FFCP PHASE1:Hg19::chr11:63753883..63753929,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55611 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23077 | |||
|TSSclassifier=strong | |||
|UniProt=F5H6Q1 | |||
|association_with_transcript=0bp_to_ENST00000447683,ENST00000538426,ENST00000543004_5end | |||
|description=CAGE_peak_1_at_OTUB1_5end | |||
|id=chr11:63753883..63753929,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.96e-18!248;CL:0000220!7.35e-18!246;CL:0000066!9.19e-15!254;CL:0000548!1.65e-11!679;CL:0000004!1.65e-11!679;CL:0000255!1.65e-11!679;CL:0000012!6.10e-11!682;CL:0000003!5.24e-10!722;CL:0000144!2.44e-08!625;CL:0000183!4.72e-08!59;CL:0000222!5.75e-08!119;CL:0002371!5.78e-08!591;CL:0000192!1.48e-07!42;CL:0000514!1.48e-07!42;CL:0000221!2.01e-07!71;CL:0000393!2.77e-07!60;CL:0000211!2.77e-07!60;CL:1000497!8.84e-07!18;CL:0002518!8.84e-07!18;CL:1000449!9.42e-07!16;CL:0000076!9.85e-07!62;CL:0000359!9.92e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.08e-07;15!CL:1000497;1.27e-07;17!CL:0002518;1.27e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.84e-18,250;CL:0000066,4.70e-15,253;CL:0000222,8.20e-08,121;CL:1000449,1.07e-07,15;CL:1000497,1.20e-07,17;CL:0002518,1.20e-07,17;CL:0000221,1.62e-07,72;CL:0000192,4.60e-07,43;CL:0000514,4.60e-07,43;CL:0000393,6.75e-07,61;CL:0000211,6.75e-07,61;CL:0000076,7.98e-07,63;CL:0000359,9.92e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!7.34e-12!312;UBERON:0000483!7.87e-12!309;UBERON:0000025!1.57e-08!194;UBERON:0001637!8.33e-08!42;UBERON:0003509!8.33e-08!42;UBERON:0004572!8.33e-08!42;UBERON:0001869!2.58e-07!32;UBERON:0004111!5.61e-07!241;UBERON:0001893!6.49e-07!34;UBERON:0004211!9.42e-07!16;UBERON:0001285!9.42e-07!16;UBERON:0007684!9.42e-07!16;UBERON:0003220!9.42e-07!16;UBERON:0004208!9.42e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.08e-07;15!UBERON:0004819;1.08e-07;15!UBERON:0001285;1.08e-07;15!UBERON:0007684;1.08e-07;15!UBERON:0001869;6.17e-07;32!UBERON:0001893;7.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.85e-12,309;UBERON:0000483,5.19e-12,306;UBERON:0000025,3.79e-09,192;UBERON:0001637,8.33e-08,42;UBERON:0003509,8.33e-08,42;UBERON:0004572,8.33e-08,42;UBERON:0004211,1.07e-07,15;UBERON:0009773,1.07e-07,15;UBERON:0001231,1.07e-07,15;UBERON:0001285,1.07e-07,15;UBERON:0007684,1.07e-07,15;UBERON:0004208,1.07e-07,15;UBERON:0004111,2.10e-07,240;UBERON:0005423,2.13e-07,581;UBERON:0001869,2.58e-07,32;UBERON:0010371,2.81e-07,104;UBERON:0000922,5.97e-07,592;UBERON:0001893,6.49e-07,34 | |||
|phase1_expression=74.6698138801988,70.0108713123515,66.9533419455863,63.0461779624722,57.6579811811201,77.6381286449328,93.7209549222749,85.2821829126222,91.4149698699435,178.157103963594,329.362151282986,127.35131995189,124.761780702059,113.122446605483,80.1981649261556,129.758753265193,105.471542404196,102.97372274462,101.490022148425,141.342974672153,127.908433410147,168.011730712255,119.646642620782,119.217624238482,107.338956853556,103.69299159997,109.686387505128,106.96795180529,125.876568591649,86.7454439699701,124.626979269441,244.566045711395,207.530878038214,147.162096046381,51.1283523829991,73.2171547310221,69.8769045616936,76.4513663773991,68.3856565873183,74.8687503969689,97.4032312943671,87.1273961591055,89.1211464014285,93.3456692964805,83.1327076115381,89.2709345171164,106.452498902804,80.5889060522778,86.717783850629,94.9384894663096,88.8877651655979,94.5928919554341,93.7708251603602,77.4581620300591,106.98692440953,106.545164181114,92.5151848696097,97.7547157336118,112.332788500121,87.2926953646975,99.7365916246504,81.1434198459322,82.7774179129772,87.802298609735,105.055744383547,68.0862269629368,97.7830930923053,82.158313538955,72.486125660408,101.427190477289,102.917915447673,90.5962984529409,89.8753180332112,145.343636982616,156.901973374202,145.293441337305,104.46562696624,113.383554095337,76.9875560279014,150.201715951638,144.21459096934,138.642092707357,86.2381597860481,79.7362372442712,102.293564194309,93.0271885194986,98.0970168238231,99.4321721121256,101.139865536084,101.129697980749,82.53588052087,85.1493924587861,73.0141865719187,74.0159440042545,59.4139076760428,80.3321458563985,71.4056465513214,79.7811848380804,78.1285696198135,108.838408499331,105.924736655917,102.738173844437,109.10296790843,108.513785006159,121.083027972158,128.268124963917,114.279230508837,99.1426814676726,97.0242732796692,89.4542201043998,83.4577053713262,99.9820645785931,80.8161769233229,75.7140543493888,95.1273266625289,87.8147405906138,101.553430804509,112.36617467282,90.075010358943,93.3396663