FFCP PHASE1:Hg19::chr11:33744198..33744239,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=966 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1689 | |||
|TSSclassifier=strong | |||
|UniProt=P13987 | |||
|association_with_transcript=16bp_to_ENST00000415002_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_6_at_CD59_5end | |||
|id=chr11:33744198..33744239,- | |||
|ontology_enrichment_celltype=CL:0000055!3.56e-15!180;CL:0000048!1.30e-13!430;CL:0000723!8.27e-13!436;CL:0000057!1.14e-12!75;CL:0000548!6.79e-12!679;CL:0000004!6.79e-12!679;CL:0000255!6.79e-12!679;CL:0002371!1.10e-11!591;CL:0000034!1.96e-11!444;CL:0000012!2.12e-11!682;CL:0002620!4.12e-10!23;CL:0000144!2.09e-09!625;CL:0000222!2.18e-09!119;CL:0000359!7.63e-09!32;CL:0000680!1.98e-08!57;CL:0000056!1.98e-08!57;CL:0000355!1.98e-08!57;CL:0000187!2.06e-07!54;CL:0000003!2.91e-07!722;CL:0000192!3.22e-07!42;CL:0000514!3.22e-07!42;CL:0000183!7.24e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.74e-09;32!CL:0000349;5.10e-08;19!CL:0002620;2.64e-07;23!CL:0000840;4.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.24e-10,32;CL:0000349,6.36e-08,19;CL:0000048,6.77e-08,427;CL:0000723,1.79e-07,433;CL:0002620,1.89e-07,23;CL:0000840,3.98e-07,5;CL:0001029,3.98e-07,5;CL:0000034,6.20e-07,441;CL:0002009,8.57e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.40e-18!84;UBERON:0003081!2.70e-17!216;UBERON:0001637!2.83e-16!42;UBERON:0003509!2.83e-16!42;UBERON:0004572!2.83e-16!42;UBERON:0002204!5.35e-15!167;UBERON:0000055!6.10e-15!69;UBERON:0001981!9.25e-15!60;UBERON:0007500!9.25e-15!60;UBERON:0004537!9.25e-15!60;UBERON:0006965!9.25e-15!60;UBERON:0004573!3.43e-12!33;UBERON:0004571!3.43e-12!33;UBERON:0002049!3.08e-11!79;UBERON:0007798!3.08e-11!79;UBERON:0001009!6.44e-10!113;UBERON:0000914!1.33e-09!83;UBERON:0002329!1.33e-09!83;UBERON:0003077!1.33e-09!83;UBERON:0003059!1.33e-09!83;UBERON:0007282!1.33e-09!83;UBERON:0009618!1.33e-09!83;UBERON:0007285!1.33e-09!83;UBERON:0000926!1.79e-09!448;UBERON:0004120!1.79e-09!448;UBERON:0006603!1.79e-09!448;UBERON:0004290!3.55e-09!70;UBERON:0004535!5.07e-09!110;UBERON:0003914!7.87e-09!118;UBERON:0000947!2.62e-08!21;UBERON:0010191!2.62e-08!21;UBERON:0005631!4.45e-08!14;UBERON:0000158!4.45e-08!14;UBERON:0001134!4.48e-08!61;UBERON:0002036!4.48e-08!61;UBERON:0003082!4.48e-08!61;UBERON:0000486!6.39e-08!82;UBERON:0002385!8.38e-08!63;UBERON:0001015!8.38e-08!63;UBERON:0000383!8.38e-08!63;UBERON:0004765!2.48e-07!101;UBERON:0001434!2.48e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.85e-12;42!UBERON:0003509;2.85e-12;42!UBERON:0004572;2.85e-12;42!UBERON:0004573;6.46e-12;33!UBERON:0004571;6.46e-12;33!UBERON:0000478;1.71e-08;24!UBERON:0007500;4.30e-08;56!UBERON:0001981;4.30e-08;56!UBERON:0004537;4.30e-08;56!UBERON:0005631;2.77e-07;10!UBERON:0000158;2.77e-07;10!UBERON:0001987;5.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.73e-20,203;UBERON:0004872,7.63e-18,83;UBERON:0001637,2.13e-16,42;UBERON:0003509,2.13e-16,42;UBERON:0004572,2.13e-16,42;UBERON:0004573,6.25e-13,33;UBERON:0004571,6.25e-13,33;UBERON:0007500,1.27e-12,59;UBERON:0001981,1.27e-12,59;UBERON:0004537,1.27e-12,59;UBERON:0006965,1.27e-12,59;UBERON:0005631,4.46e-12,14;UBERON:0000158,4.46e-12,14;UBERON:0000926,2.09e-11,315;UBERON:0004120,2.09e-11,315;UBERON:0006603,2.09e-11,315;UBERON:0003124,5.68e-11,7;UBERON:0000055,9.82e-11,68;UBERON:0001009,4.52e-09,112;UBERON:0003914,6.62e-09,117;UBERON:0000478,2.15e-08,24;UBERON:0002049,2.52e-08,78;UBERON:0007798,2.52e-08,78;UBERON:0004535,2.73e-08,109;UBERON:0002204,1.04e-07,167;UBERON:0007503,3.32e-07,78;UBERON:0001987,3.47e-07,4;UBERON:0004340,3.47e-07,4;UBERON:0007100,5.91e-07,27 