FFCP PHASE1:Hg19::chr11:119211162..119211175,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_AB590791_5end | |||
|coexpression_cluster_id=C2099 | |||
|description=CAGE_peak_2_at_AB590791_5end | |||
|id=chr11:119211162..119211175,- | |||
|ontology_enrichment_celltype=CL:0000115!2.21e-16!35;CL:0002139!2.54e-15!24;CL:0002078!4.79e-14!44;CL:0000071!7.55e-12!18;CL:0002546!7.55e-12!18;CL:0000213!8.00e-12!57;CL:0000215!8.00e-12!57;CL:1000413!5.90e-09!9;CL:0000222!3.96e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.15e-17;24!CL:1000413;7.08e-16;9!CL:0000115;9.68e-16;36!CL:0000071;1.43e-14;18!CL:0002078;1.36e-12;45!CL:0002544;7.64e-11;6!CL:0000213;1.33e-09;58!CL:0000215;1.33e-09;58!CL:0000136;4.79e-08;13!CL:0000149;5.54e-08;4!CL:0002615;4.26e-07;3!CL:0002586;7.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.83e-18,36;CL:0002139,7.95e-18,24;CL:0002078,8.40e-18,45;CL:1000413,4.40e-16,9;CL:0000213,9.90e-15,58;CL:0000215,9.90e-15,58;CL:0000071,1.23e-14,18;CL:0002546,1.23e-14,18;CL:0002544,5.81e-11,6;CL:0000136,1.88e-10,15;CL:0000149,5.77e-08,4;CL:0002615,4.31e-07,3;CL:0002586,7.31e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.43e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-14!115;UBERON:0001986!7.55e-12!18;UBERON:0004638!7.55e-12!18;UBERON:0004852!7.55e-12!18;UBERON:0002049!1.63e-10!79;UBERON:0007798!1.63e-10!79;UBERON:0000055!1.93e-10!69;UBERON:0000477!2.54e-10!286;UBERON:0004111!3.38e-10!241;UBERON:0006914!3.41e-09!25;UBERON:0003915!5.90e-09!9;UBERON:0004700!5.90e-09!9;UBERON:0001917!5.90e-09!9;UBERON:0000487!1.88e-08!22;UBERON:0001981!2.93e-08!60;UBERON:0007500!2.93e-08!60;UBERON:0004537!2.93e-08!60;UBERON:0006965!2.93e-08!60;UBERON:0000483!7.00e-08!309;UBERON:0000119!1.67e-07!312;UBERON:0000475!1.67e-07!365;UBERON:0000025!1.73e-07!194;UBERON:0004872!2.70e-07!84;UBERON:0001009!3.10e-07!113;UBERON:0004535!5.33e-07!110;UBERON:0003075!7.12e-07!86;UBERON:0007284!7.12e-07!86;UBERON:0000468!7.19e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;7.08e-16;9!UBERON:0004700;7.08e-16;9!UBERON:0001917;7.08e-16;9!UBERON:0004638;1.43e-14;18!UBERON:0001986;1.43e-14;18!UBERON:0004852;1.43e-14;18!UBERON:0006914;4.57e-13;25!UBERON:0004457;1.12e-12;9!UBERON:0000042;1.12e-12;9!UBERON:0003688;2.36e-11;6!UBERON:0002358;2.36e-11;6!UBERON:0003684;2.36e-11;6!UBERON:0001178;2.36e-11;6!UBERON:0000487;2.95e-11;22!UBERON:0000490;2.17e-08;33!UBERON:0001781;7.22e-07;3!UBERON:0001782;7.22e-07;3!UBERON:0000966;7.73e-07;5!UBERON:0005388;7.73e-07;5!UBERON:0001802;7.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,4.40e-16,9;UBERON:0004700,4.40e-16,9;UBERON:0001917,4.40e-16,9;UBERON:0004638,1.23e-14,18;UBERON:0001986,1.23e-14,18;UBERON:0004852,1.23e-14,18;UBERON:0006914,3.66e-13,25;UBERON:0003688,1.75e-11,6;UBERON:0002358,1.75e-11,6;UBERON:0003684,1.75e-11,6;UBERON:0001178,1.75e-11,6;UBERON:0000487,2.61e-11,22;UBERON:0000055,4.98e-10,68;UBERON:0004457,3.57e-09,12;UBERON:0000042,3.57e-09,12;UBERON:0002049,1.18e-08,78;UBERON:0007798,1.18e-08,78;UBERON:0007500,2.48e-08,59;UBERON:0001981,2.48e-08,59;UBERON:0004537,2.48e-08,59;UBERON:0006965,2.48e-08,59;UBERON:0001781,4.50e-08,4;UBERON:0000966,4.66e-08,6;UBERON:0005388,4.66e-08,6;UBERON:0001802,4.66e-08,6;UBERON:0001782,7.31e-07,3;UBERON:0005424,7.31e-07,3 | |||
|phase1_expression=6.54042165374004,5.99481466894753,10.1487170949099,10.007329835313,18.3254048715188,2.61701557230111,0,1.26343974685366,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,2.1686349143074,2.00535164254356,2.02785126545153,0.795285947051099,0.973269740605272,0,0.221729397462564,0.087834785693126,1.37528029272598,0,0,0,0,0,0,0,0,1.98762407366705,6.881876760849,3.12426451446835,15.2633144319483,14.6824802673467,8.80377734208216,2.92592953151535,3.10100111003195,3.91342888955381,1.67360306382335,0.805658634218294,0.760272105718513,2.4406205754817,1.10298924103761,8.1014194788176,0.446498641420399,1.12264686313085,0.563057402416611,3.06633274931766,0,3.11442964681692,0,0,0,3.47880366186723,0.12663051166458,0,0.860509862246441,1.06400514659507,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0.408308342509787,0.122834317311768,0,2.37600571456411,2.22540236350701,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0.30648779579902,1.05166641234618,0.567160915800105,0.717558542755448,0.640672166455702,0,0.300091096084402,0,0.257640540045629,0.37223371266318,1.0126579934476,0.584622030967192,0.504867548488229,0,1.13152239773168,1.06502877754984,0.806016785821122,0.508681776931463,0,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,2.80483547606892,2.057870056657,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15493158208859,