969603,84.6408490013344,95.9956564892858,83.8703413263194,84.727136584225,97.4459667108298,96.6051188339589,92.7874636520783,84.0700119247134,76.7553361898666,72.8466751530479,102.398883851864,97.2516246570272,107.660277072253,60.7217776006071,91.2434997357319,82.4176692887087,76.3474509169055,56.4496449551058,99.2615580222712,85.8092768180123,94.4223946201105,112.642004928033,255.370997093072,241.009887809879,104.828808150463,98.7315610486845,101.845797757451,95.1577590978314,111.539007602125,83.9493953004817,108.126749607488,123.873781695282,110.390679511215,102.320737488246,129.205826352651,142.511145724955,117.455171193688,79.5923618241533,85.3839030448105,69.2871668422867,133.739333280237,135.328434817895,129.596952558078,88.2391392830085,150.686402306007,87.8709326315345,74.3192223392622,71.283067145943,174.780966711107,150.933239871332,125.676396336259,90.9284880308836,116.334079244498,226.768907114118,68.0851573822586,102.697344959974,99.5717039715405,82.0352735341607,86.5390852563991,104.286033626469,114.221425430784,147.013858856627,76.5579147083425,58.8685636944537,69.9616945325603,95.3551794163068,87.5787405209598,107.787858643546,94.2723432027568,111.812477022712,105.062422427916,69.9909611916839,70.7384766888735,81.3210170806019,87.5821394683492,106.743021743926,76.4610780700664,77.2201857233335,74.4273457128456,167.469690596597,204.806170417628,118.845296451571,96.9668529007722,91.4311581097804,83.84472558824,83.3646804573333,67.6071265079686,123.641079644423,73.3703609967445,88.8398737485241,79.8983267371548,88.2267822488143,71.1062451745228,82.1873322745557,90.8250258898158,78.8185471566713,68.1084666076778,66.8949501746903,70.8784219545705,78.8832757275802,74.1970048359724,75.4633215725026,113.775157440337,137.601727452267,132.827360727736,135.37176902361,133.073313387389,127.758696661912,128.045725042209,115.582076342138,157.195890095516,83.2148378692892,142.369074420133,109.35095949279,158.855159555353,82.6574911896923,105.394404323759,86.1273504290064,89.8556398116282,92.5482354752571,88.6763540768447,86.4981393046852,87.3155878328836,113.258298854538,103.801155051308,113.115664142239,86.3641881910838,147.253862493618,144.05090396599,202.872021712048,59.5748663662605,53.0726697005918,56.1250411347334,93.1487139764913,137.132108975572,102.254414937921,160.345166982002,184.338875342496,128.576555714476,157.215179879183,84.3843510753741,115.432761166033,85.1554917949112,114.423309710401,102.85001615058,97.736085134247,109.26458096808,90.7512306159034,161.991901581651,179.423607877828,97.7481514166967,81.1994800033155,78.0313602015823,199.653066391835,122.626953585167,159.638759494927,75.4082761157983,120.903718421808,215.461065690849,70.4508430191199,71.0550862486734,63.8570595865578,70.6187771743111,59.2077012769722,126.487805430001,200.161934992538,246.156639141099,183.047517244295,102.827492703324,131.85060239348,109.757350130142,101.590762416897,93.2954547303219,87.1992218411096,81.1826374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| |||
|short_description=p1@OTUB1 | |||
}} |
Revision as of 08:19, 11 January 2014
Short description: | p1@OTUB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OTUB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000447683, ENST00000538426, ENST00000543004_5end |
EntrezGene: | OTUB1 |
HGNC: | 23077 |
UniProt: | F5H6Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.84e-18 | 250 |
epithelial cell | 4.70e-15 | 253 |
mesodermal cell | 8.20e-08 | 121 |
epithelial cell of nephron | 1.07e-07 | 15 |
kidney cell | 1.20e-07 | 17 |
kidney epithelial cell | 1.20e-07 | 17 |
ectodermal cell | 1.62e-07 | 72 |
smooth muscle cell | 4.60e-07 | 43 |
smooth muscle myoblast | 4.60e-07 | 43 |
electrically responsive cell | 6.75e-07 | 61 |
electrically active cell | 6.75e-07 | 61 |
squamous epithelial cell | 7.98e-07 | 63 |
vascular associated smooth muscle cell | 9.92e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cell layer | 4.85e-12 | 309 |
epithelium | 5.19e-12 | 306 |
tube | 3.79e-09 | 192 |
artery | 8.33e-08 | 42 |
arterial blood vessel | 8.33e-08 | 42 |
arterial system | 8.33e-08 | 42 |
nephron epithelium | 1.07e-07 | 15 |
renal tubule | 1.07e-07 | 15 |
nephron tubule | 1.07e-07 | 15 |
nephron | 1.07e-07 | 15 |
uriniferous tubule | 1.07e-07 | 15 |
nephrogenic mesenchyme | 1.07e-07 | 15 |
anatomical conduit | 2.10e-07 | 240 |
developing anatomical structure | 2.13e-07 | 581 |
cerebral hemisphere | 2.58e-07 | 32 |
ecto-epithelium | 2.81e-07 | 104 |
embryo | 5.97e-07 | 592 |
telencephalon | 6.49e-07 | 34 |