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,1.89515962028049,0,0.491467873003018,0,5.24259293112413,1.31883489114227,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0,1.23350366406548,0.929119112685311,0.863077176966451,5.12321413058201,7.09446689665756,0.689491361473237,1.93645405075148,0,0,0.272906150057846,1.34834090667051,0,0.962787081228281,0,0.329851300186716,5.58498241340569,5.11469700639233,0.290209238628584,0,1.24564449799115,2.00998932205395,6.77927793946262,9.55630916702513,0.605399502633369,1.10483290796269,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,1.0843174571537,0,1.01392563272577,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,2.92092654289215,3.65672448328461,2.39324328933957,0,0,0,1.39133685156694,0.860234595106124,1.04142150482278,1.13061588384802,0.838998872419812,1.37559020970034,1.04497483268405,0.258416759169329,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0.488124115096339,1.47065232138347,0,0.535798369704479,0.22452937262617,0.337834441449967,0,0,1.83201743930407,0,0,0,1.49091585508596,1.51956613997496,0.264818361626438,1.14734648299525,0.709336764396714,0,1.06748995729705,2.22000793575444,0.311211035399766,1.0776853765575,1.9615428373615,0,0,0,1.87296046098192,0.570471821544449,1.49448680551801,1.05691048779388,1.78060238804945,2.52811452064047,0.816616685019573,0.245668634623536,0.516628905878827,1.18800285728205,0.247266929278557,0.910161361938026,0,0,0.250237039743928,0.554128230968366,1.31693286264251,0.919463387397059,0.751190294532984,3.74326204428069,4.30535125653269,0.640672166455702,0.211931901159562,1.50045548042201,0.309157587715317,0.515281080091258,0.930584281657949,3.71307930930786,1.75386609290158,1.00973509697646,0.276149695926898,0.323292113637624,2.4850671476163,1.41052937518696,1.3564847384839,1.15956511897978,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.68584690078102,1.20505514941741,1.65440959098591,1.52515610864684,0.949082476444386,2.69662616320329,1.56977172100277,1.15424147083917,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0,1.03993478527958,0,0,0.117408694235822,0.288732895522148,1.38895653772983,0.190254152234598,0,0.858486162094873,1.23108503043699,5.6161023633417,1.78357394746474,0.93733833986777,0.503946384596579,0,0.358234090811393,0.871901815541886,0,1.97065295158377,0.44024217006613,0.207328115540772,0.144119953416961,0,0.952468414382536,0,0,1.71072446022705,0.308482478109971,0,0,0,0,1.24675085895615,0,0,8.45302752556,0.531876233169741,0,0.257207374262142,0,0.799266537048298,0,0,0,11.075030265987,0,0,0,0,0,0,1.00451418286425,0,2.15662369942424,0,0,1.59259437334337,0.61642896765115,1.43248770591916,0,0,0,0.128343036279748,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0.623912584592421,0.178428988797162,0.315404830067869,0,0,0,0,0,0.921845842708516,0.0868836144680828,0.195801157462741,0,0,0,0,1.81876542867756,3.32870879020994,3.62868351995616,0.496215615637554,0.61384789315225,0.280660094433074,0.896974044789907,0,0.482561763430822,1.48418066444991,0.771048469013278,0.177561725313127,0.410635780069046,0,0.464841513839837,0,0.40101294060657,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0.539107359730903,0,0,0.422206515571503,1.13733384070897,2.89159298970077,1.72732732881711,0,0,0,0,0.831076008928724,0,0,0,0,0,0,4.94596855909067,0.27470839445503,0.330037999682352,0.574265537996172,0,0,0,0.770243085573222,0.15350367472613,0.689182862422653,0.107420244868274,0.145016693914229,0.170453254832202,0.801288320820636,0,0,0.255225424989168,0,1.39453664789186,2.83331112147576,1.3940745403212,1.54016790088044,1.06461206063404,2.60979897622522,2.03856641014312,4.72312126248571,0,0,0,0,0,1.90921948755562,2.35484592059769,0,0.274537029736055,0.117812402345686,0.606547444719948,0,1.68503382495592,0,1.21856744815642,0,0.136499911407986,0.141405431953713,1.13008116620243,2.2054613741845,1.99031692572366,1.75380354101505,0.578775534266688,0,2.02910376962704,1.54911749049875,0.845086807596724,0.286822704408103,0,0.7133421029625,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0,0,4.14232723417828,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,1.5602073798847,0,6.44610108791763,0.296964680832639,3.07160702099232,0,0,0,4.12009685566899,0.211125408127993,0.398495976502139,0,0,0.306806047506464,0,3.11039587661807,0.269605053441981,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,1.34636466614658,0.325942115766024,12.4410452295449,1.00757352742049,13.3258694004659,0,0.784901281975124,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.34823682632161,0,0