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,1.20137223137567,0.285826432630578,0,0,0,0.517086863031111,14.3062578340753,0,1.06375246633948,1.04007436911366,0,0,0,0.57191197463259,5.42621605391443,0,0.977208552881205,1.06617584622764,0,2.1100756394171,0,3.09916272664377,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.895304816199478,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0.500170521059677,0,1.45579603071565,1.07057393278297,0.788512075169673,0,0.902838299183157,6.82222512167955,3.10419213877515,0.664225598535437,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,3.96972492510043,2.455391572609,3.64858122762996,1.79394808957981,5.11707249066703,2.0911009748669,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.114814448164607,0,1.18011973463482,0,0,0,0,0,4.54933536283586,0.510281115829547,1.0795795805107,1.54227252690289,0.270946437543853,0,0,0,0,0,0,6.92415337814251,4.26419039409617,12.3643789972435,0.9273691048295,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0.890320356467374,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0,0,1.33441135746677,0.511795582622668,0,0,0,0.899362287916574,1.09814811894422,0.353437207037059,0,0,0,0.975267478179181,0.487426979262569,0,0.272999822815972,0.424216295861138,1.13008116620243,0,0,1.31535265576129,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0.143411352204052,0.392996164052485,0,0,2.74439925886963,5.59801318031833,0.379473173765715,0.349934720244983,0,1.34060455107157,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.39473591775749,0.276283915531148,0,0,0,1.55519793830904,0.0898683511473268,0,0,0.591860433821602,0,0,0.969332746095218,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.658156191461918,0,0,0.692552326534174,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,1.21322039365219,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,1.76922422959766,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.51595809741485,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0.126621591911757,0.195551382734803,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,2.23425921017803,0.458320848023367,2.15361907373044,0.199679000498991,0,1.11585728720936,1.14211903227435,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0.86686278029118,0.944182586429966,0,0,0,0.714695326373367,0.662091970365432,0,3.25799761052228,5.18532894720761,0.979762080328227,1.19730191562487,0,0.170388021785422,0.566560457600628,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,1.06787412567695,2.04365596629566,7.45630299624952,0.992332043623902,0,0,0,0,1.0027595760908,0.612691153526923,0,0,0,0,0.1251909307065,3.44045517414043,4.54809111301094,1.1177352529449,0,0,0,0.2854653335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| |||
|short_description=p2@AB590791 | |||
}} |
Revision as of 10:45, 11 January 2014
Short description: | p2@AB590791 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB590791_5end |
Coexpression cluster: | C2099_Adipocyte_Osteoblast_Mesenchymal_Endothelial_Renal_Retinal_Preadipocyte |
Association with transcript: | -51bp_to_AB590791_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.83e-18 | 36 |
endothelial cell of vascular tree | 7.95e-18 | 24 |
meso-epithelial cell | 8.40e-18 | 45 |
endothelial cell of artery | 4.40e-16 | 9 |
lining cell | 9.90e-15 | 58 |
barrier cell | 9.90e-15 | 58 |
blood vessel endothelial cell | 1.23e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.23e-14 | 18 |
aortic endothelial cell | 5.81e-11 | 6 |
fat cell | 1.88e-10 | 15 |
visual pigment cell | 5.77e-08 | 4 |
adipocyte of omentum tissue | 4.31e-07 | 3 |
retinal pigment epithelial cell | 7.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 4.40e-16 | 9 |
arterial system endothelium | 4.40e-16 | 9 |
endothelium of artery | 4.40e-16 | 9 |
blood vessel endothelium | 1.23e-14 | 18 |
endothelium | 1.23e-14 | 18 |
cardiovascular system endothelium | 1.23e-14 | 18 |
squamous epithelium | 3.66e-13 | 25 |
omentum | 1.75e-11 | 6 |
peritoneum | 1.75e-11 | 6 |
abdominal cavity | 1.75e-11 | 6 |
visceral peritoneum | 1.75e-11 | 6 |
simple squamous epithelium | 2.61e-11 | 22 |
vessel | 4.98e-10 | 68 |
cavity lining | 3.57e-09 | 12 |
serous membrane | 3.57e-09 | 12 |
vasculature | 1.18e-08 | 78 |
vascular system | 1.18e-08 | 78 |
epithelial tube open at both ends | 2.48e-08 | 59 |
blood vessel | 2.48e-08 | 59 |
blood vasculature | 2.48e-08 | 59 |
vascular cord | 2.48e-08 | 59 |
layer of retina | 4.50e-08 | 4 |
retina | 4.66e-08 | 6 |
photoreceptor array | 4.66e-08 | 6 |
posterior segment of eyeball | 4.66e-08 | 6 |
pigmented layer of retina | 7.31e-07 | 3 |
presumptive retinal pigmented epithelium | 7.31e-07 | 3 |