273045038,0,0.895499018888713,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.74129687641568,0.143124886741991,0.744316738719335,0,0,0.511795582622668,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,2.26016233240486,0.551365343546124,0,0,0.578775534266688,0,0,0,0.281695602532241,0.430234056612155,0.0982490410131212,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,3.43056302373444,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0.422008249231538,0.222617410045812,0,0.844501632511974,0,0,0.503865495708552,0,0,0,0.718946809178615,0,0,0,0,0,0,0.0927680981618513,0,0,2.71125999988207,0,0.682760689712998,0.508507300585533,0,1.72371686620732,0,0,0,0.361789315876224,1.52581736317083,0.663475559587348,0.886642856860642,0.438770794307945,0,0,0.0769502585037971,0,0,0.179515288819544,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,1.94749775767882,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0.794305140223502,1.58186518546373,0,0,0.0633107959558787,0,0.400794101257669,0.213452994739353,0,0,0,0.343189995723929,0.14405479798815,0.621262677827163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0.272406812223151,0.482259445395058,0.550157746388935,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.110929051536852,0.18628920882415,0.691743174681154,0.624902039810533,0,0,0,0,1.01444720027578,0.298509605773748,0.467426619694449,0,1.13641803165053,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0.53168342911599,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.629063767423586,0.327628914576042,0.509197589862076,0.212574920101683,0.867550349813015,0,0,0.157723490002507,0,0,0,0.385375350578757,0,0.159633859057151,0,0,0.276629009856872,0,0,0,0.589848616738702,0,0.115525666150338,0,0,0,0,0.40341013740704,0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| |||
|short_description=p8@EFCAB4A | |||
}} |
Revision as of 05:53, 11 January 2014
Short description: | p8@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EFCAB4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -57bp_to_ENST00000526531_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.01e-19 | 4 |
central nervous system pericyte | 3.16e-18 | 2 |
smooth muscle cell of the pulmonary artery | 6.31e-10 | 1 |
crystallin accumulating cell | 3.89e-09 | 4 |
vertebrate lens cell | 3.89e-09 | 4 |
lens epithelial cell | 3.89e-09 | 4 |
embryonic stem cell | 1.50e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
external ectoderm | 5.76e-10 | 8 |
cuboidal epithelium | 3.89e-09 | 4 |
transparent eye structure | 3.89e-09 | 4 |
simple cuboidal epithelium | 3.89e-09 | 4 |
cranial placode | 3.89e-09 | 4 |
lens of camera-type eye | 3.89e-09 | 4 |
epithelium of lens | 3.89e-09 | 4 |
lens placode | 3.89e-09 | 4 |
lens vesicle | 3.89e-09 | 4 |
stroma | 4.40e-09 | 4 |