.171986032471617,2.80593360738347,2.55812609801649,2.79192553980911,0.0969890164884194,0,0.451961481561065,6.16688660910379,0.794858446811959,0,0.391102765469606,1.04206466326994,0,0.39961921916426,0,0,0,0.576219191952599,0.49701014226173,0.471388069233591,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0.429765441419957,0.525774708558629,0,0,2.87149209830726,1.59743200399193,1.28767814440971,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,6.1904156364636,0,0,0,0,0.211200673038813,0,0,0,1.32418394073086,0,1.08599920350743,0.864221491201268,0.979762080328227,0,0.246277562248017,0.170388021785422,0.226624183040251,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0.704815022316672,0.640724475406168,0,0,0.992332043623902,0,0,2.55336503108073,0.544017803369474,1.0027595760908,0.612691153526923,0.327872630709804,0,0,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0,0.454947352624943,0,3.05845565607623,0,0,0.597019211547496,0.467426619694449,1.66441758450784,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0.604923695052956,1.86524640699337,3.54852359975121,1.11507737014592,0,0.155262956876259,0.414706207840855,1.59505028734797,0.521745061811734,0,0,0.813741466409323,1.09109195521536,0.214821114084977,0,0.398095888698616,1.20008329398946,1.03018711554838,0.673498977531838,1.26184898228651,0.385239660814607,0,0,0.226705925512272,0,0,0,0,0,0.353378291891762,0.192914038270915,0.506827321959218,0,3.10887307558079,0.303859956177382,0.138258436151731,0.779441235357554,0.132864840313363,0.163565394255844,0,0.245772908753719,0,2.59983614611409,0.106691729694141,0,0.567515953566836,0.552317850755522,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,2.288292572803,2.0710797781803,0,0,0.40341013740704,0,0,1.80149109261106,0,0,0,0,0,0,0,0,0,0.511049710558381,0.535701835878287,0,0,0,24.2157470544004,0.576169937778896,0.171488009437418,0.135939465953663,0,0.236387681767936,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0.93061915699296,0.955538938977433,0,0,0,0.647428837187895,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,2.71883383500507,0.0939839179798536,0.0644578879735772,0,0.357107877211315,0,0,0,0,0.143339583151451,0,0,0,0,0,2.31087814315709,1.73050624849516,0,0,0,0.101988829741982,0,0,0,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | |||
|short_description=p6@CD59 | |||
}} |
Revision as of 07:10, 11 January 2014
Short description: | p6@CD59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD59_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 16bp_to_ENST00000415002_5end |
EntrezGene: | CD59 |
HGNC: | 1689 |
UniProt: | P13987 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.24e-10 | 32 |
extraembryonic cell | 6.36e-08 | 19 |
multi fate stem cell | 6.77e-08 | 427 |
somatic stem cell | 1.79e-07 | 433 |
skin fibroblast | 1.89e-07 | 23 |
immature conventional dendritic cell | 3.98e-07 | 5 |
common dendritic progenitor | 3.98e-07 | 5 |
stem cell | 6.20e-07 | 441 |
macrophage dendritic cell progenitor | 8.57e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.73e-20 | 203 |
splanchnic layer of lateral plate mesoderm | 7.63e-18 | 83 |
artery | 2.13e-16 | 42 |
arterial blood vessel | 2.13e-16 | 42 |
arterial system | 2.13e-16 | 42 |
systemic artery | 6.25e-13 | 33 |
systemic arterial system | 6.25e-13 | 33 |
epithelial tube open at both ends | 1.27e-12 | 59 |
blood vessel | 1.27e-12 | 59 |
blood vasculature | 1.27e-12 | 59 |
vascular cord | 1.27e-12 | 59 |
extraembryonic membrane | 4.46e-12 | 14 |
membranous layer | 4.46e-12 | 14 |
mesoderm | 2.09e-11 | 315 |
mesoderm-derived structure | 2.09e-11 | 315 |
presumptive mesoderm | 2.09e-11 | 315 |
chorion | 5.68e-11 | 7 |
vessel | 9.82e-11 | 68 |
circulatory system | 4.52e-09 | 112 |
epithelial tube | 6.62e-09 | 117 |
extraembryonic structure | 2.15e-08 | 24 |
vasculature | 2.52e-08 | 78 |
vascular system | 2.52e-08 | 78 |
cardiovascular system | 2.73e-08 | 109 |
musculoskeletal system | 1.04e-07 | 167 |
epithelial vesicle | 3.32e-07 | 78 |
placenta | 3.47e-07 | 4 |
allantois | 3.47e-07 | 4 |
primary circulatory organ | 5.91e-07 | 27 |